© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0218600.1
GTGCTAAACATCGAAACCTGTTAATATTAAACCTTGAACCACCAGTTCATTTTTCAACCTTGGTTGGAACTTAAAAGTGTTTTTACATGACATATTATTGTCGTGGCGATGTGGCCCAAAAATCGAATTATTCTTCTTTCAGATAACACCACCACTCCCACTATAAAGTATTTGCAACCTACAAGTATAATTTGTCTGTAAAAATAGTGTATGACTAAAAAAATATGCACAAGTATATTCTTTTTTCAATATATTCTCTTGAAATAAATATTTATTATACGAACGAATTCACTATTCACAAGAGGAGGTCAATCCATCACTTTCAAGTTTATGGTAATCTGCATCCTACAATGTTGTCTTGAGGCTAAATCTCTGAATCATCACATCATAAACACTTTTTCTATGTGGATGTGCCACTCCAATCAAATCCTACTTCCCCAGGGTTCATGAAGAACATATTACACCAGATCCTCGCGAGCAAGCCCTGACATCCTGGCATCCACACAGGAGTCTGCCATTGAGCAAATCAGTCGCTTGGAATGCGCCCCCTCCATCACTTCTCTTATAGTAATCAACTGCGAGTAAATTAGCCCATCGATTCCCAGCTGCACCGTAGCATGTGTTCACCATGTCAGTAAGGCTCTTGGAGTGCTGCAGGCATGCGGTTACCTTCACCGGGACCGATGGGAAGTAGTTCACCAGGACTAACGACTTGGTTTTGTCATTCAGAGGTGCAGATTCTGCACGATTTGAGCATTTGCCAGCATCCATACCATCATCTCCGTAGTTGTTCTCGACCATGTAGTTCCACTGGTATGCGATTCCTTCAGTAGCCTGCTTTGACCTGATGGAGGTGAACACAAGGAGGCGCTGGTTGCTCGCAACCATGTCACTGACAAGAGGCCAATCCTTACCTTTCTGTGGCATTTTCGACACGGGAAACCAGTACTTCATCAGACCAGAGGCCTTGAACACGTTTGTCAGGCCATTCGGTGCATGCACGTAGTCTTCCAGGATCAACGTGACGATTTCAGATGGATTGGCTCCAAGGAAGGCTTCGATTTCCTTGAATGTGTCCAATGCAGGTTCGAATGCAGTGAAATCATTGCATTTCCCTCCATTTGAATGGCACAACCATACATCTCCTTTGAAGTCATATGTATCAAGCATCAGCGCGCGGACACCGTTATTTAATTGATCAGTGACTGTATCCTCCTGGTTGTCAAAGGTGATGCGTGGAACTCCAGTGTGCGATGGCTCCCCAACGATCGCAAATGAATTGTGTGTCGTGAGATACGCATACTTGTTGAATGGCAACGAGTTGTTAGTGAGTTGGAAGGGATTGGTGGCGGCGGAGCGGACGCAGCTGGAGCCGGCGAACTCTGGCTGGCAGTCGAAGCACCACTGCCCGCCGCCGCAGTCCACCGCCGTCGAGCATGAATCCCCCACATTCGCGGTGGCCGCCACCGAGAGGGCGACGAGCAAGACCAGAGCGAGTGCGGGCGCCGCTGTAAAGGCGCCCCCCATCTTCTTGCCTCTGCCAACCTACCTACCTACTACTACCTGCAGGGAGATTTCTGGGGAAGACGAAGACGAACGGGGGTTGGAGGTGGTTTGCTCTTGCAGTTGCAGAGTTCCGTAGGTTTGTCACACACAAACACCAGCTTTATAACTCATACGAAACGCCTACCAACTTTACTTGTATATATAAATATAAAACGCCTCCTCATGACAAGATATAGTGTAGATTTGGCAACTATATAATCAGATATGATTATGCATTTACTCATTGACGGTCCCCTCAGATGTCCATCGTCGCGTAAGCTCATGCAATTTCCAAGCACGAGGGAGCAAAATCAGAAGAAAAAAAAAAGAAGAAGAAGAAGAAGATTAACACGTAGCTGCACGTTAAGTTGTTGTTGCCCTGAATTACACGGCTGATTGGTGTGTGAAAGGAACAAATAGTAGTGTCGTTTTTTTTTTCCAAGAACACGAAAAGGTCTTTGCGCGCCATCGAGGAAGACGATAATGATTTGTAGAATTGTTCTTAATTTTGGGAGCGATTTTGGACGGGATTGAAAGCGAGCGGTTGGGCGTTGCTTACAAGAGTTTGTTTGGTCGGCAAAGACTTCGGTTTCGTCAGGTCGTTTGTTCGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0218600.1 | 3 | 17207743 | T | A |
| Osa03LNT0218600.1 | 3 | 17209079 | T | C |
| Osa03LNT0218600.1 | 3 | 17209332 | G | T |
| Osa03LNT0218600.1 | 3 | 17209622 | A | G |
| Osa03LNT0218600.1 | 3 | 17209871 | T | C |
| Osa03LNT0218600.1 | 3 | 17210140 | C | G |
| Osa03LNT0218600.1 | 3 | 17210299 | T | C |
| Osa03LNT0218600.1 | 3 | 17210555 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0218600.1 | osa-miR6247 | Translation | 4.5 | 18.335 | 1 | 21 |
| Osa03LNT0218600.1 | osa-miR417 | Cleavage | 5.0 | 20.931 | 1 | 21 |
| Osa03LNT0218600.1 | osa-miR1423-3p | Translation | 5.0 | 20.717 | 1 | 21 |
| Osa03LNT0218600.1 | osa-miR1875 | Translation | 4.0 | 23.038 | 1 | 24 |
| Osa03LNT0218600.1 | osa-miR1880 | Cleavage | 5.0 | 24.45 | 1 | 24 |
| Osa03LNT0218600.1 | osa-miR2105 | Translation | 2.5 | 9.925 | 1 | 20 |
| Osa03LNT0218600.1 | osa-miR2928 | Cleavage | 4.5 | 18.78 | 1 | 20 |
| Osa03LNT0218600.1 | osa-miR5524 | Cleavage | 3.5 | 12.845 | 1 | 21 |
| Osa03LNT0218600.1 | osa-miR5524 | Cleavage | 4.5 | 17.94 | 1 | 21 |
| Osa03LNT0218600.1 | osa-miR6245 | Cleavage | 5.0 | 13.566 | 1 | 21 |
| Osa03LNT0218600.1 | osa-miR159a.2 | Translation | 5.0 | 18.462 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0218600.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0218600.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0218600.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0218600.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0218600.1 | 3 | qGL-3a | Morphological trait | Seed | C80 | C1677 |
| Osa03LNT0218600.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0218600.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0218600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0218600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0218600.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0218600.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0218600.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0218600.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0218600.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)