© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0218700.1
CAACTCCAAAAAGACACGGATATTTTCATATTCTCAGATCCAAGTACCTTCAAAACGAGCACCTGAACTGCTTACTACCAAGGTAATGGAGGAAAGCATCTTCCATCAAAAACCATCAACTACTACATGATCAACTCAACTCTTCATAGGCAGCAAAAAGGGAATGCCAAGTCGCTAATACTTTGGATGCTCATACCCATCGTTCTTGGTCTTGGCCTCAAGAAACGAGGCACTCGCCTTGTCCAAAAACCAAACCAACTTACCGTCCGTTGGCTGAACCATTCTTGCAGGAATTGATGGAGCATCAGGACCCTCTGTACCGTCAGAGATGGCAAAATACACAGCCTTTGCCTTGTCTTCTCCGGTGGCCACTACGGCGATGTTCGATGCCGAGTTTATCACGGGAAGGGTGAAGGTGATCCTCTCCGGTGGCGGCACCGGAGAGTCGGTGATGTAGGTGACCCAGTCGTCCTTGAGCTCAAGTGCAGGATGGTTGGGGAACAATGAGGCTACATGACCATCAGAGCCGATGCTAAGGAGGATCAGATCAAACTTGGGGCAGTCGTTGCTCTCTGAAACTCCGACTGTGCGAATCTTGACCAGCTGACGGATGACGAATTCGTAGTCCGTCGCTGCATCCTCCACCGTCACATTGTCATTGATGGAGTAGACGTGACCATTAAGAATAGGCACCTTGGAGAGAAAATCTTCTTTTGTTGATTTATAGTAGCTATCCACATGGTTCTTAGCCACCGCACGTTCATCAGCCCAGAAGATGTACCATTTAGACCAATCCAGGGTTTTGTTGTATGGTGCTTCACAAAGTTTCCGCATAAAACTGATAAGAGGCCCTCCAGACAGGGCAATAGCAAAGTAACCTCTTTCCTTAATAGAAATTTCTGAAACTTGTGAAATATACTCAGCCAGATCTGTTGCCATCTCGTCTGAACTCTCAAACATCCTGATTTCGTTATTCTTCTTGGGTTCATATGAGGCCACAATTTCCCTCTCCATTGTTCTATTTTCTGTTGAACTTGAATGCCAGCTATTATTCCAACTGAGCATCCCTTGCGAACACACCTCTTTTTTGTTTTGTGAAAATAATTTAGCAAACTATAGCCAGATAGAAAACCGTAAATACACTCATGTCACTCAAAATCTGAAGTCCCAATACACTGTCAACAGAACAAGCATCTATTCCATTACAGCCCGGCAGAAATGATAATCAAGAAGTATAGCAGGTTAAGACGAAGCCACTGCGTAACTCAAATATTGTGCTGCTTAATGGTTAGACATGAACATTTAAAAAAACCCCAAGAAAAAAAGGTGTAAATAAGAAATATTTTTTAAAAACCATTAAGAGGTGTTCATCTGAAAAACATTATCAAAGAACCAACAATGTTTTGACCAGCAAATTATACTAGCATGAGAAAGGAAGAATAATTTGCTTAAATGTTCAACTCTCAAGGAAGGGGAAAAAGCTGACAAGAACTGTAACGGGAAGTGAGGGGAAGCAAACAAAGCAAAAGCTATGTTGCCACTGCAAGCTCTAGCAGCCATCATTTGGGCAAAGAGCTTGAGAGCACATCAAAGATTCCAAGCTTTTTTGTTTTCAGAATCACATAAAAAAGCATCCAAAAGGGAAGCAACTGGTAACTAGAGAGAGAGAGAGAAAGGAACTATTCTACTCACTTTACTACTACTTTACCCAGATCAAATTCAGAAGGGGGGAAAATAACAGTACAAATCAACCATAGGAAACTAGTACTGAACTGCTTCCAACAGCCATTGCTCAAGAAACGAGAAAAGCTTAGCTACCTGCACGAATCGAGCTGACAAAACAGTGAGAAAAGAAAAAAAAAAATCCAAACTTGTTGGGCAAATCAGCATCTAATCAAGTAAAGAGACACTCATTCGACCACCAATCTTGAGAGTTGAGACAGAACAGCCCCACAATCTAATCAGCAATGCCGTAACAGCAGAAGAAGACGGTAACGATCCGTCAGAAAAAGTAAAAGGTGAAGAACACAAGTACGCCCTGGTTCTTGGCTCTTGCAGCAGCAGCACCGGACTGACCGAGTGACCAACAATCCAACCAAGAACAAACCCAAGCCCCAACTCACAAGAACTGAAGAACCCACCTGCGGTTAGCATTTGCCCCTTCTCGAAGACTCGCCACAAGCCAACAAAGCTAGAGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAGAAGCCAAGCGAATCAAGAAAGCTGTAGATAAAATACGCACGCACGGGGCAGGTATATGTGCACAGGATGACGATGAGAGAAGAAGAAGATAAACTTATCGACAGGGAAACGAATTAACGAACCTTTTGTGTGTGTGTTACCGCTATTTTAATCCCAAAGCCCCTAATGGGAGGGATTTCGATCCGTTGTTTTTCCTCCAAAAGCTGTATCCTTCTCCTTTCTCTCGATCTCTCCAAACTCCAAGCAAGAGAGCAGAGCAGAGGCGTCTCGCGTCCGCTGGGTGGGAGGGATTAAAGAATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0218700.1 | 3 | 17288207 | G | T |
| Osa03LNT0218700.1 | 3 | 17292159 | A | C |
| Osa03LNT0218700.1 | 3 | 17290535 | C | T |
| Osa03LNT0218700.1 | 3 | 17290931 | G | A |
| Osa03LNT0218700.1 | 3 | 17291479 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0218700.1 | osa-miR5530 | Cleavage | 5.0 | 11.754 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR5543 | Cleavage | 3.0 | 14.62 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR812q | Translation | 4.5 | 17.138 | 1 | 24 |
| Osa03LNT0218700.1 | osa-miR395u | Cleavage | 4.0 | 12.591 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR396b-5p | Cleavage | 4.5 | 8.017 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR396c-5p | Cleavage | 4.5 | 8.017 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR166k-5p | Cleavage | 4.5 | 8.04 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR390-5p | Cleavage | 4.0 | 13.714 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR535-3p | Translation | 4.5 | 20.148 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR818a | Translation | 4.0 | 18.84 | 1 | 22 |
| Osa03LNT0218700.1 | osa-miR818b | Translation | 4.0 | 18.84 | 1 | 22 |
| Osa03LNT0218700.1 | osa-miR818c | Translation | 4.0 | 18.84 | 1 | 22 |
| Osa03LNT0218700.1 | osa-miR818d | Translation | 4.0 | 18.84 | 1 | 22 |
| Osa03LNT0218700.1 | osa-miR818e | Translation | 4.0 | 18.84 | 1 | 22 |
| Osa03LNT0218700.1 | osa-miR1847.1 | Cleavage | 5.0 | 21.453 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR395x | Translation | 4.5 | 15.708 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR812o-3p | Cleavage | 5.0 | 13.107 | 1 | 24 |
| Osa03LNT0218700.1 | osa-miR2275d | Cleavage | 5.0 | 19.988 | 1 | 22 |
| Osa03LNT0218700.1 | osa-miR396a-5p | Cleavage | 4.5 | 8.017 | 1 | 21 |
| Osa03LNT0218700.1 | osa-miR2100-5p | Cleavage | 5.0 | 19.903 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0218700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0218700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0218700.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0218700.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0218700.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0218700.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0218700.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0218700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0218700.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0218700.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0218700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0218700.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0218700.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)