>Osa03LNT0213000.1

ATGTTCGTCATTTTGCTCTGGGTCAGAAATCAAGTTTTCAAGTGAACCATGAAGCGAAGTGAGCCGCTTGGCCTTTTCAGTGTACGGAAAGTATATAGACATGTCTGCTCCTGGAGAGACTATGTTGAACTTTGGGTCAAAAACATCAATCCCATGGACAATACGATACAGACCAGGAAGAGTAAATGCAGTATGGCTCTCATACTGTCCAACTGTGTTTTTGCTGAAGAAAAGGACAAAATTAAGAATCAGAATCAGGATACCCTAAGAATAGCCATGAATAACTACTAGGCATGTGCGCCAGATTTCACATGCTACTATGCGTGAACAAATCAATAATCGAATAATGAAACGTGATGAAAAAAAAACTTTAACAGCCAACAAGGCAGAAGAGAATAAAACCTGCCAGCAATTTCCTGGTATGTGCTGGTGATTATAAAATCAGCATTGTTCATGGCGATTATATCAGCTGTGAACTGACAGGAGAAATGGTACTTCTCATCGTACTTCGTCCAGTATATGTCTGAGTGGTGGGAACTTTTAATAGTAGTTAACAAGGACTTACCTGGGTAATTCCCATCTTGTAAGATAGCAATGATGCAACAAGATTAC

Explanation	CPC Score
noncoding	-1.04214

Transcript ID	Chromosome	Locus	Ref	Alt
Osa03LNT0213000.1	3	12677144	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0213000.1	osa-miR5506	Cleavage	5.0	19.833	1	21
Osa03LNT0213000.1	osa-miR444d.3	Translation	5.0	15.13	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0213000.1	3	nan	Physiological trait	Eating quality	RZ574	RZ284
Osa03LNT0213000.1	3	ccf3b	Physiological trait	Source activity	RM16	RM282
Osa03LNT0213000.1	3	ccfs3	Physiological trait	Source activity	RM16	RM282
Osa03LNT0213000.1	3	qLEI3	Resistance or Tolerance	Submergency tolerance	RM7249	RM3803
Osa03LNT0213000.1	3	nan	Resistance or Tolerance	Other stress resistance	RM4512	RM8208
Osa03LNT0213000.1	3	nan	Resistance or Tolerance	Other stress resistance	RM4512	RM8208
Osa03LNT0213000.1	3	qLEI3	Resistance or Tolerance	Submergency tolerance	nan	nan
Osa03LNT0213000.1	3	qGL3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0213000.1	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0213000.1	3	qTA3	Physiological trait	Eating quality	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus