© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0019300.1
GCGTGAATAATGTTTATTACGGAGTAATCACTATTTCCATCAGCTGACAACTTTCGATACTGAATTACTGATACTCGTTCAGTCTCCTGCATACACATTACAGATAAGTACTGTAGTATTTTTGCATCTATGTCATTTCTCAATTACTCCTAGTGCCCTCCATTGCTGAGCGGTGGAACCTTTTTTTTTTTTTTAGAGAACTCTGAGCGGCCAATCTATCCATCGTTGTCCTCTGCGCCAGATTTGGGTGCCACTCGACTTTTGGGTGGTGGATCTATCACGAACAGTAGTAACCTTCTGATTTGCCTTCCTTGAACCTCTGCCAGCTTCAACTTAATTATTTGTTTCTTTCCAAACCAGCCTCCCTATAGATCAGTAGCTCATAGCAGGTAGCACCGTGGTAGAGCAGATTCTTGACTGGAATTCATTCAACATGGCAAGGGAATACGCGATGCAGTGAGATCCAAACAACGAACAGTCTGAGGTTCACTTCAATCTGATTCTTGTCTGTGTTTTCCCACTGTTGTAGTTCATTGTTAGGAAAACCACATCGGAGGCCTATCAGCTGGTGCAGAACTCAAGTACATGATACTGATTTGAACAAAGTTTTGAAGTTTGAATTGGACCAGTTGAAACCTTTAACTCCAAATGGCTATAAGATTGAACCATTCAACGAGTTACCTTACTTTGGTTGATCTTTTCGCTATCTGTTAACATTCACTTCATAGTTTCATGTGCTACTTTTGACCTCATTATTCTCTAGCAATTCACCACGTCACACAGAGAGACCTGGCCGTGGTCCTCTCCACCAAGATTTCTCCATACTGTGCGGCATGCTAGCATTAGCAAGTCATGCACCCCCAATGGCCCTTCCAGTGAGATTTAGTGTACGGGTTGAATTTTCAGAAATCAGTTCAAACCATGGAACCAGTATGCCTCAGCACCCTTTTTCTTCCCAAAACCGGTAAGCAGGAGCTTTATTCATGAAATAGCACTACAGTCATCTCAGAGCGAACTCATGCTTCAAGGCACGTCAATGCTCATCCGGCACTGGGCCACAAACAACTGACAGATTAGCTTCCCTCTGAAACAAACCGAAACAAAAACCCAGCACATCCTCTCAGGTACAGGCAGCCCGCATGCTTGACAGTTAGCAATAAGAGTAGATGGGGTGGGAATAGATTGTTCTTGAGGCACCCATGAATAGATATGCATGGACGTAGTCTCTTGAAAAGAATAATGCAGTGTGCATTGGCCAATCAGACTGCCCCCTTCTGTAGTATCTATAGAGCAGGCTGGCATAGTGTTATTTGCTAAAATGTTTCAGTGGCACCATACTAATTATGTGTCATATATTCCTCACTTGTGAAAGCTGACAAAAGCTGACAATATGCTGACTGGACACGATATAACTAGGAACTGGTAAAACAGAAATTTTCCTTGGTATGACACCTACTGCCTAGTGTCTGGCCCAAGGTACCAGGTCAATTTTCCACTTGCAGATTTTTGTCTATAACTGCCACTGAATTGCTATTTACATTATGGTCCTGCTTCACCAAAATATAGCCTACAAAGCCACCTATTTTCACTGAGGAAAATTGAACTCCGAAGTAAAGCATCACGATCTGCAGTAAGACCTTCCCATTTTTCAGGTGCAATTTTGTGGGACATCATCCAATGTCTCGCTGTAATTTTGTGATGCAGCTCTGCAGCGTGACCATTGGAAGTCATTATGCTGGTATCATCTTGGTTTCAACACATGACTCATATGGATTTCAAGTTTCCAACCACTATGGAAATAGTAGTGGTAACCACATAGCGAAGTTGTGTTCAAGTTGCTCAACAAGTTCCTTAGGTGTTACAAGGCATATGGTTAGCCTTCCCATTCAGCTAATCAAAAAGTCGCCATCATTCTTCATTCTTTGGTAGTTTGGGCACATATGAAGAACTTGTCAAACATGTAGAGATGGCTGCCGAATTAAGCTGTCTTTATAAGTTTTGCTGATTCTTGGGCTTTTCATATCCTTTACAAAGTCAGCTATAAGCTGCAGATATCCATTCCAGTTGATCTTCTTCATGAGATTCTGCCAATGGACCCAGCTCTTCATCAAACGATAACTTAGATGATGAGTGGTAACCTTCATCCTTCATGTGTTTAGCTAGCCTTCTCAGCTGTGCATTTATATTTTCTGCTTCAGGATGCTGCTGTTCGCCAACTACAAACACATGAACTCGGCTGTTAAGCTCAACCCAGCTACATCCAGGATCTTTGTTAACTCCTCGAAGTCTCATCAAATGCCTCACCCTTTCAACATCATTCCATTTTCTCTGGGAAGCATAGATGTTTGACAGCAATATATATGCTGAGGAATCTCCGGTACCTAACTCCATCAACCGTTCACCAGCATATGCTCCGACATCAAAATCTCGCAAAGAGCGACATGCTCCTAGTACTATACGCCACAAACATGTTCCGTGGTCAATAGTAATGGACTCTATGAAATCCTTTGCTTCCTTAAGCATCCCTGCTCGGCTAAGAATATCAACCATGCAAGCATAGTGATCCAGCCTAGGAGTTAAACCATAATCTTTTGTCATTAAACTAAAATATTCCCATCCTCTGTCAACTAGACCCATATGACTGCAAGCACACAATATATTAATGAATGTTATATTATCAGGTATAGTGCCCTCCATCTTCATTTCTTCAAAAAGATCCAGTGCACCATTGCCACACCCATTTTGTGAAAAACCAGAAATGATTGAGTTCCATGCAATAACATCCCTATCAGGAATCCTTCTGAAGACAGACATGCCATCTTCAAGGTTCCCACACTTTGAATACATCGTAGACAAGGCACTTCCAACAGGGGCCCCCAAACCTAACCCATATTTCACGATTTGCGTGTGCAATTGTTTCCCTGGTTCCAGTGCTGCAATGCCAGCACATGCTCTCAGACCACTAGCTATAGTCGATTTACTGGGGATGATACCTTCCTTGTCCATCCTGGCATACAATGTCAGGGCTTCCTCGTGCTCCCCATTCTGCACATGCCCAGAAACCATCGCTGTCCAAAGGACAATGTCAACCTCGTACAACTGATCAAACCCTTCTTTTGCGTCAGCAATACAACCACATTTTGCATACATGTCCACCAGTGCACTCTTCACATATATCTGAACCTCAAACCCAAGCTTCACCATCAAACCGTGGGCTTGCTTCCCTACTGCCAATGCTCCCAAATCACTACTTGCATTGAGAACCCCAACAAAAGTGAACTCTGTTGGTGTGAACCCAGCAGCATGCATCTGTGAGAACATACTAACTGCACTGTCTGCCTCACCATTTTGTGCATACCCAGTAATCATCGCCGACCAAGTGATCGAATTCCTCTCCCTCGATGACTCAAACACATGAAACGCAGCACCCATACACCCAGCCTTCGCATACATCGTGACAAGCGAGTTTTCCACAGATACAAAATCCAGCAACCCATCCTTCACAATCAGTCCATGCATCTGCTCCCCCATCAGCAAACCCAATGGCACACTAACTGCGCTGAGAACTGCTGTGGCAACAAACTCGCTTTTCTCAGAAGGGCACTCTTCGAGCATTAGTCGGAAGAGATCGAATGCCTCCTCGGAGCATTTCTCTGCAGCATAACCTGCCACCATGGTGGACCAGGAAAATGAGTTGCGCTGAGGCATTCCGTCGAACACTCTGCGAGCATCAGAAACAATGCCCAGCTTACAGTACATGTTGAGCAGGCTGGTGCACACGTACACATTGGATACGGCAGAGGGGATCTTGCAAGCGAGAGCGTGGGCCGCGGTGCCGGCGGGCGCGGAGGCCGCACGGGCGGCGGCGGTGAAGGCGGCAGCGAAGGAATGGGGCGACGGAAGGACGGTGGAGGAGGAGAGCATGGAGCGGAAGCGGGAGAGCGCGTCGAGCGGGCGGTGGCCGGAGAGCGGGTTGAGGAGGGAGTTCCAGGAGGTGACGTCGCGGGCGGCGGGAGGGATATCGTCGAACACCGCGAAGGCGGCGGCGAGGAGGGGCCGGGGGAGCGAGGAGTAGAAGTTGATGAGGGAGTTGGCGACGGGCGCGTGGGAGGCGGCGCCGGACTTGAGCGCCCAGGCGTGGAGGGCCTCGCCGTGGCGAGGGCAGGAGGCGCGCCGGCGGAGGAGCTCGATGAACTGCGTGTGCGACATTCGCCGCGCCGACGAGGGCGCCGCGGCTGCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0019300.1 | 1 | 15415581 | A | G |
| Osa01LNT0019300.1 | 1 | 15415615 | A | C |
| Osa01LNT0019300.1 | 1 | 15416071 | A | G |
| Osa01LNT0019300.1 | 1 | 15417340 | G | A |
| Osa01LNT0019300.1 | 1 | 15417597 | A | C |
| Osa01LNT0019300.1 | 1 | 15418583 | C | T |
| Osa01LNT0019300.1 | 1 | 15420575 | A | G |
| Osa01LNT0019300.1 | 1 | 15420609 | G | A |
| Osa01LNT0019300.1 | 1 | 15420246 | T | C |
| Osa01LNT0019300.1 | 1 | 15414942 | T | G |
| Osa01LNT0019300.1 | 1 | 15414960 | G | C |
| Osa01LNT0019300.1 | 1 | 15415037 | G | C |
| Osa01LNT0019300.1 | 1 | 15418093 | C | T |
| Osa01LNT0019300.1 | 1 | 15418318 | G | A |
| Osa01LNT0019300.1 | 1 | 15418345 | T | C |
| Osa01LNT0019300.1 | 1 | 15418347 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0019300.1 | osa-miR1861o | Cleavage | 4.5 | 14.303 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR159c | Cleavage | 4.0 | 19.366 | 1 | 21 |
| Osa01LNT0019300.1 | osa-miR159d | Cleavage | 4.0 | 19.366 | 1 | 21 |
| Osa01LNT0019300.1 | osa-miR159e | Cleavage | 4.0 | 19.366 | 1 | 21 |
| Osa01LNT0019300.1 | osa-miR159f | Cleavage | 5.0 | 19.366 | 1 | 21 |
| Osa01LNT0019300.1 | osa-miR171f-5p | Cleavage | 5.0 | 17.614 | 1 | 21 |
| Osa01LNT0019300.1 | osa-miR1432-3p | Cleavage | 4.5 | 16.208 | 1 | 21 |
| Osa01LNT0019300.1 | osa-miR1850.3 | Cleavage | 4.5 | 18.431 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR1861a | Cleavage | 4.5 | 14.303 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR1861b | Cleavage | 5.0 | 14.303 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR1861f | Cleavage | 5.0 | 14.303 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR1861i | Cleavage | 5.0 | 14.303 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR1861l | Cleavage | 5.0 | 14.303 | 1 | 22 |
| Osa01LNT0019300.1 | osa-miR1876 | Translation | 3.0 | 11.712 | 1 | 24 |
| Osa01LNT0019300.1 | osa-miR812g | Cleavage | 5.0 | 7.115 | 1 | 24 |
| Osa01LNT0019300.1 | osa-miR812h | Cleavage | 5.0 | 7.115 | 1 | 24 |
| Osa01LNT0019300.1 | osa-miR812i | Cleavage | 5.0 | 7.115 | 1 | 24 |
| Osa01LNT0019300.1 | osa-miR812j | Cleavage | 5.0 | 7.115 | 1 | 24 |
| Osa01LNT0019300.1 | osa-miR528-3p | Translation | 4.0 | 11.813 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0019300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0019300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0019300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0019300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0019300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0019300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0019300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)