© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0218100.1
GTTGCTTCACGACTGGATGAATGGCCTGATGATATAATTGTTTGGTCATTCTGTAGAGAGAAGCATAGATTGATTTCGGCCAGAATTAAACAGCATGGCGCCTTGTTACACCGCGTCAGTGTTACCTGTCTCCTGGCACATCCTCCTGGCACATCTTAATTTCCGAATTACAGTGTTGTTCGTCAGTCACATTGTAATTTTCAAACACGACTAGTGTGTATTTTTGGTTGATTTATTTGATGTGGCTTTCGGTCTTGTTTGGGGGAGTTTCTAGCTGCTGCAGCTTCTTCCAGGATAAACAGTCCAGCTTTTGGTCTAGATTCAGATTAGTTGTTGAATCCAGAAAATGAACTAGAAGCCAGAAGCTGTTAAACCCAACTTTTCTAGATTCTTAGAAGCTGGTTGCCAACAAGCTGCTGCTTCTTAGAATCTTCCCCAAATAGGCTCTTTGACACGTTACTGCTGCATAACAACCGGATAGACGTGTCAATGTGAAGACGTTTCGTACTAACGTGCTCAGCTGCTTCACTGAATATTTTAATGACATGCTAGCAGAAATTATTCCTAGAGATTTTAGAATACGTATATCAAGGAATCAAATATCATGGATTCGTTTTGACTTCAATTCAGTAAATAAGAAGCACGTTCCTCCAAAAGAACTCTTGTTTTTCTTTTAAATATGCAGAGGAGAGCATTGGATGCAAATCTCATGCCGTCACATAGTCGCATACAAAGCCTACTGAACTGAACTCCTGTTTCACTAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0218100.1 | 3 | 16789880 | A | G |
| Osa03LNT0218100.1 | 3 | 16790055 | T | C |
| Osa03LNT0218100.1 | 3 | 16790404 | A | C |
| Osa03LNT0218100.1 | 3 | 16790540 | T | C |
| Osa03LNT0218100.1 | 3 | 16789898 | C | T |
| Osa03LNT0218100.1 | 3 | 16790564 | T | G |
| Osa03LNT0218100.1 | 3 | 16790571 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0218100.1 | osa-miR164a | Translation | 4.5 | 17.451 | 1 | 21 |
| Osa03LNT0218100.1 | osa-miR164b | Translation | 4.5 | 17.451 | 1 | 21 |
| Osa03LNT0218100.1 | osa-miR164d | Translation | 4.5 | 17.451 | 1 | 21 |
| Osa03LNT0218100.1 | osa-miR164e | Translation | 4.5 | 17.451 | 1 | 21 |
| Osa03LNT0218100.1 | osa-miR164f | Translation | 4.5 | 17.451 | 1 | 21 |
| Osa03LNT0218100.1 | osa-miR5150-3p | Cleavage | 2.5 | 16.25 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0218100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0218100.1 | 3 | nan | Morphological trait | Panicle/flower | RZ452 | RZ284 |
| Osa03LNT0218100.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0218100.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0218100.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0218100.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0218100.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0218100.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0218100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0218100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0218100.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0218100.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
| Transcript ID | Chromosome | Locus | Trait | Value | Plus Minus |
|---|---|---|---|---|---|
| Osa03LNT0218100.1 | 3 | 16789845 | Grain-length(mm) | 14.8944006 | + |
| Osa03LNT0218100.1 | 3 | 16790404 | Grain-length(mm) | 9.642181396 | + |
| Osa03LNT0218100.1 | 3 | 16790430 | Grain-length(mm) | 15.47374249 | + |
| Osa03LNT0218100.1 | 3 | 16790433 | Grain-length(mm) | 15.16810036 | + |
| Osa03LNT0218100.1 | 3 | 16790514 | Grain-length(mm) | 14.56380177 | + |
| Osa03LNT0218100.1 | 3 | 16790564 | Grain-length(mm) | 14.43627262 | + |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)