© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0216600.1
ACTATCGTCGGCGCAGCGCCCTCGATCTCCACCAGCGCGCCAATGTCCGCGCCGCCGCAACACCCAAGCCAGCGACGCCACCGATCCGCGCCGCCGGAACACCCGCGCCTCTCGCTCTCGTCTGTGCCGCTCCCCCCACCCCCTGCGCCCGCCGTAAACCCCTAATCCTCCGCGCTCCCCTCGCCCTCCTCACGATCTCCTCCGCGCCACCTCCATTCTCCTGCCAGTAGCCAGCCTCAAGGCCCTGCGCTACCCAGCCGCCCGTCGTTGCCGCTCCTGCTACGTGGATCTGGCGGCGGGATTTGCAACGGGGACGGCGTCGCGCCCTGCTCGTGCTGGCACAGAGGTTGGGGAGAATAGGATGTAAAGGTTCCTTGGCTTTGGTGAGTTATTCACCGTGATGCAGGTTTGCTTCCTCTCCGCCTCTCCGTTCATCTGTCAATTCGTGCTGATTATGCATGGCTGCATGTTATTGATTTTATTTTTGTGCGTTTGCAAATTGCAAACAACAGCTCTGTCCCTGGTGCAAATGGGAATGGGATCGCTCAGGGCAGTCTAAATCATGGAGGTTGTTTTGCCTGCAGGTTTCTTTCTTGCGTTAGATTGGTGGGACCCTCTCCAACGTGTACAGGAAGCTCCTTCCTCTTCTTGGTTTATCCTCGATTGGATTAAAAATCTTAGAAGAAATGTTAATTTTCAGTATTTAATTAGGAGCTGTTTTATCTGGGGATCATATCTTCATATGGCCAGCGATCATTTGTTTTGATGGTTTGACTTTGTTTCTGCTACTCAAAATTACATGTTTGTCGTCATCGGGTTTGCCTGTATATATACGATTAGCTGTGCTTCTAATTCCAGCCCCCAACGCTACAAGAGTAGTATCAGTGGAAGTGTTTCCACCTCCATATATAGTTTCTTATCAGTAGAATTACCGAATTACATCAGATATTATATATATTTTTATGCGCCATATTGGAAATCTTGTTTCATGGCTAATATTAGCATTCTTATTTTTCAGATCCGATAAATTTCAGGTTGCAATTTACAAGGATCTCTTTTGGCAGGACTACCAAGTTGCCTGGAATCTGGGGGGAAAAGTCAACATTTATGCACAACATCGGCAGCAGTGATCTGCCGTGCATGACCACACCGATCGGATACCTCCTATGCCTATATCCTGTTATTTCCAGTTGACGTCCGTAGTTCCTCCTCATCATTGAAGCTTATATCGATCGACCGATTGAGGCATGGCCCATGCTGACCAACGGTGTTGCCGCGGCCGCCATCTTCACCGTCACCGACATCTCTTAGGTGAGGTTCCGCCATCTTCACCATCACTGACAAACTGATCAGTTAATAAATTGTTGTCTTCTCCAACAAATACATGATACATCTACTATTCTGTACTTTCGCATAGTTACTCTGATTCTCCAATTGGTTTCGATTGAGTTTCTATCAGTTTTTTCTCTCTCTGTCAAAACTACAAGGGAAGGCCATATATGCCATGAGACTGATTGCACTGCAGAACACGTTCCTTCGTGCCCGGTAGTGCAATTTTATTTCTCTATTGCTACGTGTGGTGAATGAAAATTATGGTGGAATATTCTGTTTTTAGATCAATGGAAGCTATATGTAGAGGTAAAATGTGTAATAATTGCAGCCTGTTTTGTTGTAATAATTTGGGAGATGAATTAAGAACTGAATTTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0216600.1 | 3 | 15453355 | T | C |
| Osa03LNT0216600.1 | 3 | 15454225 | C | T |
| Osa03LNT0216600.1 | 3 | 15454376 | T | G |
| Osa03LNT0216600.1 | 3 | 15454488 | T | C |
| Osa03LNT0216600.1 | 3 | 15454783 | G | A |
| Osa03LNT0216600.1 | 3 | 15455017 | A | G |
| Osa03LNT0216600.1 | 3 | 15455042 | T | C |
| Osa03LNT0216600.1 | 3 | 15455108 | A | G |
| Osa03LNT0216600.1 | 3 | 15455179 | T | C |
| Osa03LNT0216600.1 | 3 | 15455359 | T | C |
| Osa03LNT0216600.1 | 3 | 15455424 | C | T |
| Osa03LNT0216600.1 | 3 | 15455449 | T | C |
| Osa03LNT0216600.1 | 3 | 15455450 | T | G |
| Osa03LNT0216600.1 | 3 | 15455593 | A | G |
| Osa03LNT0216600.1 | 3 | 15456189 | T | C |
| Osa03LNT0216600.1 | 3 | 15456222 | A | G |
| Osa03LNT0216600.1 | 3 | 15456405 | G | A |
| Osa03LNT0216600.1 | 3 | 15456943 | G | A |
| Osa03LNT0216600.1 | 3 | 15457172 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0216600.1 | osa-miR5806 | Translation | 3.0 | 13.409 | 1 | 21 |
| Osa03LNT0216600.1 | osa-miR166g-5p | Translation | 4.0 | 16.62 | 1 | 21 |
| Osa03LNT0216600.1 | osa-miR419 | Cleavage | 5.0 | 21.193 | 1 | 21 |
| Osa03LNT0216600.1 | osa-miR535-5p | Cleavage | 5.0 | 14.907 | 1 | 21 |
| Osa03LNT0216600.1 | osa-miR816 | Cleavage | 5.0 | 18.309 | 1 | 20 |
| Osa03LNT0216600.1 | osa-miR1874-3p | Cleavage | 4.0 | 17.246 | 1 | 24 |
| Osa03LNT0216600.1 | osa-miR2093-3p | Translation | 5.0 | 14.845 | 1 | 20 |
| Osa03LNT0216600.1 | osa-miR2928 | Cleavage | 3.0 | 10.532 | 1 | 20 |
| Osa03LNT0216600.1 | osa-miR5517 | Translation | 5.0 | 20.816 | 1 | 21 |
| Osa03LNT0216600.1 | osa-miR2868 | Translation | 3.5 | 11.995 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0216600.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0216600.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216600.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216600.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0216600.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0216600.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0216600.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)