© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0212500.1
GAAAGGCGAAGTTATAAAGTAGCGTAAAAAAATTAAATGGAACATTTGAGATGTAAACAGAAATCTCAAATTATTGTCCTTTTATCTCAACATAACCACTTTACAGATACCCAAGCTGTAATCTTTGTTATACTCATGAAACTTTGAGTACTTCAGGCAATCAGTAATTTCATCCACAATGGGCACCACCAGAAACTTGGCAAGTCCATGGGCGATGGCTGCGAAACATGGGTGGCGGGTTACATCTTCAAATTTCGTCAAGGAACCTGTGTTCTAATTCCATTACTAATTACATCCCCTTCACTGACCAAAACTTATAGTCAACCTTGAGCAGGATGAGCTGCTACAGACCCATGGAAGATGTGCTCCAATATGAAGGACCATCATAAGCAAGGTAGAGCTATTTGTTTTTTCTTCAATTTAGTGAGTCCTACTTTTAAGTGTTTAGGATACTGCTTGCAACACTATATGCGATGACAGCTACGGAAGAGTCTCTCAGTGCAAGCATAGGGGGGCAAAGCTTTTATACTCTATGCAGCCCTGATACAAAAACAAAATAAAATGATCACACATAAAATCAATAATCAAGCATCTAGGAAACTAATCAGATTGTTAGCTGGAGCACAGGGGGTGCCATTCTTCCACCATCAGGATTTGATCTTCCTTGTCAACAAGCAATTATCCCACAGCGTGTACAGATCAAGTGCTAGCAACATAACCTGGAGAAAGATTGGGGCAGGTTGGGGATGGTAGCTAGCGGTGAGTACGGGCTCCGGTCACCGGTTGGAGTCACAACAACACCAAAATGAAGCAGACCAAGGCCAGCTTTCAGACTCCAGATGAACATATGGCAACTTTAATTTGGTCAGTTTTGCCCTCCAATTATTGTGGATAATACTATAAATTAAATATTTTGAGAATAAACTTAACAAATAGTAGAGCTTAAAATAAATGGACTAAAAAAATCAATTTCTGGAGCTATCCATATTCCACTATAGGAACTAAATTCTAGATCACTCAACTCAACTCATATGTCATTTGCAAACATCTCGACCTTCTACATACAAATCTAAAGATCCACTTGTACTAATTCAAGTTCATTTGCCAAGCATATTAAACGGATAGCAAATGCCAAGATGCAGTATGAAAATAGCCACAAAGAATGGACTGAAATCACTGGATTTTACATGGGTGTAAAATTGGTACCCTTTTGTTGCTTTCAGATCTCATAAGCTGATGTTCTACTTGATCTGGACAGCATGTGCCTCACTCCACGCATCAATCAAACCAAATGAGACAAGTCTTCAGTAGGTGGGTTGGAGTGGACTGCTACCTCATGCGTGACCTGGTTGTATCATTGACGACCGGCTGAAGAGACGGGATATCCAATGGAGATCACTGCCAACACAAACTACTTCAGTTCATTAAGTCCTTCCATAAGCATGGAAAATATGATCCAAAATGGTGGCAGAACATGCAAACTGGAATTGCGGGAGCCTCAATGGATGACCATATGTTCAAAAGTTTTGCTTAAATTGACGAAGTTCAGTAGAAATAGTGTTTTGTACCTTCAGAATTACACTACTACAAATGCAAAGGTTAAGTAGAACACATCAAGAACCATTGAATTGTTAATTTGAAAGCAGTAAACAATCAACCTGAAATTTGGTTAGTATGACATCAATACAAATAGTCAAATTGTAAACAAGAGATGATGCTAGTGCTAGTTAAACATTTCATCAAACACATTGCAAGCATGAATATGGAACATCAACCTCAACTGTTGTTGGTGTCCTTATCTGCTAGCATCGATGATGTCCAGCGGCCCTGGTCCTGTGCCCTTGTTCCAGCGCATCCCTGATAACAACAACAACGAAAAATCATATAGGATGTTGACGATGGCAGCAGTGGTGGCGCGGGTGCGGTCCTAGGGGTCCTCGGCTCTGCCTCCGGTCGGCACCCTCTCATGCGACCGCGCCAGCGGACTGCTCCTCCCTGGAACGTCTGTTGACGCTCGCCTCTTGCCCAGTCAACCTCGCCGACGCTGACGTCCTCCTGGCTTCATCTCTCCACCGCCCACGGGCCATGCGCAGCGACCTCTAGCCCTCCTCCAATGGCCCCCTCTCCTCCTCCTAGCAAGAATCTCCGCCACCTCATATCCCCTTTCCGGCGGCGACGCCTGGATGTCCGGCCTGCGCACGCGAGGAGGCGGCGGGGTAGGGCGAGCAGACCCCGCCTCTCTTTCCTCTCCATCACGGCGCGGCGCGAGCAGGGAAGCAGGCAGCGGTGGGTAGGGTGAGGCGGCTCCGGCGGGCGAGCACGTGAAGGAGGCGAGCAGCTCCGGCGGGAGGCGGCGGCAGCGGGCTGGCGCGCGCTAGGAGGAGCTGAGCGGCTCCGGCGGGAGGAGGCGGCGGCGGGCTGGCGCACAAAAGGGAGCGTTCCTTTTTTTTTTTTTTTTTTGCTTTGACCGATCCTAACTGCTGTTTAGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0212500.1 | 3 | 12517870 | A | C |
| Osa03LNT0212500.1 | 3 | 12518927 | C | T |
| Osa03LNT0212500.1 | 3 | 12519059 | T | A |
| Osa03LNT0212500.1 | 3 | 12519517 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0212500.1 | osa-miR2873c | Translation | 3.5 | 10.971 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR160a-5p | Cleavage | 4.5 | 23.921 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR160b-5p | Cleavage | 4.5 | 23.921 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR160c-5p | Cleavage | 4.5 | 23.921 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR160d-5p | Cleavage | 4.5 | 23.921 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR399d | Translation | 5.0 | 15.281 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR399j | Translation | 5.0 | 15.281 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR160e-5p | Cleavage | 4.5 | 23.921 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR1854-5p | Cleavage | 4.0 | 16.305 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR1320-3p | Cleavage | 4.0 | 13.156 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2121a | Cleavage | 5.0 | 19.449 | 1 | 24 |
| Osa03LNT0212500.1 | osa-miR2121b | Cleavage | 5.0 | 19.449 | 1 | 24 |
| Osa03LNT0212500.1 | osa-miR2864.1 | Cleavage | 5.0 | 21.705 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2871a-3p | Cleavage | 4.5 | 11.168 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2871a-3p | Cleavage | 4.5 | 17.263 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2871a-3p | Translation | 5.0 | 10.154 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2871b | Cleavage | 4.5 | 11.168 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2871b | Cleavage | 4.5 | 17.263 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR2871b | Translation | 5.0 | 10.154 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR5490 | Translation | 4.0 | 10.109 | 1 | 21 |
| Osa03LNT0212500.1 | osa-miR5519 | Translation | 4.5 | 11.43 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0212500.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0212500.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0212500.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0212500.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0212500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212500.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0212500.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)