© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0219500.1
CCTTGGGATTAAAAATACGATACATTCGAATACTTCCAAGTGAAATGCTACAATGGTATATATGTGCGCTTGCGGATTAATTCTATAACCATAAATAATAGGATCATTTCTGGCGCCATTGCTAGAATGCATATTTCTAGTAATGTCGTTGAGAAATACCACCAGTCTGACAAGAAAAAATAAACTTGTGTTACTGTTACACTATCATAAAAGGAAACTGATTAACAATTAAGAACAATTAAGCTCTTAGCGTTCCATGCATCCTATGCAACTATACAAGTAATGCTTATTTTTCAGTCACAAGGTGATCCACCATTTGGTTTTGTGTTTCTTGATTTTGTCTGTCTTTCTTGGCTCCTTGCTTCTAATCTGTGTCATTCATCCTTGCCGGGTGAATCCAGCCTATCACACTCAACCAACCCAACCCATCTGATTTGTTCCCATCCGACGATGCATGCGACCCATGCAACACTATGTAACAATTCACGCTGCATATTATTGATCCCTTTCAATGTTGCACGCATGTGAATCCTCCGGCTCCCACTAAATTCATTTGTTTGATTACCTCCCACTTTGCCAGAAATTGTTGGTTCCCTCATAATTTCATCCTGCACTCTGCAGAAACTCCTCCTAAATAGTCCTACCGATTACTGAACTGCCATTATATCCAGCTTCCGATTAGATTAAATGGCGATTTGGGCACTATAAAACATTGCAATCCTCTCTTCAAGTCCCTCCAACTCCACAATTCCTTGCACAAAGTTATGGTCATGAGATGCGATTTGGGCACTATAAACCACTGCAATCCTCTCTTCAAGTCCCTCCATTAACTCCATAATTCCTTGCACAAAGTGATGGTGTTAACAACAAAATTTGGCAAGCCCGAAGTCATCATCGGCCTAGAGTCAGTATCGGCTTCAGAGTCTTGGAATCGGCCGATGGGAGTCATCAAATCGCCTGTGCACTATTGCACTGTTCACTCTTCCTTTGTTCTCGATCAATTCAGTTGATATCATCGCGCCATTAGAATAAAAAGAACTGATGGTTAAAAAATGGGCAAAAATAGAGTAAGGACAACATAATTCTCATTAGTCACAAACAAATGAAGTAGGAAGATTAAGAACCAGGTATAATAATCTTCATTGCCATGAGGGAAAAGATGTGCTGGAGAATTGATTGAAAGAAAAAGGGGAGGCTGATCTTTCTTGATTCACCAAGGATGTAGAAGGTCGCTTCAAGCATTGACGAAAAATTAAACCTCCGTAGACTGTTTGTCATCTGTTTCTGGATCGAGACGATAAAGGAACTTCTGTTGAAAGGCTAGCACATATTGACGTGATTTGACGATGAAGCTGCCGAAATTTCCAACAGATTCAGCAGTTGTTGAGGTGGGGAGCTGTCAATTTCAACCAAAGATCCAAAAAAAAAAAAGTCGATCGCAAACAGCCCAACTGCAAGGCTACCATTGAGGAAGCTCTAAACAGTTGTGGTGTTGATTAAAAAGCATGATAATCTTTCTCCAAAAAAAAAAAGCATGATGATGGGCTTGATTGCTGCTATTAAGGTGACCTAGCTTTTCAGTTCCTGTGCTTGCTTCGGCTTGTTTTTGTAGCATGCAAACACCGAGCATGTCAACAGTCAAGAACCTGGGAAGCCGCTTTAATTTTTCGGCTTTCCCAGTCCCGGCGGAGTGTGGAGCCATGAAGAGACTGAGAGGAAGCAGGGAGCGGAAACGACATAGGTGTTAGTGGGCGGTGGTCGTTTCGCTTCTCTCGGATGTGGATTCGGAACGGCGCAGGAGAAGGAGAGTCAGCCATCGCTAGGGGCAGAGTGGGTCGCAGGGGGGCAGGCGAGCGCAATGCGGCACGACGCCGCAGCGCTTGTCCCCACGGCGTCCAGCGAAATGCTGCACGGGAGGCGGATGGTGCGGTGGGGAGCGAGTGCGATGTAGGGAGGCAGGCGAGCGCGATGCAGCGCGGCGCCGCAGCGCCTGTCCCCACGGCGCGCAGTGAGAGGGATGCGGTGGGGGAGGCGGAGCGAGATGCGGGAGAGGAAGCCGATGCGGGCGCTCGTGCAAGAGAGGAGCGATGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0219500.1 | 3 | 17874867 | A | C |
| Osa03LNT0219500.1 | 3 | 17874707 | C | T |
| Osa03LNT0219500.1 | 3 | 17873241 | A | G |
| Osa03LNT0219500.1 | 3 | 17873325 | C | A |
| Osa03LNT0219500.1 | 3 | 17873879 | A | G |
| Osa03LNT0219500.1 | 3 | 17873965 | A | C |
| Osa03LNT0219500.1 | 3 | 17874098 | C | T |
| Osa03LNT0219500.1 | 3 | 17874337 | C | A |
| Osa03LNT0219500.1 | 3 | 17874524 | C | T |
| Osa03LNT0219500.1 | 3 | 17875531 | T | G |
| Osa03LNT0219500.1 | 3 | 17875874 | G | A |
| Osa03LNT0219500.1 | 3 | 17876164 | A | G |
| Osa03LNT0219500.1 | 3 | 17876186 | T | C |
| Osa03LNT0219500.1 | 3 | 17876596 | A | C |
| Osa03LNT0219500.1 | 3 | 17877248 | C | A |
| Osa03LNT0219500.1 | 3 | 17877439 | C | T |
| Osa03LNT0219500.1 | 3 | 17877659 | A | T |
| Osa03LNT0219500.1 | 3 | 17877790 | T | C |
| Osa03LNT0219500.1 | 3 | 17877795 | T | C |
| Osa03LNT0219500.1 | 3 | 17877808 | G | C |
| Osa03LNT0219500.1 | 3 | 17877966 | T | G |
| Osa03LNT0219500.1 | 3 | 17874472 | A | G |
| Osa03LNT0219500.1 | 3 | 17877865 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0219500.1 | osa-miR5821 | Cleavage | 4.5 | 10.822 | 1 | 21 |
| Osa03LNT0219500.1 | osa-miR1432-5p | Translation | 4.5 | 14.639 | 1 | 21 |
| Osa03LNT0219500.1 | osa-miR1850.1 | Cleavage | 4.5 | 24.029 | 1 | 21 |
| Osa03LNT0219500.1 | osa-miR1850.1 | Cleavage | 5.0 | 11.163 | 1 | 21 |
| Osa03LNT0219500.1 | osa-miR2118h | Translation | 4.0 | 20.248 | 1 | 22 |
| Osa03LNT0219500.1 | osa-miR2118k | Translation | 4.0 | 20.248 | 1 | 22 |
| Osa03LNT0219500.1 | osa-miR5501 | Translation | 5.0 | 13.448 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0219500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0219500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0219500.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0219500.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0219500.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0219500.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0219500.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0219500.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0219500.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0219500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0219500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0219500.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0219500.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)