© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0019600.1
CCTCAGATCCGTGTGCTCGGCTCCTTCCTCCCCTCTTTTCTCCCCGCTTTTCCCATCCAATCCCGGCGGCGGCGGTGGCTCGGTGACGAGAGGAGTAGCAGTGGTAGTGGTGGCTCAATGACGAGGAGGGGCGGCGAGAGCTCGGCGACAGGGAAGGGCGGCGAGAGCTCGGTTCCTCCCTCCCCTCTTCTCCTCTCCAATCCCGGCGGCGGCTCGGCGACAAGTAAGGACGGCGGGAGCTCGGCTCCTTCCGGCAACTGATGGGAGAAGACGCCCCTTGTGGAGAGCTGCTGCCGGTGCTGCCGTCGTCGTCAGCGCCGCCGTCGCAACCAAGGGGACACGGCTTCCTTGCTGGAGAGCTGCTGCCGGTGTTGCCGTCGTCGTCCTCCCCCGCCGATTACGAGTGCTACGTCCACTACACCGAGTGTAAGCGACCTCGCCCTCACCAGGATGCTTCGTTTCTAGGGTTAGGTTTGGGGTGCTTCAGATTGAGGAAATCTGGGGCTTAAATGGTCAATTAGGTTTAGGGGTTATGAAATATATGTAAATATACGTGCGGTAGTAGTACTGATGGAATAACAAAAAAGATTAGGGCATTTTGTTCGCCACAGCAGCATGGTTGGTACCATTAGGAACTAGAAACTGAAGAATACAAATCCAATTGATCTGTTATAATGATGCATGAAAGATGTTTTTCTTTCTTTTCTTCTATTGGGGTGGGTTCATTTCAGAAATACCCAATTTGTTAGGTTGACCACATGTCCCCATTTTGATCTGCGACGTCACAGACAATTCTCTTGTAATGTATATGTGCATTGTTTGTCAGAAACCTGTCGAATGGGAGGCACCATCATAATTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTGCGACAGCGACGAGCGGCTTCTCATCGCCGAGTTCATGCCCAACGACACCCTCGCCAAGCACCTCTTCCACTGAGTTTCCTCCCTCCCTCCAGTCCCCTGCAATTTAACTCCGGTTCTGTAGTTACGCAGCCAATGGTGCAGCGAGCTTGGATTTTTATGATGAAATGGCTAGCTTCGGTAGCTGATTTAGAATTTTGCAGCGGCAAAATAAAAAGTGATAGCTGAAGGAAAATCTTGGATTCATGGTAGTATTCATGCACATCAACTGGCATTAGACAATCTCACATTTTGCCTGCTTAATTTACACACAATCAAAGCTTAATTCTATGTTAACATCAGGATTTTGTTGTGCCTAAGTAACACCTCTTTTGCTATGGATAGATGAATCGGAAGCAGCAAGGAAGCATATGTCCTTTGTCGTTTGATTGGCCTCAACACTCAGGTCAACCTCAATAAGGTTTTTGTCTATTCTCTTAATGTTACCTTGCTAATTCAAGATCTTTTGATTCGTGTGACTTGGATATGACTTTGCTTAGGTCAATGTGTGAACGACTATTTGGCATTTGGCTGGATTTGGTGGTCAGTGACTTGTACTAGTGATGTATTGACCTGGTCAGTGAACCTGTGATGTAATTGAACATGTTTTGGATGGTGATTTGTGGATGTAATTAACTGACTTGTCATGTAACTTACTTGAGGATAACATGTGATCTTTTTTTTTTCTGAATTTGTGATAGCCTGTTTTGTGAATTTGTATTAAATATGAGCTGAATGTTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0019600.1 | 1 | 16232212 | G | A |
| Osa01LNT0019600.1 | 1 | 16232556 | G | T |
| Osa01LNT0019600.1 | 1 | 16232820 | A | T |
| Osa01LNT0019600.1 | 1 | 16234397 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0019600.1 | osa-miR5791 | Cleavage | 5.0 | 9.524 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR319a-5p | Translation | 5.0 | 17.333 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR319a-5p | Translation | 4.5 | 16.794 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR1425-3p | Translation | 4.5 | 14.791 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR1442 | Translation | 4.0 | 16.178 | 1 | 20 |
| Osa01LNT0019600.1 | osa-miR1850.2 | Cleavage | 4.0 | 9.216 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR1852 | Cleavage | 4.0 | 8.974 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR1858a | Translation | 4.5 | 14.093 | 1 | 21 |
| Osa01LNT0019600.1 | osa-miR1858b | Translation | 4.5 | 14.093 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0019600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0019600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0019600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0019600.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0019600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0019600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0019600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0019600.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)