© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0214700.1
GGAGGGCAATTTCATAGTTCAGGACTGCTCTTGTCTTCAGGAACTAGGAATCTAGGTGTTTTTTTTAACTCTGCTTCCAACAACACTAATCAGAAAGATCAGCCATGCAAGTAGGCAAACCGATCACTCAGTCGCTGTCCTCCGTCTTGGACTTCTTCTTTTTCTTCTTCCCTTCAGTGGCCGTCTTAGGCTCAGCGTCCTCCGAGACTTCACGGTTCTTCTTCTTCTTCTTCTTGGGAGTACCGTTCTCCTCGGCGTCGCCATTGGCATGCGCCACGCTCTTCTCCTGCTCCTGTGGCTCCTCCTCCAGCTTGTGCTTCTTCTTCTTTTTCTTCTTCTCAGTTCCAGGCTCAGCTTCATCAGCCACATTGGAAGGCTTGTCCAGGTCCATTGCTTCGCCGTCAGCTTCAGCTTTAGACTTCTTTTTCTTACTTTTCTTGGCAGATGCATCGACCTTCTCGCCATCTGCACAATGCACAGTTTATAAATGATAGTAACATGTAGCTCAATGTTAGCATTTCTGGCAACCGAAGTTAGCCAACTTACCATCAACATCATTTGTGGCATCATTAACCATGCTGTCTATCGCAGCTTTCATCACATCAAGGTTTTTACGAGGTGCAACACCCTTGTCATAGAAGTCTAACCGCTCCTCAACTTGCTCACGAAGCTTTTGCCCAAAGACTGCGGTAGCTGACTCTGAATAACAATCAATGCGTGATGCAATGGAGCACTTGTTCGCCAGATATCTAGCCATTCTGCCTTTGTTCTTGGTTGAAGCACGGCCAATGAAGGATGAGTGGAATATAAGGCCATACTTTGGCGTATTCCCCCTAGTTTTCAATGCCCTGAAAAGTGCCTTTTCAGCACCAAGTATCTGGAGAGTGGAGGCAGGACACTTAGCAAGGTTTGAAAGACTGCCAGCATGAGAGATAAGGCGTGCTCCAACAACTTCACCAATTAATGATGTTAGATTCGGTGCAATATCATTCATCTTGGTAACAAGATACTCATAAAGGTTTTTACGATATTCAGACAGATTCATGACTCTTTGAGCAAACTGCTTCACATTCATCAAATCAACTTCTGACAGATCCTGACCCATTGAAGCCTTTGCTGCTTCGACAACTTCTTTTGCCTTATCTTCATCTCCAATCAGATCAGCTAACTTCGAAATATCTTTTTCCGCCAACTCAGATTTGTCCTTTATATAATCAGCAAGCTTAGCATAGATGTAGTTGTCATTGACAATTTTGACCAACTCAGGAAAATGCCATCCAAACCATTCCCTCACTCTCATGGAGAAAGAATTGATGTCCTTGTCAAGTGTATCCAACAGGAAGATAGCCTGAATCACCATGTTGTCAACGCGGTTCACATTGAACTTCACCTTCGCCCTGCTGTAGCTATGACCCAGGCCAAGCTGCGCCTTCTCCAAGTCCGATTTCTTGAGCTCGCTGATGAAGCGGTCGAAGTGGAGGCGGACGCCGCGGAGAAGCTCCTGGACGAACTCGTTGCTCTGGCACGGGATGCCGGTGACCTCGGAGATGTGGGAGCCGACCTTGGGCTCGACGACGCCGAGGCTGTACTTGGCCTTCTTCCCCTCCTTGGGCTTGGGCAGGTTCAGCTCCAGGAAGCTCCTCAGCTCGTCGGTCATGATCCCTTCGGAGATGGCGTTGCACTGGTTGAGGGCGTCCACGGCGGAGGAGAAGGGGGTGAAGGCGGCGAGCTTGACGGCCTTGCCGAAGCGGTCGAGGTCGACGACGGAGGCGCGGACGGCGTCCACGCTCTGCCCGATCTCGTCGATGCCGTAGGCGTGGAAGAGGCCGTAGCCGGACGCCGACTCGAAGAGCAGGTACAGCGCCATCTCGCCGGCGGCGTCGGCGGCGGCGGCGGGTTGAGGTTTGGGGGCGGCGGCGGAAGGGGGGTTAGGGTTTTAGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0214700.1 | 3 | 13222793 | G | C |
| Osa03LNT0214700.1 | 3 | 13223048 | A | G |
| Osa03LNT0214700.1 | 3 | 13223797 | A | G |
| Osa03LNT0214700.1 | 3 | 13224089 | C | T |
| Osa03LNT0214700.1 | 3 | 13224102 | C | T |
| Osa03LNT0214700.1 | 3 | 13224901 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0214700.1 | osa-miR169f.2 | Cleavage | 4.5 | 17.649 | 1 | 21 |
| Osa03LNT0214700.1 | osa-miR1426 | Cleavage | 4.0 | 17.782 | 1 | 21 |
| Osa03LNT0214700.1 | osa-miR1846a-3p | Cleavage | 4.5 | 20.734 | 1 | 21 |
| Osa03LNT0214700.1 | osa-miR1846a-3p | Translation | 5.0 | 18.388 | 1 | 21 |
| Osa03LNT0214700.1 | osa-miR1846b-3p | Cleavage | 4.5 | 20.734 | 1 | 21 |
| Osa03LNT0214700.1 | osa-miR1846b-3p | Translation | 5.0 | 18.388 | 1 | 21 |
| Osa03LNT0214700.1 | osa-miR1861d | Translation | 5.0 | 15.55 | 1 | 22 |
| Osa03LNT0214700.1 | osa-miR1861g | Translation | 3.5 | 15.55 | 1 | 22 |
| Osa03LNT0214700.1 | osa-miR1882e-3p | Translation | 4.5 | 13.563 | 1 | 24 |
| Osa03LNT0214700.1 | osa-miR5149 | Cleavage | 4.5 | 15.927 | 1 | 22 |
| Osa03LNT0214700.1 | osa-miR5521 | Translation | 3.5 | 16.372 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0214700.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0214700.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0214700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0214700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0214700.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214700.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214700.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214700.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)