© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0217800.1
ACAACGTCAAATCGCTGTACCTAGGCAGTTTTGTGCTATATCTGCAAGAAAACCCACTGTATCTGTCGGGCAAACGGTGAGACCAAAAATACCGGCCCCAGTAAAGTTTCTATAGAAGAGAAATTCAATTACACATCTGAAACAAATTGAGATTAACAACACGGCACATTCAACACATATGAAGTGAAATAACGTTTGCACGGACACCCTTTCTTGGGATTCTTGCAAGCTTTTCCGATACAAAATAACCCAAATGCTTTCTTTGTTGTTCTTGCTCCGTTGTATGGCGAAGTAACTCTACTAAGCTTGGATTTCTTTGTAGTTTGCAACTCAGGAATGTTATTCAGCCTGGTAAATCCTCTTATACAAAGTCCCCATGATGCAATCGGACCATAGCCTACCAAATCATCAGCTGAGGTCACTTGAAGGGTGCAAACAAAACCGATGAGTTATGCCCACCGAATCCGAACGAGTTCGACAACGCCACCTTTACATCACATCTCTCTTTTTGTGATCCCACTAGAATGCTGACATCCACATTTTTCTCCGGGTTGTCTAAATTGATATTTGGGTGGACCCAACCAGTCCTTATAGCTTGTATAGCAGCCACAGCTTCTATTCCACCTGCAGCTCCTAGCAGATGACCCGTCATTGACTTTGTTGAGTTTACTCTAAGCTGAGGGTTCTGACCAAAACAGCGGTTGAGAGCTTCAAATTCCTTCAAATCACCCATCTGCGTCGATGTTGCATGGGCATTTACATAATTAATGTCTTCCTTTGCTACTCCTGCATCTGCTAGTGCATTTTCAATACAAAGGATAACCCCTCTACCTTCAGGATGTGGCTCTGTCATGTGGTATGCATCACATGTGAAGCTTCCTCCTAGAAACTCAGCATATATTTGTGCACCTCTTTGCTTAGCATGCTCAAGTTCTTCCAGAAGAAGCACACCAGCCCCTTCTCCCATTACAAATCCATCACGATCCACATCCCACGGCCGAGAAGCTTTTGCTGGATCATTATTTCTCTGTGAAAGAGCTCTGCAAGCCACAAAACCACCCAATCCAATCGGAATAATTGGTGCATCAGAACCACCACAAAGCATCACATCAGTTTCCCCTCTTCTGATATGATTAGCTGCATTTAGTATGCAGAAATTACTGGTGGCGCAAGCAGTAGAGATAGAATAGTTTGGGCCCATCCAGCCCAGATCCATCGCAAGTATTGCAGAACCCATGTTTGTAGTCGCAAAAGGTACACAGAATGGGTTCATCTTCTTGTAGGATACCCTCAATGCTTCAATTGCATCACTAAAAATCTTCATGCCACCCATAGCAGAACCAACAAGAACTCCACATCTCGATTTGTCCAACTCATTCATGACTTCTTCGGTGATTCCACCGTTTTCCAATGCTTTTTTCCCAGCAGTTATCAAATATAGCATGAACTTGTCCATTCTCTTAGCTAATTTTGGTGCTACCCAGCCATCAGTTGAGAAGGACTTGATTTCTCCTGCAATTCTCGTGGGGTACTTGGAGCAGTCAAATGCTTCTATCTCGCTTATTCCACTAACACCCTGTAGAAGGTTGTTATAAAACTCATCAGGATCATGGCCTAACGGTGTCACGACACCCATGCCAGTGACGACCACTCTCCGTTGTTTAATATCAGGCTTCTTGCTTTCCACAGCTCCCCTTTCAGGATGCAAAGCTATAGCCATGGGTATTCCACCAGAGCGCGCGCCCCTGCCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0217800.1 | 3 | 16372417 | T | C |
| Osa03LNT0217800.1 | 3 | 16373210 | T | G |
| Osa03LNT0217800.1 | 3 | 16374424 | C | T |
| Osa03LNT0217800.1 | 3 | 16374563 | T | C |
| Osa03LNT0217800.1 | 3 | 16374782 | T | A |
| Osa03LNT0217800.1 | 3 | 16375009 | C | T |
| Osa03LNT0217800.1 | 3 | 16375913 | C | T |
| Osa03LNT0217800.1 | 3 | 16377800 | A | T |
| Osa03LNT0217800.1 | 3 | 16377911 | A | G |
| Osa03LNT0217800.1 | 3 | 16378136 | A | G |
| Osa03LNT0217800.1 | 3 | 16374657 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0217800.1 | osa-miR6246 | Translation | 5.0 | 23.199 | 1 | 23 |
| Osa03LNT0217800.1 | osa-miR160f-3p | Translation | 3.0 | 22.8 | 1 | 21 |
| Osa03LNT0217800.1 | osa-miR160f-3p | Cleavage | 4.0 | 11.84 | 1 | 21 |
| Osa03LNT0217800.1 | osa-miR530-3p | Translation | 3.5 | 15.034 | 1 | 21 |
| Osa03LNT0217800.1 | osa-miR530-3p | Cleavage | 5.0 | 12.665 | 1 | 21 |
| Osa03LNT0217800.1 | osa-miR395w | Translation | 5.0 | 22.625 | 1 | 22 |
| Osa03LNT0217800.1 | osa-miR1855 | Translation | 5.0 | 16.011 | 1 | 21 |
| Osa03LNT0217800.1 | osa-miR1875 | Translation | 4.5 | 14.286 | 1 | 24 |
| Osa03LNT0217800.1 | osa-miR2100-3p | Cleavage | 4.0 | 18.447 | 1 | 22 |
| Osa03LNT0217800.1 | osa-miR2929 | Cleavage | 5.0 | 15.273 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0217800.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0217800.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0217800.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0217800.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0217800.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0217800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0217800.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0217800.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0217800.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0217800.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0217800.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0217800.1 | 3 | nan | Morphological trait | Panicle/flower | RZ452 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)