© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0213900.1
GGAAAAAATCTCTTTGGTTTCGGGTAAATGACAATGCGCAGGTGCTGGTTCTGTTTACTGTAATGAACAAACAGGTTAATCTCTACTGTACATGAGATTTACAGGGTTATAGAATTCATTGCCCACCATGCTTCCAAACCGTTCCATTTCGTAAGACCTGCTTGAGGAGACGGAGAATACTTATCTTGGTTAGCACAGCTCATTTCTCTCATCCCCCCTGCTCAAGACAATTACCAATTACAAAATTGTTCTTGAGTGCTGGCACATCATCAGTGCCCCACAGTAACACCAATAAAAGGTATTATGCTGCTTCGAAGTTAGTATAAGTAAGCGTCAGTCAAAGATTCACCTAATCTATAGAACCATGGCAGGGGAATGCTTGATATGGAGCCCATATGTTCCCGATAAAACACATTTGCCTACCTACAGCAGAATGGTTGCCAGAGTTCAAACCATCACGCATGAAAATCCGGTTCTACCTCAGCTGGATCCGTTCACACAGTAATTGCGTACCAACTGCCAAGAAGATGCTCTAAACTGTACAATATGCTTCCAAAAGGAACAGGTTAATCGAAGATGCTCCAAACTGTACCCAAAAAAAAAAAAAAACACTGAATGCCTCCAAAACGTATAAGATTAATCCGAAGTGGTGATCCTATTTGTATGAAAAAGCGCTGGATGCCTCTAAATGTACATAAACCAGGCAAGCCGGTCCCAGTTCCTATGGAGCTCACGCAGACTTAGTAGACCCATCTCTTTTGCACCGTGTAAATATGCTGAGGTAACTGCAGCCAGGCATTCCAACAATAGCTATTCATGGGGTGCCATTTCATGCAATTCTGAACATATCAGGTGTTGATTAACTCCATAGAAAGCCGGACAAGTCTCAGTAGCTCATTGACATTGTTGAAGTTAAAATCTAAAACTGTTCTTACTGAAGCAAGACCATCGTCCACAGTTTTTCCCCTTTCCTGACTGCTAGCAGCAGAAGCAATAGCAACCTGTGATTTCCGAGTTGCATCGAATGCACAATTGACATCATTTGTATAGGCAAGTAACCTCAATAAGTGTGCTTGGTTACGAACGGCCAGTGGCAAATGGTTGCCAGCCACTTGGGGTGAGTTTCCACCCTTGGTTGAAAGGGCCTTTGACAATCCATGGCTATTTAAATTATCGATATCTGAGGCAGACGATGATGGAGATTCACCTGGAGCTATCTGTACAACCGACTGTAGTTCTTGTCGATCCTTGCTTGCACTAGGGTGTTTGTAATACGCTGCTTTGAGGTAAGCCACTTCTACACATTTATATGCTAAAGCGGCAGAAGCCATTTTATTGCATCGTTCATAGGCATGAGCACAAAAGCTGCAGAGTTTTGCAGTTTCAGAATACATCTTCATTGACTGAGCAACATCGCCTGATCTCGAATTGTCCAGATTAGGAGTTTCCCAAAGAGATGCAACATGCAGAAACTTCAAAGCCGCTTCAAAGTACAGGCCCATACTTTCAAGTTCAAGTCCTTTTTCCTTCAAATGATTAGCCTTGTGTTTTAGATCCCGAGCTTCCTTGAGTGCAAATGCAATCATATTACCATCCCTCCTAATTGGACTCGCAGAATCTCCATTTTCAACATTGGACCTTAATTGTGTGTGGTTTTTTGAAGCACCTGGTTTTACTCTAGTGGTGTGAACCTCTGATTTGCCTTCTTTCATATGAGAATGATTATCTTGACCAATAGACTTTTGCATATCTTGATTATCAATACTAGGACGTAATTTCTCTTTTCTGGATGACATCTCTATCTGCTTATTTCCCTCTGAAATCAAGTTACTGGATCCATTTCTACCTTGGCGTGAAGGAGCACTATTTTTACTTTTATGTCCAGTGGAATCAGCTGTAGCCCTCGGGTTAAAACAATCCTGCTGATCAGGTTGTAGTGTAGGGCCATGCATATCCAAGATCTTTTTATCACCAGGGTACAATTGATTATCTACTCTCCCCATACCGGAGTTATTTGTAGAACCACGCAGAATGGCTTCACCCACAGCTTGCTGCCCAGTATGTAGTAAACCAACTTCGTGGGTTGGATATTTCATTGGGGTATGCAAGATGCTTGAATCAGCATTCAATTCTCCATCTTTTCCAGTTTTCCTGGCCTTAGAAATCTTATCAGTGTTTGAATTTTTCAGTGGTGATGAAGATACTGATTCAACGGGAGAGCCCTTTGCTTCTCGAGAATTTTTGTTTCTCCGAGAGCTTGAGACCTTTGAAGAGCTTGAAGTTGCAACCGTAGAAGACTGAAGACAGGCAACATCCCTCCTAGTGGGTTCCGCCAAGTTCAAGACCTGTCTGGGAGGTTGATTATCCCATAGTTCTGATGGACCTTCTTTACAAGTAACAAATTTGTTGTCAGCAACTAGCTCATTATCTTGACGCCTTCCAGCAGAAGAAAATAATGCATTTGCATCCTGAACTTCTTCAGGCCTAGCTTCGGACTTCTTTATCTTTGATAATCTCTCGTTCAAATTCTCATTATCGCCCCCTTTGCTTGTGTGGTCCATTGAACTGAGCCGGTTATCCTCCCATTCCTTCACTGTCTTCTTTTTGCCAGACAAATCTAATGTTTCTATGCCTGCACGATGTTCTTTCATCTTCTCATGAAAGGCCACATCATCATCATTAATTCTCTTTGTTTTTTCCAAAATATCAAACCTTGAAGCTTTTTCCTTGCGTAAAGAAAACTCATCTTGTTCACATGAGTCCTTTGACATTTTTGCTTTTGCAGATAAAGCTTTGGTTTCATCACGAACTTTGTTGCCAGCTAAATCGTATTCATTTTTCCAATCTTTGTTAAAGTAATGTCGATCCTCTTTTTTTGTCTTCTTAGATGTTTTGTGCTCATCTCGATCAATTCCTCTCCTGTTTTTTGATTTTGAATGCTTCTTCGATTTTTCTGTAAGATCTCCTCCATCTGAGTGGCTACTGCGACTCTTGTGCTTAGACTTATGCCTTTCAGAAGCTGATTTGCTCTGTGGCACCAGATCATGTGTGCTTACAGGATCTCTGTCATTAGTATAATGTTCACTATCAACAACTTCTCTATTTTTTGCAGGGGCTTGTTGATTGCTCGTGAGAGTCATTTTTGCAGGGGCTTGTTGATCATGCTCGTAACAGTTTTCGTCTTTCAGAGCATTTTTCCTTTTCCTACTCTGTCCCAGTTGTCCACTTATATTGTAGGTGCTAGATGCTGCTACACTTGCATGCGCAGTGTGAGGGCCACCTGAAGAAACACCAGCGGCAGGGATTTGAGTGACATAAAGTGCATTTAGAGCATTTGTTGTTTCATCCTCACTAATGTCGCATTTGTTCATCCCAGGTAGCCAGTCAAGCATGCTGCATATCCACTTTTTTGGAAGCATGGAAGTGTTTGTCCCGTAGGGGAGGAGACGCCATTTATGACACATGTCACAGCATACCCAATTATCCTCTATCAAAACAGGTGCAGGAAGAGAAGCTGCATTTGCAGGTCCAGGTATAATCCCGCCATTTGACGGCATATGCAACTGCTGTTCCTCTGAACCTGGAAATGTGCCATGCTTTACACTGGAAGGGATCTCCTTTTTTGCTGGCCCAGTTATATGAAGTTCCTTCTCATTATCACTGTTCATCATCTTCTCTTTCCGTTGACCCTGAACACTTACACTCTCCAATGAAGCCCCTTCCTTGTTTCCTATAGATCTCTTAGGCAGATTTTCACTAAGGTCTTTATGAGATTTTTCTTTCGATTTATTTTCAAAATGATTAGACTTCAAATGAGAATCAGTTGCCCCATCATTAACTAGTACAGAAGAATGGGTAAAATTACCATCCTCTAAGAAACTAGATGGTGCTACAAAATTAGCTTTGTGTTCCTTCTGCATTCGTTTGACCTCCGTTCTAGAGTTATCTTCCACAGTTCTCTCACTGGCAAAGGTTTCTTTACCATGAATTGTCTTCAAATCATCTGATGACCCAGCACCCCAGTCCTTGTCCACATTGCCTTCAAAATCATCCATGGCAGGCTCAAATGTTCTCATAGGTTTTACTTTGCTTTCTTTCTTCCTATCATACGGAGAAAATTTGTGACTACTTATATTCATGTCTTCTGAAGTCCTGTCCACTTTACTCGCCTTAAGTTTTACTTTCCCCCGTGGTGCTAAACAACCATTTCCTGAACTGTCAAAACTACTGTTTTCTTCTATATGCTTTGTTACTTCTGTTTTGACTGCTTCGCTTTTAACTGTTCCCAGGTCATTGCAGCCCATCTGTTGTTTCGGTCGAGCATCTTTAGTTGATTCTTCTGTGAATTGACTTACACCTTTTAACTCTGTGGTTGGGGCGCCAGAAGAACAGGTTATATCATGTGTGTCTGATAAAATCACTCGGCTGCCAGGTATTTCTACATTAGCCTCCTTGCCCAATATTGCACTAGTATTATTTGCATCTTTTCTAGTCTTTGTATCTATGGACTTCTTTTTCTTGCCATCAGGCTTCATTTTCTTAGCCACATGGGCTTTGACATGCCCAGACGAAAGAGAAAGTTCTGAATGGCCATCAACTGCTCTAGGTACATTTTTTAAGTCCAGATTAGTTTCCCATTTGTTAACCAATGGGGTGACCTTATTCGTCAATTTCAGAATGTTTCCATGCAGAGGTGACAGCAAGAATCCTCCAGGAACTGAAAAGTACGTCATGATCTGCAGGATGGTCCGAGGAGATTCATATGGCACATTACTACACACTGGAGATTGACCCTCATGACCATCAGGACTTCCTTCCATGGATGAAGAAGAAGAAATATCAAGGCCCAGGCCACTGTAGATAGATGCATTCTTTCTTGCCAAAGTATTAGTGGAACCAACTTTGATCCGAACTTTGAGTGTCTTCTGGTCACTACCATTAAATGAGCTGTCCAAGGAATCAGAACAAGCAACAGAGTCCTTCTCACCGTTTGTGCTTGAGCATATTTCTCTTTTACATAAATCACCAGATGACGGTGCAGTGGAACCATTATTTCGGGAGATAGATTCATTTGCCACAGTTGAAGGGTATTGACCCATGCTCTCAGCAGATTGTTGATAAGGTGATCTTGAAGTGCCAACGTTTGCAACCTTGGGTGGGCTTCTGCTTTGAGGCAAAGGTGGAGGTGAGCGCTGGTATGTGGGCAAAAACGAACCATATCCACCGTATTTTGATCCTAGGTTATCTGCGGATACTCCTCCTTCAAAGTCTTTCTGAAAATGTCCAAGAACATGTTGAATCTTTTCATCGATGTAGGAGAAGGCGACTTCGGGATCGAGGCAGAGCGCGCCGCCGCCGCCGTCGTCGTCGGGGAAGGCCTCCCCCTCCTCCAGCTCGACGTCGCCGTGGCCCATCACACGGAACCCCTCCTCCTGCCGCCCCCGCACCGACAGCATCCGCCGCCGCCGCCGCCGCCACCCAGCTCCAAATCGCCCGCTCCCTCGCTAGGGTTTGAAGGGGATCACGCGATTCGGCGGCTCCCCGTCGACGCTGGCTGTGGCCGCCCCGCCCCCCTCCTCCGGCTTCGACCTCGCCGCAGATATTTTTTACCGCGGGGCCCCTCCGATTATCTCTATTTCTGTTTCTATCCCTCTCCCTCCTGTCTCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0213900.1 | 3 | 12991830 | C | T |
| Osa03LNT0213900.1 | 3 | 12989653 | A | C |
| Osa03LNT0213900.1 | 3 | 12990072 | C | T |
| Osa03LNT0213900.1 | 3 | 12991037 | G | A |
| Osa03LNT0213900.1 | 3 | 12991983 | A | G |
| Osa03LNT0213900.1 | 3 | 12992941 | T | G |
| Osa03LNT0213900.1 | 3 | 12995829 | T | C |
| Osa03LNT0213900.1 | 3 | 12996481 | C | T |
| Osa03LNT0213900.1 | 3 | 12997137 | A | G |
| Osa03LNT0213900.1 | 3 | 12998438 | C | T |
| Osa03LNT0213900.1 | 3 | 12998805 | G | T |
| Osa03LNT0213900.1 | 3 | 12999693 | A | G |
| Osa03LNT0213900.1 | 3 | 12999776 | A | G |
| Osa03LNT0213900.1 | 3 | 13000225 | G | C |
| Osa03LNT0213900.1 | 3 | 13001211 | A | C |
| Osa03LNT0213900.1 | 3 | 12992720 | G | C |
| Osa03LNT0213900.1 | 3 | 12992827 | C | T |
| Osa03LNT0213900.1 | 3 | 12993416 | G | A |
| Osa03LNT0213900.1 | 3 | 12994353 | T | C |
| Osa03LNT0213900.1 | 3 | 12995110 | G | A |
| Osa03LNT0213900.1 | 3 | 12995232 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0213900.1 | osa-miR5528 | Cleavage | 4.0 | 13.212 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5536 | Cleavage | 4.5 | 14.498 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR5825 | Cleavage | 4.5 | 12.092 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR5835 | Translation | 2.5 | 11.355 | 1 | 23 |
| Osa03LNT0213900.1 | osa-miR6255 | Cleavage | 3.5 | 17.67 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR7693-3p | Translation | 4.5 | 13.575 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR395f | Cleavage | 5.0 | 10.128 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR396a-3p | Translation | 4.5 | 19.459 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR396b-3p | Translation | 4.5 | 19.459 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR156k | Translation | 4.5 | 11.762 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR159a.1 | Translation | 3.5 | 13.356 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR159b | Translation | 3.5 | 13.356 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR159d | Translation | 4.5 | 13.356 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR159f | Translation | 4.5 | 13.356 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR162b | Cleavage | 4.5 | 21.57 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR162b | Cleavage | 4.5 | 20.405 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR168b | Translation | 4.5 | 14.054 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR169f.2 | Translation | 4.0 | 18.009 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR171c-5p | Cleavage | 5.0 | 15.611 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR171c-5p | Cleavage | 5.0 | 21.146 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR437 | Cleavage | 4.0 | 15.519 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR444a-3p.2 | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR529b | Cleavage | 4.0 | 11.223 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR529b | Cleavage | 4.5 | 11.542 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR444d.2 | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR444e | Translation | 4.5 | 14.06 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR1438 | Cleavage | 4.5 | 12.063 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR1853-3p | Cleavage | 4.5 | 17.918 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR1862a | Cleavage | 4.0 | 18.564 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR1862b | Cleavage | 4.0 | 18.564 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR1862c | Cleavage | 4.0 | 18.564 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR1319a | Cleavage | 5.0 | 22.806 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR2097-5p | Translation | 3.5 | 1.315 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR2864.1 | Translation | 3.5 | 16.382 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR2873a | Translation | 4.0 | 15.179 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR2919 | Cleavage | 3.5 | 1.315 | 1 | 19 |
| Osa03LNT0213900.1 | osa-miR2921 | Translation | 4.5 | 7.308 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR2923 | Cleavage | 5.0 | 10.492 | 1 | 22 |
| Osa03LNT0213900.1 | osa-miR2926 | Cleavage | 4.5 | 21.975 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR1862f | Cleavage | 4.5 | 18.564 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR1862f | Translation | 5.0 | 11.637 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR1862g | Cleavage | 4.5 | 18.564 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR1862g | Translation | 5.0 | 11.637 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR5073 | Cleavage | 4.5 | 16.781 | 1 | 23 |
| Osa03LNT0213900.1 | osa-miR5155 | Cleavage | 5.0 | 14.518 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR5155 | Translation | 5.0 | 10.773 | 1 | 24 |
| Osa03LNT0213900.1 | osa-miR5340 | Translation | 5.0 | 11.019 | 1 | 23 |
| Osa03LNT0213900.1 | osa-miR5484 | Cleavage | 5.0 | 19.824 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5497 | Cleavage | 4.5 | 19.475 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5499 | Cleavage | 4.5 | 13.115 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5499 | Cleavage | 5.0 | 11.356 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5499 | Translation | 5.0 | 11.604 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5501 | Cleavage | 5.0 | 21.846 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR5515 | Translation | 4.5 | 24.734 | 1 | 21 |
| Osa03LNT0213900.1 | osa-miR172d-5p | Cleavage | 4.5 | 14.675 | 1 | 20 |
| Osa03LNT0213900.1 | osa-miR5497 | Cleavage | 5.0 | 13.237 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0213900.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213900.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213900.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213900.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213900.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213900.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)