© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0212600.1
CCTGAATATCGTCAGATAATTAACGATGTTTCTACCTTCGGTTTTCCTTTAACAACTGATCAGAGTATTGCTCTGCAAAGATTTTGCAGTGGCCGGGATACAACATAACATTGGCTTAGGCAAAACGGTAAGCAAAAACATTCAATTGAACCAAATCTGAAGGTTGTAGTAGTCCGATCAACCAATAGCTCAGTCTCAATGGCTCACTGGCCATGATCAAAACAAGGCTCTGCCCGACAGTCAGGCTGCTCCTGCTCCTGTATGAAGAAATATCCGAGATAGAATCATGGGGTTCTCTTCAGCTAAGAATTTTATTTAGCCCATCATTCACTGTGCGATGGGCTTGGCAACAAATTAGTCGCTGCTGGCACTCTTTCTGGCCATTTTTACTCGGTCGTAGTCCGCTTTCCACACCCTATAAGCGCTCCTAACTTCCTCCAGCTGTGGATCTGGTATGCTCGTGAATCGGTCCAAGTTCTCCACCCATTCTTTCCATGGAGGCATGGATGCATCCAGGAAGTTTGCTAGCTCTGGAACAAGAGCTGCCCTGTAGAATTCCATTACCCCCTTCTTGACTTCTTCAGATTCATTCATTGATTGGATCCCAGGGCGAACTATAGTCCCTTGCTTGTTCCTCAGGCAGAAACTGTTATCTCTAAGCACCAAAACTTCAGAAGGGGCAATTGGTAACACAATGCGAGAAAACTTTGCAAGAGACAGTGCTATAATATCTTTGGGTAGTAATCCACGCTTAACCGCCACCGAAGTACCAACCATCTTCCGGATCTGATGCAGCATGAAAGATACTCCTGATATAGTCAATTCCACAAATTGAATTCCTGATGAAATCTGGAGCTCTCCACAGGAGAATGTGAGGATATCTCTGAAATGTGAAGCATTCAGTCGATCATTTTCATCAGGCTCATGAAGCCACCTAGCTCGAATCTGAACCTGCTTCTCAGAAAATTCGGGATTATCCTTATAACTGTCTTCTGGTACACTAGAACCAATTATCGACGAAGAGTTCAAGTCTTCTTCATCATGGTCTGAAGTAGTTCCGTCATCAGAGGAGCTTTGGTCCAAACTCATTTCAGTGGGCATGGAATTTACAGCTGAGCTTGCCCCTTTTACCTTACGATGCCTTCCTGCTAGAACTTTCCTATACTTGGCACGAGCAGTGTAATTATGAAATGGATGGTTTCCCTACATGTATAACCAATTTAATGAAACTGTGCACATGCAGAATAAACTGTAAAATGAGAGATAAAAATACTCTGACAATGTCTATAATTACTGTATTGAGTAAAAAGGAAATGCATAACAAACAATTCAGATGGTTCAGCAAAACAACTCACCTGGGCTATGTACCAATCAGATGTTTCTTGGGGAAAAAGCCCAGATGTCAAAAGGTGAAATTATTACCAGGATCAAACTGGGCTGGCCTTTTTGCAAATTCACAATTCACATTGGGTCCAATACTCCAGCAACTGTTATGCAAGAGTGTAATGAACCAGGAGTCCTTCATCTATTTAGTTATACCACCCCTACATGGTTCCTAAACTTAAATTTAGTCTAGTATTTAGATGAACTTGTTAAACTCTTCACTGAAGTACATCCATCATCAAATAATTGGAAATCGACAAGGTAGGACACAGTGATGCTACTGGGCCTGCTTGACCTTCCCTCTTGGATTCCAAGCATGCTAAAATGTGCCAAATAAGTTTTTCCACTTCATTTTTTCCATCTCACGAATTGCAGCTGGATCTAAGCAAATCCAGGAACACGCAAGAGTAAAATTCAAAGTCAAGGTCCACAATGGATTGACAGGATATATTTATAACCTCTGGTGTATTTACTGGTCATACAAACTCATGTTTTATTCTTATTTAACTATGTGGCAGTATCTGGGTGTCTCCATAAACACATCTGCTATCAAACAATTTATCAAAGAGATCATATGTCATGTTCTTTTGCACAGTCTAAGCACAGAATGCAGGCGATATACTTGATCATACACATACCTCAAAACCTTTCAGAATGCTATTGAATTCTGACAGGTGTTCCATTACTTCTTCAGAGCTACAACCACCTTTAATTCCAATTATTTCAGCAGGAAGAAGATACAAGTATTCCCGATACAAGCATTCCCTCCTCACATCGAAACTCCTTTGAGCAGGCAAAACACTGAAAACTCTAACATTGTCTGGCAAATTTGAGTTAATGAAGTTTGAAAGAGCAATGCCATCAGGATCATTCTCCCATGCTCGATCAGGGATTTCCATTTTCAGAGAGATCATTGTGGCCAGTGAATGTACCTGAAATTAGTTCGTTCCCTTTATCAGTTCTACTACTCCTTTCCCAGCCAACTTTTTGCAGCTTCCCATAATTACTCTCAAGAATGCCCCCAGCCTTGAAGATGGCTGTTTCCAAGACTGACTCAATTGCTGAACGAAGCAGCAGCACCTAGCATCAACATCATACAAATCAGAGCTTACTCGAGTCCGCGCTGAGCTCCCGCTGCTTCTGAAGACCTCGGTACTCCGTGCCGACGTAGCCTACGCGGAGCACGACCCTCTTCTTCCGCGCGGACTCCCACCTCATCCCGCCGCCCCAATCGTCGGAGCAGGTGGTGGCAAGCGGAGGCGAGGGTGGCGCCGCAGAAGCCGCGGCGCCGCCGGGGTAGGAGACGCACGGCGTAGTACGGAGGAACCTCGGGTTCACCCGGCGAGAGAGGAGAGCGGAGGAGTAGGGCCTCCAGAGGCGCCACGTCGCCGCGGCGGCGGCGGCCATCGGCGGCGCGGGCGGTAGTTCAAGCAGAATGGAAGAGAGACGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0212600.1 | 3 | 12592075 | A | G |
| Osa03LNT0212600.1 | 3 | 12592477 | G | A |
| Osa03LNT0212600.1 | 3 | 12594763 | T | G |
| Osa03LNT0212600.1 | 3 | 12593745 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0212600.1 | osa-miR5816 | Cleavage | 4.5 | 12.325 | 1 | 24 |
| Osa03LNT0212600.1 | osa-miR6248 | Cleavage | 3.0 | 10.053 | 1 | 21 |
| Osa03LNT0212600.1 | osa-miR171f-5p | Translation | 5.0 | 17.032 | 1 | 21 |
| Osa03LNT0212600.1 | osa-miR2864.2 | Translation | 5.0 | 11.854 | 1 | 21 |
| Osa03LNT0212600.1 | osa-miR2864.2 | Cleavage | 5.0 | 13.096 | 1 | 21 |
| Osa03LNT0212600.1 | osa-miR3982-5p | Cleavage | 4.5 | 22.079 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0212600.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0212600.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0212600.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0212600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212600.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0212600.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212600.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)