© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0215300.1
GTGATATTTACACAACAAAAGAACTGCGGCAAAATGATTTGTATTTATTTGTTTATGTACGATGAGACCAAACAGTTTCAGTAAATCATTTGGGGTAGTTGTTGTCAGAGGGGTAGGAGGGTTTCATGAATGGACATGAACAATGAGATTCTCCGAAGAGAAATACAACATTGTTAGGCTAACAATACAACCTATGGCTAAAGATTGATGCATTGACAGCCTCTATTCCTACAATACATTGATCTGCCTTCCGCTTCTGCAATCCTACTATGCTAAGATACATATTTACAAGGAGGAAGGCAGGTACTTATCTCCCTCCTTTTTGGTGGGTCTTCATGTGAAGGAACCAAACCGATGAATCAGAAAGCATCAACGAAAGCATCTCGAAGTGCCCAGCTGACAAAAGCATCGACCCATTCACGGATAGCAAAAATGTTATCTTGGTCTCCAGCTACCATGTGCTCCTACATGTGGAACTGGAGGCTCCATAGAATGTCTGGAGGGAGAATAATTCGATGACCGAGGAGGCATAGACCACCCAGAGCAAGGACCTGGTGGAGGATCTGATGGTCGTCCGTAGTGCACTGGTGCTGCTGACGATGCTTCAAAATGGTCTGGACCAGGAGGCCCTGGAGGAAAAGGAAATCTGCCCCTGTCAGCAACTTCGTGGTGCATTGGTCCCCTAATAGCTCTCTCATCAAAGGAACGTCCTCTGTCATCAAAATGGTGTCCTCTATCATCAAAATAATGTCCTCTATCATCATAGTGATATCCTCTATCATCATAGTGGTATCCTCTATCATCAAAGTGATGTCGTCTATCATGCCCATGATGTCTTCTATCATGCCTGTGATGATCTCGATCATGTCCATCATACCGATATCTCTCAGGATAGGATGAACTATTATTACTCCAAGGCCGTGGTCTTTGCTGAGGTTCTGGTGGTCGATAGGGGCATTGGTTTATAGGAGGTGGAGGGGGTGGTGGTTGCATATGATATCCTTCGTTAGGTACCGATGCCATTGGGGGTTGATGATAGTTATTCCCATGATATGGTGCAGGAGGTGCAGGAAAATTGCCATGGGGTCCAGGCGGATTAAGTGGTGCAATTGGGGGCGGCGGTGGCATCTGATTTGGATGCCCCCCATATCCTGAATTACAGAATGGTGGAGGCTGCAATTGCGCTACAGAAGGATTCATACTGCCTGGGCGTTCCACAACAGAATTTGGCTGTTGCGTCTGAATATTATTGGTAGCTCTTGTAGGATGCGGACCAACTGGATCAGATGCCATTGGTAATGTTCGCTGCAACTGTCCAGTCTGAGTAATTGGAGCAGGTGGTGGTGGCGGAACAGGTGGAGGAGATGATGGCAATGGCGGGGGCGATGGAGGCCTATCATCAGGGAGGGGAGGACCTAAAGTATGTCGATCAGATGTTCTGCATTTGGTATCAATTTGTTCTGGCCGACATCTGGTGCTAGCTTCAACTTCAGATGGTGGAGCTACATCCTCCATCTCAAGCTCGCCATCAACTTCTTCAAGGATGCGATGATGCTTTTCTGCGGGCATTTGTGATTCTTCCTTCTCATCAGTGCAAGGAGCATCATGTTCAGGTGTAACAGCTTCAAAACTTCTATCTTCAGAGGAGCTTCCGTCCTCATCTTCAAGTACTTTTGTGGAAATTAAGTTTGGTAGTTGAAAACCAGCATTGCTGCCATACTCATCAACAAGCATTCCTTCGTTGTCACGCAACGGGTCATTTAAAGCTCTTTCTGTCCTTGAAGGACGGCGAGAACTTCCAAAAGATGCCTCATTGATAACCTCAAGTTCTCTAATATGGTGGCGAATGATGTACTCTGGGAGTGTTTTCCTCTCAAACCAAAGCTTCAAAACCTTTAGACATTGCCTTCGATTCTCCCATGCCGAATTTCCAGGAGGTGCAGCAGCATAAAGTAATCGAGGTAGAACTGCCTGGATAAGAGACGGGTAAACATCTCCAGCTCCACCTTTCTGGTTACGAGAGTATTGAGTTATTGAATCCACAAGAAAGAAAAGGTCCACTCTCTTATATAAATTCGACTCCTTCTCCAAGCGTTCAACGATAATATCAATCGCCTCTCCAGCAACGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCTTTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCATGTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATTATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCCTTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAAAAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGAATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAGAAGGTGTGCACTTCAAATGTCCGGGTGTCTGCATCAGATTGTATACTGGAAGATTTAGTGGCCAGCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCAGCTACAACAGTTTCATTATGCAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACTTTGGTCGGTAAATTGGCTCATCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTCAACTGGTTTTGGGCCTTCATTGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCCAAAGATGAAGATAAACGATCAGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCAGCTTCATTGAAAGAGCCAAGCCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAAGCAATCAGTAGTTTTGCTATCAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTGTCATCTTTTGCTTCTGAAGGAACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATTCTGAGGAGTGTGTTTTGCACTTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCTTTCTGCTATTGCAGATCCGTTAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTGTTTTCTGAAGCCACAAAACCATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTATTAGTTTCAGCAACATTAGCGGACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAAAGCAGCTTCAACATCCAATGTTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGACCTTCACCTGAGGGGCCAGGCATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTCTTCCTGTCAAGGAAACACTATTTACCACTGCTGACTGATCGACTGAACAATCATCACCAGGTAGTGCAACTGTGTTATGCATATTACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTAACATCAATCCCATCAACTGGTGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTTTGACCAATGGCAAGTGCTCATCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATCTGCCGTTTTTTCACTTAACTCAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATATTTCTACTTGGCTTTCTCTTTCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCATCATGCGATTTAAATTGTGTCTCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATCTACCTTAGTGGTATAATTCAGCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTGTCGATGCCCGCACTTGAATGCAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTTTTACATCCTCAACATACACATGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAACTGAAGCCAAACAGGTTCCACCTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTCAGTGAACTTCTTGACCTCCGCAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTGCATCCCTTAGCTTCTTTGAAATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGATAGACACATTTTCAGTAGGGTCATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCGGTAACAGAAGGCTCATCAGAATCGGCCGTATTATGACCACTTGCAACTATGGAATGGTCTTCTTGCTTTTTATCACTACCCATATTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATTATTAGCAAGTTTTTCTACACCTGGTTTCACTTCATTGGCAACCAAACCGAGCTTATTATTACCTTCCTTCAAAGAATCATAAACATCGATTATCTCATCAACTGCCCTCAAAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGAGACCTCCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCAATCTGTTTAGTTCCATAGAAGTACACCAGTATCTTCTTTTTAACAGACGTCTGGCCCCACTGCTCTGGCTCACTTATCATGGCCGGCCACGCCGGGAAGCCCTTCATCTTAGCGAGCACGAGGTCCCCCACCTTCCACTGCGCCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCCGCGCGCTTCTTCCTCGCCGGCGCCATATCCGCCACCACCCAACCGTCTCCACCACACCCCCCGCCGCCCAAACCACCGGCGATCAGCAACCCACGGGGGGAGGAGGAGGCGCGCCCCCACCACCAACGACGACGGCTAAGCTACCGCCCTACGCCGCCCCGCGAGGCGGCCGCGCCACAAGAGGCAGCGGCGGGGGCACCCGGCTGCCGTCCTCCTCCTCCTCCTCCTCTCCTCGGGCTCCGCGGCGGCGATGGCGGCGGCGGCATGGGAGGGGGAGGGCTGTGGCTTCGACTTGGGGATTTTTTTTTCCACTTTTGTTTTTCTTTTTTTCCTCCGAGTTTTATTCGTGGGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0215300.1 | 3 | 13845862 | T | C |
| Osa03LNT0215300.1 | 3 | 13841204 | C | T |
| Osa03LNT0215300.1 | 3 | 13841694 | A | G |
| Osa03LNT0215300.1 | 3 | 13841745 | C | T |
| Osa03LNT0215300.1 | 3 | 13842494 | A | T |
| Osa03LNT0215300.1 | 3 | 13842554 | T | C |
| Osa03LNT0215300.1 | 3 | 13843457 | T | C |
| Osa03LNT0215300.1 | 3 | 13844145 | T | C |
| Osa03LNT0215300.1 | 3 | 13844554 | A | T |
| Osa03LNT0215300.1 | 3 | 13845609 | A | C |
| Osa03LNT0215300.1 | 3 | 13845820 | G | A |
| Osa03LNT0215300.1 | 3 | 13846555 | A | C |
| Osa03LNT0215300.1 | 3 | 13848562 | C | G |
| Osa03LNT0215300.1 | 3 | 13850137 | C | G |
| Osa03LNT0215300.1 | 3 | 13850947 | C | T |
| Osa03LNT0215300.1 | 3 | 13850995 | A | G |
| Osa03LNT0215300.1 | 3 | 13851019 | C | T |
| Osa03LNT0215300.1 | 3 | 13851058 | A | G |
| Osa03LNT0215300.1 | 3 | 13852007 | C | G |
| Osa03LNT0215300.1 | 3 | 13852025 | T | C |
| Osa03LNT0215300.1 | 3 | 13852321 | G | A |
| Osa03LNT0215300.1 | 3 | 13852485 | T | C |
| Osa03LNT0215300.1 | 3 | 13852491 | A | T |
| Osa03LNT0215300.1 | 3 | 13852541 | A | G |
| Osa03LNT0215300.1 | 3 | 13853856 | A | G |
| Osa03LNT0215300.1 | 3 | 13854222 | A | G |
| Osa03LNT0215300.1 | 3 | 13854261 | T | C |
| Osa03LNT0215300.1 | 3 | 13854312 | T | C |
| Osa03LNT0215300.1 | 3 | 13854656 | A | G |
| Osa03LNT0215300.1 | 3 | 13854804 | A | G |
| Osa03LNT0215300.1 | 3 | 13854848 | A | T |
| Osa03LNT0215300.1 | 3 | 13854964 | T | C |
| Osa03LNT0215300.1 | 3 | 13854979 | A | G |
| Osa03LNT0215300.1 | 3 | 13855016 | T | C |
| Osa03LNT0215300.1 | 3 | 13855051 | A | G |
| Osa03LNT0215300.1 | 3 | 13855681 | T | G |
| Osa03LNT0215300.1 | 3 | 13856171 | T | C |
| Osa03LNT0215300.1 | 3 | 13856366 | T | C |
| Osa03LNT0215300.1 | 3 | 13856707 | A | G |
| Osa03LNT0215300.1 | 3 | 13856964 | G | A |
| Osa03LNT0215300.1 | 3 | 13857513 | A | C |
| Osa03LNT0215300.1 | 3 | 13859105 | T | C |
| Osa03LNT0215300.1 | 3 | 13859553 | T | G |
| Osa03LNT0215300.1 | 3 | 13859736 | C | T |
| Osa03LNT0215300.1 | 3 | 13859770 | A | G |
| Osa03LNT0215300.1 | 3 | 13860677 | T | C |
| Osa03LNT0215300.1 | 3 | 13853349 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0215300.1 | osa-miR5526 | Cleavage | 5.0 | 13.579 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR5813 | Cleavage | 4.5 | 22.469 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR5826 | Cleavage | 3.5 | 20.627 | 1 | 24 |
| Osa03LNT0215300.1 | osa-miR6248 | Translation | 4.0 | 23.878 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR6248 | Cleavage | 4.5 | 13.937 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR5512b | Cleavage | 3.5 | 11.153 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR1861o | Cleavage | 4.5 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR156a | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156b-5p | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156c-5p | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156d | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156e | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156f-5p | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156g-5p | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156h-5p | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156i | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156j-5p | Cleavage | 3.5 | 11.131 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR156l-5p | Cleavage | 3.0 | 11.131 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 14.143 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR444a-3p.1 | Cleavage | 5.0 | 22.34 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR535-5p | Translation | 5.0 | 18.401 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR535-5p | Translation | 5.0 | 16.345 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR444d.1 | Cleavage | 5.0 | 22.34 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR810b.2 | Translation | 5.0 | 19.937 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR1856 | Translation | 4.5 | 18.912 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR1861a | Cleavage | 4.5 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861b | Cleavage | 4.5 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861c | Translation | 5.0 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861d | Cleavage | 5.0 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861f | Cleavage | 4.5 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861h | Cleavage | 5.0 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861i | Cleavage | 4.5 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861j | Cleavage | 5.0 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR1861l | Cleavage | 4.5 | 20.168 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR2101-5p | Cleavage | 5.0 | 16.589 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR2928 | Translation | 5.0 | 8.958 | 1 | 20 |
| Osa03LNT0215300.1 | osa-miR5071 | Cleavage | 5.0 | 15.611 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR5081 | Cleavage | 4.5 | 12.604 | 1 | 22 |
| Osa03LNT0215300.1 | osa-miR5159 | Cleavage | 5.0 | 15.532 | 1 | 24 |
| Osa03LNT0215300.1 | osa-miR5340 | Translation | 5.0 | 10.333 | 1 | 23 |
| Osa03LNT0215300.1 | osa-miR5498 | Translation | 4.0 | 17.873 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR5499 | Cleavage | 5.0 | 18.149 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR5501 | Cleavage | 2.5 | 20.07 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR5512a | Cleavage | 3.5 | 11.153 | 1 | 21 |
| Osa03LNT0215300.1 | osa-miR171i-5p | Translation | 4.5 | 11.292 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0215300.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0215300.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0215300.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215300.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215300.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0215300.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)