© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0217900.1
GGAAACAAGGATGCTACAATATATTATTGCAGAAACGGCACCAAGGCCGTTTCTATTATTCATAGGTAACATCCCAATAACAAGAGGAGACAGAGCACCAACCACACACCACATTCCACTGAACTCACCCCCAACTAAATCAAACTAGAAAACTCCCAAATTCAATCGACCTTACTTTCTTAAGGAAAAAGAGCAGTGCCTAGGAATGCAAAGCATCCTGAAATATCTCTCTTCTCTTTTCATCTCTGAAACCAGAGAATGGAAACAAAGCAAAGAAACTCCAATGCTCTCCTCTTTCAGAGTCTCAGCCTGAGATGTTGGCCAGCTCACTTGTTCGACGGCTCGCCCTCGACGGCCAACGGGACGGTGCTAGCCATGGTGCGGTACTTGAGGGCATACAGCATCTCAAGGTAGCGGCGGGTTTCACGCCTCTCCAGGTTCGAGACGTACTTCCAGAATCCGTAGACGCCGGTGAGGGTCATCAGCCTCTCAGAGTAGAGCTTCCAGGTGTATTTCTCCTCGATACGCTGAAGACCGCCCTGCGAGATCTTGGTCCAGTGGCTGGGGTCTTCCTGGCACTTCTCAAAGAACTCAACGAGCAGCGCCGAGGCCTTGTCACCCTGGTATGGGTCAATGTGGAAGCCAGACACTCCGTTCACGATGATCTCAGCTGGACCACCATAGGCGGTTGCGAATGTCGGGAGACCACAGGTCATGGACTCAACAACAGTGAGACCGAATGCCTCGTAGAAAGCGGGCTGCACAAAAGCACCCTTGGTGTCGCAGATGTAACGGTAGAGCTCACCGTTGCGGACACGGTTCATCTGCGCGGAGATCCAGCGGATGTGGCCATTCAAGTTGTATTGCTCAATAAGGTCAAACATCTTCTTGAACTCAGCCTGCTCCTCCTTGTCCTTAGATGGGTTGCCATGGTCACCACAGACAACCACAAGGTTAACCAGCTCTTGCAGGCGAGGGTTGCGACCATACAGCTCAACCAGACCAGTCAAGTTCTTGACACGGTCAAGACGAGCCATGGAGAAGATGATTGGCTTGTTCCTGTCCTTCAGCATAAACTTGTGCTCGTTGTTGTCAACTTCGCTGTAGAGCAACTCCTCAATCTCTGGGTGGAGGGAGGTGAGCCTCTTACGAGACTCAGAGTAAGGGAAGTAGATGGACATGTCCGCACCAGGCGAGACAATGTTAAACTTCGGGTCAAAAACATCAATACCGTGGACAACACGGTACAGACCAGGCATGGTGAATGCCATGTGAGACTCATACTGACCAACAGTGTCCTTGTTTCCGGCAATCTCTTGGAAGGTACTGGTGATGATGAAGTCAGCGTGGTTCATCGCAATCAAGTCAGTTGTGAACTGGCATGAGAAGTGGTAGTGATCCTCAAACTTCTTCCAGTAGAGGTCAGAGTTGGGGTACTTGGTTTTCTCAAGCGCATGGGCAATGGTACAATGGGTAACACCCATCTTGTGTGCAAGCAAGCATGCAACAAGGTTTCCGTCACTGTAGTTTCCGATGATCAAGTCAGGATTGGCCTGGAGCTCTCCAGCAATTTCGTGCGCGACATCATCAGTGAATGTTTCCAGGTACGGCCAGACTTCAAAACGTGAGATCCACTTGCGAACAATTCCATTTTCAGTTCTGAAAGGCACACGTAGGATGTGGGTGTGCTCGGTGCCAAGGACCTTCTCAAGACGCTGACCGCAGGTGGTGCCAGTTGCATCAGGGAGCAACCTGGTGACAATAAGGATGCGTGGTGTAATATTGAGACCTTGCTGCTTGATCCTCAGAAGCATCTCATTCTCCATAGCACGGACTTGGTCCAAAATGTAGACAACCTGCCCTCCAGTGTCAGGGTAACCCAAGACATTGGCTTGCGCGAAGTAACCGTGTGGGGACATAATGACAACATTGAACACCATTGGGATTGTTCCAAGGAACTTCTCGAGGGTGGACGGATCAGGGGCCTCAAGAAGGTCCAAAAGGAGGTGAATGGTCTCCTGGGAACGCTTGGCACAGTCACCCCAACCCTTCTCCAGACCAAGTTCCTGGAACCTGTGGTGGAATTCTGAGTAAGGGGTGTCTGCTGAAAGACCAGAAAGATGCTCCTCAGCCTTCCTCAGAGCACCTTGGAGAGCACTGAGACTGCGGATTCTGTCATTCAACATCATGGTCATGCCCTTGTAGTTGTGTGCACGAAGGAAGTTGAGCAGTGGGTACATGCTCTCCTTGTCATGGAAGAGCTTCGATGACAGATGCCTGTTGAGGAACTGCACACCATTGCCAATGGACTTCGACAGAGAAGGACGAGGGAAGGAGGCATTGAATGGCTCGAAATCCAGCTCAAGCACAAAGTTGTTGTTGGTGCCTTCTTCCACAAGCTGTTCCTTGAACTGCAAGTACTCGGGGACTGTCAGCAACTCAACAGCGAGCTCGCTCACATTGACCCTCACATACTCCCAGACACCGGGCCTCGGGCGGATGGCAAGGGCAACCCATGGGGAGATAACAATCCCCTCCTGTGCACTCCTCAGGACATCCTCAAAAGCACCGTCCTTCAGCTTCTCACGATCAGCCTCAGAGATTGCGTTGTTGTACTCAGCAATGATCTGGTGGGCCTGAAGCATTCCCTTTCCGAGGTTAACCAGCCTGGTGAAGACGGCGACGAGCTCATTGGGGTGGGCGGAGAGGGAGTCGCCGATGCGCTCCCTGACGCTGTGGAGGCGGCTCAGGACGCGGTCGCCGGCAGCTTCCCCCATTGCTCTCCTCTTCCTCTTGGCTCCTCAAGCCTTCCTAGGAAGAGGAAGGAAGTGCCTTCCCAAGAAACGAAGTAAACGCAAATAAAACGAACGGGGTTAACGGAGGTGGAATGGATTGGTGCGAGGATTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0217900.1 | 3 | 16302749 | G | A |
| Osa03LNT0217900.1 | 3 | 16303021 | A | G |
| Osa03LNT0217900.1 | 3 | 16303257 | C | A |
| Osa03LNT0217900.1 | 3 | 16303694 | G | C |
| Osa03LNT0217900.1 | 3 | 16305064 | A | C |
| Osa03LNT0217900.1 | 3 | 16305066 | G | A |
| Osa03LNT0217900.1 | 3 | 16305609 | A | T |
| Osa03LNT0217900.1 | 3 | 16305922 | C | T |
| Osa03LNT0217900.1 | 3 | 16306092 | A | G |
| Osa03LNT0217900.1 | 3 | 16306328 | T | G |
| Osa03LNT0217900.1 | 3 | 16306635 | C | T |
| Osa03LNT0217900.1 | 3 | 16306783 | C | G |
| Osa03LNT0217900.1 | 3 | 16307232 | G | C |
| Osa03LNT0217900.1 | 3 | 16301618 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0217900.1 | osa-miR810a | Cleavage | 5.0 | 24.525 | 1 | 21 |
| Osa03LNT0217900.1 | osa-miR1862a | Cleavage | 4.5 | 24.468 | 1 | 24 |
| Osa03LNT0217900.1 | osa-miR1862b | Cleavage | 4.5 | 24.468 | 1 | 24 |
| Osa03LNT0217900.1 | osa-miR1862c | Cleavage | 4.5 | 24.468 | 1 | 24 |
| Osa03LNT0217900.1 | osa-miR1862d | Translation | 4.5 | 24.468 | 1 | 24 |
| Osa03LNT0217900.1 | osa-miR2055 | Cleavage | 4.5 | 17.948 | 1 | 21 |
| Osa03LNT0217900.1 | osa-miR2055 | Cleavage | 4.5 | 12.895 | 1 | 21 |
| Osa03LNT0217900.1 | osa-miR2932 | Cleavage | 5.0 | 22.062 | 1 | 19 |
| Osa03LNT0217900.1 | osa-miR1862f | Cleavage | 4.5 | 8.717 | 1 | 20 |
| Osa03LNT0217900.1 | osa-miR1862f | Cleavage | 5.0 | 24.468 | 1 | 20 |
| Osa03LNT0217900.1 | osa-miR1862g | Cleavage | 4.5 | 8.717 | 1 | 20 |
| Osa03LNT0217900.1 | osa-miR1862g | Cleavage | 5.0 | 24.468 | 1 | 20 |
| Osa03LNT0217900.1 | osa-miR5484 | Translation | 4.5 | 17.622 | 1 | 21 |
| Osa03LNT0217900.1 | osa-miR5484 | Cleavage | 5.0 | 21.828 | 1 | 21 |
| Osa03LNT0217900.1 | osa-miR2097-5p | Translation | 4.0 | 19.306 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0217900.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0217900.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0217900.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0217900.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0217900.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0217900.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0217900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0217900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0217900.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0217900.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0217900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0217900.1 | 3 | nan | Morphological trait | Panicle/flower | RZ452 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)