© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0215500.1
GCCAACAGAAAACAGAAGTTAGTATATATATAGTAATATGAACACACTGATACAAATAATTTGAGAGGATAACGAGCGTTCTACATACAAATCCTCCTCGAGCTGTCATGTGAACGATTCTTGGATCTCTTCGAGTGCCTTCCCTTTAGTTTCTGGCACTAACCTTGCCACGAACAACACCGTGACCAAGCTCGCCGCAGAGAACAGAAAGAAGGTACCTGCAGAGTTCCAATCCATGAGGAAATTGAATGAGTAGGAAATTGCGAAGGAACCAATCCAGCTAACCAGCGTCACCAAGCTTCCAGCTATTGCTTTTATTTCAATGGAGAATATCTCAGACATGATAACCCAAGGAACAGGTCCCATTCCAACTGAGTATGCAGCGTAATATACCGATATGCCATAAAGAGCCAATGTTGGAACCAGTTGTGCATACACTCCTTGTGCCTTGAAGTAGAACGATAATCCAGTCAGAAAGCAGCCCAGAAATGTTCCAGACGCAGAGACCAGTAGAAGGGCTCTTCTTCCACTTCTATCCATGAGAAGGGCACCAAACAATGTGAGTGGAATCTGAAAAATTCCAATCAAGGTGGTCCCAAGCTTTCCAGAAAACCCTGCAGAGGAAAAGATATAGCTTGTATAAAATCCCAAGGCATTTATTCCTCCCAGCTGCTGAAAGACCATCAGGCCAACACCCACCTAAGCATCATAGTTTGATGATTATTTTATTTAATGACTGCAAACAAATTCTTTCTCTGAAACAAATCTTGAACCCTGGCCTCAGGTAAGCTACGAAGTGATTCGATATATTCTCTAATCCCAGCAGCCTCTTCAGATATGTCAGCATTCTCCCCTCTAAGCTTTTGCAGTGAAGCATTGAATTCTTTGACTCTCCCTGTATTGGCCAGCCACCTAGGAGATTCTGGAATAAACAGAAGCCCAACAAGGAGGAAAGCACAAGGCACTAATCCTACTAGAACCAACGAGCGCCATGAAAGAAGTGCCCCAATAATGTAAGCAGCTGAACATCCTGAGCAGATGAACAACTGATTTGAAGATGCAAGACCCCCTCGAAGATCCTTTGGGGCTATTTCAGATATGAACACAGGCACCACATAGGAAAGAACTCCAGTACAATAGCCGAGCAAGACTCTTCCAAGATAGAGCATCGTAGCACCATTGGCAAAATATATGGTAAACCAACCAACAATGCCAATAATTGCTGCCAACCCCATGGTCGTTTTGCGCCCAAGACTGTCTGCAAGGCGACCGCTAGTCAGAGCGCCAATCATTGCTCCAATTGTCAACACAGACCCAAATACGCCGTACTCTGAATTGGAGAGCCCAAAGTCGTTCACGATTCCAGCTTGCGCTGGCGCCGAATACCCCACCTGAATTTGTACATTCCATCAAAGCACACACATGAACACAAGCAATAGCCGCACGCCTTATGTTTTTTCTTGAGATTTAGCGAGCTCTCAGTGCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0215500.1 | 3 | 14154874 | A | G |
| Osa03LNT0215500.1 | 3 | 14155732 | C | T |
| Osa03LNT0215500.1 | 3 | 14155949 | C | T |
| Osa03LNT0215500.1 | 3 | 14156041 | G | A |
| Osa03LNT0215500.1 | 3 | 14157188 | A | C |
| Osa03LNT0215500.1 | 3 | 14157845 | C | A |
| Osa03LNT0215500.1 | 3 | 14158055 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0215500.1 | osa-miR1437b-5p | Translation | 3.5 | 14.093 | 1 | 21 |
| Osa03LNT0215500.1 | osa-miR166l-5p | Translation | 4.5 | 13.375 | 1 | 21 |
| Osa03LNT0215500.1 | osa-miR172b | Translation | 4.0 | 16.19 | 1 | 21 |
| Osa03LNT0215500.1 | osa-miR1425-5p | Cleavage | 5.0 | 14.947 | 1 | 21 |
| Osa03LNT0215500.1 | osa-miR1442 | Cleavage | 4.0 | 6.903 | 1 | 20 |
| Osa03LNT0215500.1 | osa-miR5490 | Translation | 5.0 | 17.982 | 1 | 21 |
| Osa03LNT0215500.1 | osa-miR5501 | Translation | 4.5 | 19.895 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0215500.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215500.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215500.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0215500.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215500.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0215500.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)