© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0213300.1
CACCAAAAACAACGGAACTTTACAGAAATCTGGTGTTATCAACATACAGGTTTACATACTGACAAAACTCCAGCTTCTCACTGGAAAAATATATTTCCTATCTTTGCCGGCAACTTCCAACAATGTATACACGATTGACAATTTAGTCTACGAATATCAACCTAAGTTAATCAGCTGTTCACCAAAAGGAAAAGGATCCATATTTGATTAGTCAGCTCTTAATCTTAAGATTTCCATCACTGTTCTCTTTCTGAAATATTCCATGTTTTCCTGACTAAAAGACATGCTCAATCCTCTGCTGTGGAAATCAATGTACTTGAGCATAAACATACCACAGTCCCACCCATTTTGCTGCAAAGGAATATCATCAACTAACTCTTCGTGCCAAGTGTTTGTGTCGATCTCTTTATTACTCTTGTCCTTCACTTCCTCTGCAATATATCTAGCCTGTGAGTGGCATGCACAATAAAATACAGGTAAGCCCACTCAAATCTGTAACTGCAAGTATTTGATGGATTAAACAAGCTTAGCAACACATTAATGAAACACCGAAATAACTACGAACATGCAAATTCCCCTAGAGCATAACACATTTAACAACCTTTTTTTTAAAAAAAATAAAATGCCATGCAGGAAATAGCAATAGAAGGGGGTACTACTTTTTGAGTGCCCCAGTTGTATTTTTTCTCTACAGCTATAAGTTTACCAGCACTCTTGGTACATGATGATCCACACAACCAAGAGAATCAAGGTATTGGAATGTCCTTTCTTTCATGTTTATAACTGCTAAGCACCAATGGACATCTTTATGTACAGGGACAAAGATTTTATCACACTCAATAAGCTCATAACCCAACCTCCTGCGGGTAGTCCATCTTTTAACAGATTTGTAGTCATAGCCATTTTTTCCGCAAGCAAGCTGAACCAAACGACCAACAATTCAGGGAGTCAATGAAGATTAGCATTTACTTGGTGATCAGCAATTCAGCATTCACAAATGAAAATGAAATGGTAAAATTCATAATAAAAGGATATCAAATGAGTGGATGAAGGCAAATGAAGAACTTCCTAGAATTTCCCATCCCTAACCAAACAGGCCAACACAATACTGCCCCCCAAAGAGAAGAAGTAATGGTATTTTGCGAAGCTAACACTTGGGTGGCATTTCTCCAAACATCATCCTTTGGAATGGAGTGATATTTTAGAAATCTTCAATGAACAATGAAGCAAGGATAAACTGAAAACATAAAACTGTCTACCATTTCCACAACAAATGTCTCGAATAAGTGATAACAAAACTTAAGAAAACCAAAAAAGCAAATGGAGAACTAAGCCCTCCGTTTAGAACTGTATCCTGTTGTCGTATGACTGAAGTCAAACATATGCTGCTATTGACTGTTCCTAGAGTAAATATAGGGCATATCATATTTTAAAAAAAAAATCTTTAGGAAAAGAGCTTAACCATTGATTGCTCATAAATTACATTCGTAATATCTGCGCAACCAACATTTTATGAAAAGCTCTCAGAAATATGAATCTATCAGTATAATTCTGATACACCAAATATATTTATGATTTGAGTAATTGTTGGTCAGAATCTATAAAGTTTGACTTTTCAATATATAATATGCCCTATAATTTTCTATGGATGAATTAATATATACCTAAATGAGCCAAATGAATAGCATATTAGTTAATATGCCATAAACACAAGCTAATTGAGTATTTGTGTCCAATTAAGGCTCCAAAGCCAGTAATGATGTTAACCTGAGAAACCCATGAAGATATCTGGACAGTTATTACCTATATACCTCCTGAGGGAAAAACTCTAAAAATGTCCATAAATTAATAACACAACTGAAATATAATATAAATGTTCCTACAGTGATATCATATTTGAACACTCATAAGTTCATTGCACCAAATCCTTATAAACCAATAATACACCAGAAATGCTAAAAAAAGTTATAAAGTACAGAGACGATAAGAACATTTAATATGAATACGAAGATAGAATACGTGAAAGCAAAAGAAGCTTATGATCTAACCTTCTTATAAAAAAATGTATTAAAGAAATGGCATTTCAAAAACCTTTTTGGTTCTCTTGCCTCTCTCTCCTTCAATAATTCAAGGTACAAATTAATGACCTCATCATTTAACCAGGCAGTCAGTCTCAAGCACCGGAACTTCTCTCTGCTAACTTCAATGTTGGAGGGCTCATGCAGTGCTAGGATTTCAGTACTTGAACCCCTACCAAACAAACAATTATGAACTTCATTTTCCTCTTCAGCAGTTAGAGGTGTAAAGAGTTCAGACAGGTCCTCCTTGGGTGGCTCAGCCGCCTTCCGCAGCTCGGCGAGTTTCTCCTCTTCTAGATTCACCAGTGAAGCGAGCTCGCCCAGCCTCTTGTCGTGGCTCCTCATCCTCTCGAGCGCCTCCTTGTAGTACGGCTCCCTCTTCACCCGCGGACGCGGCGCCGCGGCCTCCAGGGCGGCCTTCCTCGGGTCCCCGACCCTCCGCCTCACCACCAACCGGGGGCCAAACCCCGCGTCGTCGTCTTCCATGGCGGTGGCCACCGAGAGATCCCGCGACCGGACGTCGACCCAGCCCCTGTACACCCCGAGGCCGGCATCGTCGTGCCTAGGTTTACCCCGGAGGAAGGAGAGGAAGCCCCCCATGTCGAACGCGGGGGACGACGCCGCCTCGGGCGGGATCGGCGGGGAGGGGAAGGCCGCCGGGCAGAGGCAGAGGCGGCGGCGGCGGTGGCGCTGCGGGCCGTGGAAGTGGGAATCGTCGAGGGGGCGCTTCCGGCGGCGGTGGGGGAGGAGGAAGGGGGAGGCGAGGGCGGTCATGGCGAGGAGGAGGAGGGGGATAGGGCTAGGGCTAGGGCTAGGGCCATGGGGGTTGGGAGCATGCCCTAGGTTGGCGCGGCGGGGGTTTGAGCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0213300.1 | 3 | 12824097 | A | T |
| Osa03LNT0213300.1 | 3 | 12824633 | G | C |
| Osa03LNT0213300.1 | 3 | 12824835 | C | T |
| Osa03LNT0213300.1 | 3 | 12825055 | T | A |
| Osa03LNT0213300.1 | 3 | 12825880 | A | G |
| Osa03LNT0213300.1 | 3 | 12826249 | T | C |
| Osa03LNT0213300.1 | 3 | 12827370 | A | G |
| Osa03LNT0213300.1 | 3 | 12827537 | C | T |
| Osa03LNT0213300.1 | 3 | 12827548 | C | T |
| Osa03LNT0213300.1 | 3 | 12825054 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0213300.1 | osa-miR5827 | Translation | 4.0 | 13.614 | 1 | 21 |
| Osa03LNT0213300.1 | osa-miR7694-5p | Cleavage | 4.5 | 18.492 | 1 | 24 |
| Osa03LNT0213300.1 | osa-miR414 | Translation | 5.0 | 6.745 | 1 | 21 |
| Osa03LNT0213300.1 | osa-miR529b | Cleavage | 4.5 | 22.496 | 1 | 21 |
| Osa03LNT0213300.1 | osa-miR1879 | Translation | 4.5 | 13.369 | 1 | 24 |
| Osa03LNT0213300.1 | osa-miR1879 | Translation | 4.0 | 7.942 | 1 | 24 |
| Osa03LNT0213300.1 | osa-miR5145 | Cleavage | 3.5 | 24.611 | 1 | 24 |
| Osa03LNT0213300.1 | osa-miR5492 | Cleavage | 3.0 | 7.049 | 1 | 21 |
| Osa03LNT0213300.1 | osa-miR5521 | Translation | 5.0 | 13.585 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0213300.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0213300.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213300.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0213300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213300.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0213300.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)