© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0216900.1
CAAACACAAACACAAACACATGCAGTATTCATACATAGGAGTACAGTATACAGTAGCATATATGTATAGTACTAGTAGAAAGGCAGAAAAAGCGCGAGGGACGACGCCATCACGCACACTCTGCTAGCTACACACGCCACCATACAAACACACACAAGGAGCCCGAACTAACCTCGGGCGCGGCCCCGCCATCTCATCTCTCAACCTTTGGGGGTCAAAAAGCCATCGACGCATGCAGCACCAGGCCACCAGCACTGCACTTTGCATGGACTTCATTCATTCATTCCTCCTTCCTTCCTTTGCTTTGGATCACACCACAATGGAGGGGAGAAAAAAGATCTTTATAGCTTAGCCTCCCTGTTTTACTTATTGCGCCATCAACGCCATGAGAGCCTTTTTTTATGAGAGGGAGGAGGTGCCTACCAAGAGGCACTGCACTGAACTGACCCAGAAGAAAGATGTGACACCGGCTTGCTGCTAGGTAGTACTCTCCATCAGTGGATGGATGGATGAAGGTGCAGTGGTCGGTGATTCACTAGTAATATACTGCAATACTGAATCTTCATTGTAACCACTCAAATCATTGGACCCTTGTAAGCAAAGCACCATTGAGCTTTCACTCCAGTAGTCCTCAGAATCACCGAATGGAACTGACTGAGTTTCATTTCACCTTATTGCTGCTATAGTTTTAGCTCATTACTTGTATATATGGAGAGAGGGATAGGTATTGGGTTCAGGAACCAGAACAGAACCGTCATCGATCGAGGAGCTAGAGGGAAACAGCTCCCAGTGTCTTGACCTTGAGCTTTAGATACTTGAGATAGCATATCGCTTCATCAAGAACGGCTGTGGCATCTTTGGCAATGCCTCCAGGAACTATCTTTCTGAGTGCAGCAACAGTCTCTTGGATCCTCTCTCTTCTCCGCTTCCGATCATCGGGGCCATCATCACCTTCTGCTTCTTCACCTTCCCTCAGAGCAAACTGGTGATCGCTTTCCACTTCACCAATACAACACGACTGTGCGTCGTCGTCATGGCTGAGATGTTTCTGATCAACGGAGTGGTCAGGCCTTGCTGAGCTGGCTGTGTCAACCACAGATCTGTCGGTACCAGAGCTTAGTCTTCTTTTCTTTGCTGGTTGGGAAGCACCAGCGCTTGCTACCGACTCCACACTCATGGTGTCATTCTGCATTGGGTATTTCCTGACTCTGTTGTTGAGTTCTTGCACTTTCAAGCACCCTTCATCTGAGTCGGAACACAGGAGTGCATCAATCTCCTCAGTATTCTCATGCATACACTCAGTATTTTGTGCTCCAACATCAGTTACATTGGTCTCATTGCTACCTTGGAGCTCTGGAACTGTATCCAATGTCCCCTTGCTCAGGAGAGGACCTACAGTGAAGGTATTATTCACATTATGAAAGAAAACCAGAGGTCTCTTTCTCAGTGTCTCAGCTGTTGATAAGCCTACACTGGGTACCAATGTTGTGACAAATCTAGAAGAGAATGAAACAGGTCTGTCAGTAACTGATGCTGCAATAGACGGCATAGATGCAGCAACTCCAGAATAAATGTAGCCATCGCTGTTCAGATATGTTGGCAACGCCACTGAATTTGTGTTGTCGAGGCTAACATCGGGTGGGTGGAGATTGTTTGCAGAGCTCTCGGTCCATGGGGGATTAGACCAATGGCACCAGGGATTAACCTTCTCCCCCATCAAGAAACAACCAGCAAACAGGATCTTCACCAGAAAATTGAGATGAACAGGAAATTCTCCTGCTTTACTTTTGCTTCAGAAAAACTTAGAGCAGCACAGGTTCTATTCAACAGCAAATGGAAGGGAGGGAGTCGAACTACGTCACGGGCTTAAGAAGATGGCGGAAGTACTCGGCCTGGCAATCTTGGGATGGCTGGAAGCAAGCTATAACTCTCACAGCGATTCCATTCTCATGTTTAAACACGCGGAATCTCGTCTGAGCCACCGGTTGCCACACCATTAGTACTCCTGCCCGTTCTCCTTGAAAGAATTGCCAGGCAACCACAGAAACCCAAACAGCAATGCCAGCAACCAGATCTTCAATCCCAAACTTCAGAGACTAGAAGATCAGGATTGGAGTAGAGCAATAATGGAGGCAATTTACAGAATAACCCGGCAGTACAGGTTCAAGGAGATCCCTTTGCGGAAGATGTCTACCGAGAGAGCCAGCCACCGCATGCTGCCAGGGTACCCGTGCTAGTTTCAGCTCCTCAGACCCTCAACACTAGAATTACCTCTTTTATCCATGGGGAAGAAGACCGAAAGTATCCGAGCGGCTGAAGAACTCTACCCGCAGCGACAGACAACGCGAGACACGTCGATACAGAATCAGAACCAAACTAGCCCACGAATCTTTACGAGAAGAACATCACGGGGTCGATCGAGCAGAGCACCACATCCCCACCCAACCAAGAAAAACAAATCAAGCACTCACCAGATCGAGCAGGATGAGGAGGAGGAGGACGACGAATCGGCGATAGGAGCTGAGCACTCACACACCCGCCCGGGCCAAAGCCGAAGGAATTGAAGGGGAGGCCGACCGCGGCGCGTGCTGTTGCTCACGAGAGAGAGCCGCACGGCGAGACCGAGACGAGGACGAGAGAGAGAGAGAGAGAGAGAGACAGCGAGAGCGTGCGCCGCGGCGCGGCTTCTCTTATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0216900.1 | 3 | 15686412 | A | G |
| Osa03LNT0216900.1 | 3 | 15686670 | C | G |
| Osa03LNT0216900.1 | 3 | 15686741 | T | C |
| Osa03LNT0216900.1 | 3 | 15688080 | G | A |
| Osa03LNT0216900.1 | 3 | 15688341 | A | G |
| Osa03LNT0216900.1 | 3 | 15689123 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0216900.1 | osa-miR393a | Cleavage | 4.5 | 22.168 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR393b-5p | Cleavage | 4.5 | 22.168 | 1 | 22 |
| Osa03LNT0216900.1 | osa-miR815a | Cleavage | 4.0 | 15.709 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR815a | Translation | 4.0 | 14.904 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR815b | Cleavage | 4.0 | 15.709 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR815b | Translation | 4.0 | 14.904 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR815c | Cleavage | 4.0 | 15.709 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR815c | Translation | 4.0 | 14.904 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR1857-5p | Cleavage | 4.0 | 15.734 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR1862e | Cleavage | 3.0 | 14.352 | 1 | 24 |
| Osa03LNT0216900.1 | osa-miR2105 | Cleavage | 4.0 | 19.037 | 1 | 20 |
| Osa03LNT0216900.1 | osa-miR2876-5p | Cleavage | 4.5 | 19.516 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR396g | Translation | 5.0 | 19.416 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR396h | Translation | 5.0 | 19.416 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR396d | Translation | 5.0 | 19.416 | 1 | 21 |
| Osa03LNT0216900.1 | osa-miR5505 | Cleavage | 5.0 | 11.747 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0216900.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0216900.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0216900.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0216900.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216900.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216900.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0216900.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)