© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0215400.1
GCTACTAGCATTGGACATGTTTATTGAATTCATAATCGTCCACAAATGAAATCTGCAATTTTGGCGAAAACCCCTACTGAGTCTAAGAAAAACAGAGTACATGCTTCATACACATTTTCCAATTGGCACGACAATTTAGTGATGCATCTTTTCACATTTATTTCTCTAACAATCAAGTTTGCTTTATACTGGTTCCGGCAGGTAGACCAGGAAGGCATATACACCTGTTATTCATCGGCATTTCTGGGTATTGTTACTCCAGAACCTGCAGTTATGACTTTGTATGCATTCTGGATTTGTCTTGTGACCGGACCTATTTTCCCGTCACCAATTTCACGACCATCAATCATTACGACCGGTGTGATTTCACCCATCGTTCCAGTAGTCCATACCTCGTCTGCAGCATGAAATTCTGATAAACTAATGCGACGTTCATGTAACACCAGGCTCTCTTTTACCACAAGATCCATGACAGTTGCACGCGTAATGCCTGGAAGGCAGTACTCAGCATGAGGTGTCAACACAATGCCCTTCTTAACCATAAAAATGTTTGTTGCATTTGTTTCTGATACAAAACCATCTTTATCTAGCATGATGGCATCCTCAGCCTGTGCAAGGTTACCCTCTATCTTCGCCAGAATATTGTTGATAAGATTGTTGTGATGTATCTTTGAATCTATGCTATTCGGAGAATTACGCCGCGTGGTGGCAGTTACCAACTTTATTCCATGCGAGTTATCATAAACTGGTGGTTTCCACTCTGCAAGCACTATCAAGGTGCATCCATAGAGGTTGAAAGCTGGACTCATTCCAGATGTCACCTTCTTCCCACGGGTGAGTGTAAGCCTTATATGAGCATTATTGAACATTCCATTTGCATTGAGAGTCCTAAAGATGGCATCCTTAATCCAATCACGACTAGGCACATTGCTGAAGGCCATAGCTTTTGCAGAATCAAACAACCTATCCAAGTGTTCATCAAGTTTGAACACTTTCCCATCGTATATACGTAATCCTTCCCACACAGCATCCCCTCCTTGTACAACTGAATCAAATACTGAAACCTTTGCACTATCACGGGGCAAAAGCTCATCTCCAACCCAAACAAGAATTTTTTTATTTTCAGGTACTGGAAGAGGAGGATCAGGTAATGTTGGTTGCGGGGATCCTATGGTTTTGCTTACATGGCGTTTCAGCACGTTGTAAAATGGCAAGCTTTGTTCAAGTAGATCATACAAAGCAAATGGAAAAGTCAAAGGATAACGGCGTGGCATAGAGAAACCAGTAGACTTGTGTACACTCCTATACCACCAGGGAGCCCAAATACCATCAAAGTCCTTGGGGCCAGCTTCCCATTGGAGCATTTGTGGCTGATAAGGAATACCTAGATCCTCACATAGTCCACTCAAGACAGCCTCAGGATCCCGTTGTAGATCGTCTGCATCTATCACAGGCGGAGGGCTCCCAAGCTCACACAATTCACTGTATATCGAGACAAGTTCCGCTATGCCGAGCTCAAAGAATGATGGTGGGACGACTTTGTCAAATGATGGCAGGATATTTAGAGGGTTGCGTATCAATATGAAATGTTTTCCCTTTTTCATCAGGTCACTTGACAGGTTAGGGAGGCGCTGCTTTGCAATGTGCTTGCAGTAACGATATTTTCTCTTCCCTGGCCCAAAAATGACTTCACTGATAACTTTGTTACCATCAGGATCCATGTTAGACAGAAGCTCCTCGCGATACGGCCTGTCGACGCCGGTGACGCGCAGGAAATTAGCGTAGAGCGGCTCGTCGAGCACCTCCATGTCATCCCTCTGGGCGAAGGAGTACATGAGGCTGGTGCTGAGGGAGCGCGGCGCCGACCACGCGTGGATCACCACCGGCTCCGGCTCCGGCTCCGGCGGCGGCGGCGGCATCGGTCTCCTCCGCAGCGCTCTCTCTCTCTCTCTCTCTCTCTGCTCTGTGCTCGGGAGGGGGGAAAGAGTGGCGTCAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0215400.1 | 3 | 13942294 | C | G |
| Osa03LNT0215400.1 | 3 | 13941491 | A | C |
| Osa03LNT0215400.1 | 3 | 13942677 | A | G |
| Osa03LNT0215400.1 | 3 | 13943166 | A | C |
| Osa03LNT0215400.1 | 3 | 13944048 | T | C |
| Osa03LNT0215400.1 | 3 | 13945145 | T | C |
| Osa03LNT0215400.1 | 3 | 13948080 | A | C |
| Osa03LNT0215400.1 | 3 | 13946540 | C | T |
| Osa03LNT0215400.1 | 3 | 13943500 | T | C |
| Osa03LNT0215400.1 | 3 | 13945344 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0215400.1 | osa-miR5809 | Cleavage | 3.5 | 23.077 | 1 | 20 |
| Osa03LNT0215400.1 | osa-miR5835 | Cleavage | 5.0 | 20.282 | 1 | 24 |
| Osa03LNT0215400.1 | osa-miR820a | Cleavage | 4.5 | 22.705 | 1 | 21 |
| Osa03LNT0215400.1 | osa-miR820b | Cleavage | 4.5 | 22.705 | 1 | 21 |
| Osa03LNT0215400.1 | osa-miR820c | Cleavage | 4.5 | 22.705 | 1 | 21 |
| Osa03LNT0215400.1 | osa-miR1424 | Cleavage | 5.0 | 20.396 | 1 | 21 |
| Osa03LNT0215400.1 | osa-miR1852 | Cleavage | 4.5 | 23.25 | 1 | 21 |
| Osa03LNT0215400.1 | osa-miR1879 | Translation | 3.5 | 10.197 | 1 | 24 |
| Osa03LNT0215400.1 | osa-miR1879 | Translation | 4.0 | 13.551 | 1 | 24 |
| Osa03LNT0215400.1 | osa-miR1879 | Translation | 5.0 | 16.105 | 1 | 24 |
| Osa03LNT0215400.1 | osa-miR2094-3p | Cleavage | 4.5 | 20.223 | 1 | 22 |
| Osa03LNT0215400.1 | osa-miR5083 | Cleavage | 5.0 | 22.795 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0215400.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215400.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215400.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215400.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215400.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0215400.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215400.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0215400.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)