© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0213800.1
GTCGCATAACAACATTGCATTGCATGGTAAGTTAAAGGACGGTAAAATGGATACAGCCACTTGCTGCTCCTACTATCATCATCAAGCTAAGCTAACATATCCACCATGGATGATCAGTGCATCATCAACGAGAACATTAAAAAAAGAAAACCCTGTTGTTAATCACAGAATGAATTTCTCTAAAAGTACGGTGTACTGCCTCTCTCGTTCTTTTCCTCTCCCGGTACAAGAGCCGCACCTACGCAAAGCCTTCACATGGCAGCAACACGCAACTCCCTCTAAACTACAGCAGCTCACCTTTGCATATCTCCCTATCTGCATAAACCGTCGCTTCCAACAATGTCACCTGATGTTCTTCTTCCTTCGGCAAGGCTGGTGTCGATCGATCACTCTCACAATGCCGAAATGGGTGTCTTCCTCGTTTGTCATCTGCGGGCACCAGACAGGCAAAAGCTCATTGCCGAGCTCCAGAGTGCATGCTCGACTTCTCGGTGTCGCTGCTGGTGGACACGGAAGCTGCCTCCTTGGTGGACTTGCGAGCTCGCTGACGAGGCCTGCTCGAGCCAGTGGGGTCAGCCTTGCGCTTCCCGCTTCCGAGGAGGCCAAAGGCGACCGCTTCAAGGGCTCTTGCCGTGGGAGGCCTGACTCTGGTTCCTTGCCTCCGAGGATTCATTGCCTGCGAAGAAGCCTGAAGATCAGGCTGAGGGTTGGCAGGTCCTCCTCTTGTTGCCTCCGGGGCATCATGAGCGATCTCGGTGTTTGAACTGGAAGTAGTCTCCTTATTCTTGAGGATGCTACCATGGTTGTCTGATGAAGGGGCGTGCGCAATTGTGACAGTCTTATCATCCTGCGGTGTTTCTAGTTTAACCTGATTAGCCACCAAATCACTAGACTGAGCTACTCCTTTGGCAGGTTTTGTATCCTCAACGGCGGTCTTCGAATGAACAGAAGCCAGTGTATCTACCTTATGCCCAGATGGCTTCTCCTTTGGCCTTGCCACATTCATCTTCTCATTTGATCTGTCATTGGCATGAGAGTTTGATGCATCCTTTATCTGCTGACATGGCTTCTCCTTGCCAGAACAGCTCGCAAGTGATTTGGATTGAAAACTACCACCAACATCAATAGCAGTTGGTTTTGATGAAGTTGATGGCAGCTTGACTTTCTCTTTTTCTAAACCGGGGCCTTTTGAGAAAGAAAAGCTGCGTCGACTGGTCTGGTCATTGCTACAGCTAGTTAGTCTTCTGCGCTTCGTCACTGGGGATAAGTACTTGCGCTTTTCAATTTTAGTTTTCTGGGGAAAGAAGCTTGTCGCACCAATTGTGTCACCATTGCCATTAGAAGAATGGCCATTAACTGGAAAAACTGAGCATGATGTAGCAGCCATATTTCGAAAAGAGTCCACTTGGCTTTCATTGTCTGCATTCTTGGATGAAACCATTTCAGTGCCATTCTCATCAGCTGTAACTCCTGCGTAGCCTTCCTTGTAATCTGATGATCTGTCATCTGTGTCATGTTCGTCTGAGGAACTATCACTCACCATATTATGTGTATGACGCAAAGGGCCAAAACTAATATTTGCATCAGCAGGCAAGTTCCTCAGCTCCCTCACTTGCGAGGGCTCTTCCCCTTGGACCAAGCTAGTATCGATTATTGTAAACTTTGGAAGCTCGTGATAGCCATCGAAAGGAACATCTTGGTTCAGTTTCATGGCTGTGTCAAAGCCATTTTTCTCAGCATTAACACCATTGCCCATTCCATCAACCTCTATCTCAAGAAGAACAGGGTCTGCTACCACTTTCTTGAGGACATCACTAACAGAATCAAAATAATGAGTGCCTTTTGTAAGTTCACTTCTTGAAAACCTTTGAATACCAGGCACAATGAATACAAGGCAATTCTTCGTTGTGCTGACATCATTTGGCTTCTCTGAGTGCCACCCTCTTGCAAGCAAACGAGGCCAGACAGCTTCCCAAAAAAGATCATTTGATCTTGTCTTGCTTCTTCTGAAATCACCCGTTAAGAATTTGATTATATCTTCTGAAGCAAGAGAGGAACAATCTTTGCCTGCAGGCATGCCGGGCTGAACAGAAAGGACTTGGTTTGGTTTGGATGGGTCCAAAACAAAACCAGTCAAATCATCCTTCCCTTTACCGATCGCAACCGCCTCAACAAAAGCTTCTATTCCAACAACAGATTTCAGATGAAAAACAAAATCCATTAATGATGTTTGGCTGTCGTTGAAAGATTTGAACATCTCATCCAACAGATCATGAGCTTCTTTAGGGATTTTAGATTTAAGGCGAGATATAAGCTCCTGCCTTCGCCAACCTATAAAAATGCGTTCCCCAAGAATGCATCTCCTTATTTTTGCTTTTCTGCAGGCTGACCATCTTTTATATGCTTCTCCTTTGTAGAACTTTCCATAATAGTAGGAAAGCACATCCCCAACAGTCTTACTACCTACAAATCTGCTCAACACATGCAGATTTTTGCCAAAAATATAGAGGCCAAGGAGCAATAATTCTGCTTCCTGATCACTCCAAATGGAAGTGGATGAATTAGGCACTGGAATAAACTGTTCAATTTCTCCTTGATCTGCCATGGCCTTATCAGTGAAGTTTAGACCTTCTTGAGTGGAACATGGAGCCAATTTATCATCGTGTGCTTGATGACTGTCAGATACTATCTGATCAGGTAGCTCTGGATGCGGATCCTGAGATGTTGAACACTGTCCACTTGTGTTATTACTGGTTGGGCAAATTGAGGTCGTTTGGCTATCCCCATCTCTGCTATTTTCTATAGCCTTGGTTTCTGAAGAATGCTGCTTTTGTATTTCCTCTTCCTTCTTATTGAATTCACTTGGTAATGTCCACATAATTGGTATAGGGCAATCATAACCAAGTGCCATGCAACTATCAGTTGTGTTGCTCATGTACTGACGACGCTCATCCTCTGTGGCAAGATTAGGGATCTCTGCTTGGTACGCTTTTCCAGTGCATATACGTGGTGGTAAGTCGTCATCTGTAGCATCTGATTGGTGTCCATCACCGTCTTCTGGCTCAAGTGACTCCATCTTAGCCGCCTCCATGTCCATGTCCATGCACGCACGCGAAGCCGCCACCGCCGCCGACGCCGCCCTCCTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0213800.1 | 3 | 12961707 | T | A |
| Osa03LNT0213800.1 | 3 | 12961748 | T | A |
| Osa03LNT0213800.1 | 3 | 12962150 | A | G |
| Osa03LNT0213800.1 | 3 | 12963802 | T | C |
| Osa03LNT0213800.1 | 3 | 12964350 | G | A |
| Osa03LNT0213800.1 | 3 | 12965883 | T | C |
| Osa03LNT0213800.1 | 3 | 12963346 | C | T |
| Osa03LNT0213800.1 | 3 | 12965825 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0213800.1 | osa-miR5542 | Cleavage | 5.0 | 16.237 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR5804 | Cleavage | 4.5 | 18.286 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR444a-3p.2 | Translation | 4.5 | 18.124 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR529b | Cleavage | 4.5 | 24.187 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR169r-5p | Cleavage | 5.0 | 15.833 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR444d.2 | Translation | 4.5 | 18.124 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR444e | Translation | 4.5 | 18.124 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR444f | Translation | 4.5 | 18.124 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR812f | Cleavage | 5.0 | 15.685 | 1 | 24 |
| Osa03LNT0213800.1 | osa-miR1881 | Translation | 5.0 | 18.823 | 1 | 24 |
| Osa03LNT0213800.1 | osa-miR2055 | Cleavage | 4.5 | 15.525 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR2055 | Cleavage | 5.0 | 13.083 | 1 | 21 |
| Osa03LNT0213800.1 | osa-miR5156 | Translation | 3.5 | 16.835 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0213800.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213800.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213800.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213800.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213800.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213800.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)