© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0219900.1
CTCAATAAATAGGTACAAAAAAACATGACATTTCATTTGAGTAATTCTCGAAATAAATTACAATTATTTCAGGTGCCTTAACATGCAACCTCTGATAGCTGTTTGATGTTTATGGCAGCAATTACCGTGGGCACACAAACAAAAAATATTATTTATACACATGCAAACCTCCATTTGCAGGTCATCATACATTTCGTCAAGCAAAGCATGTTGCGAGTGTCCATCGTAACATAAATTATTTAAGCATTATTTACTCTTCGTATATTTACAAGATGCACCAACGGTTTGCTTCATTAGTACTCGCCGATCACAGCATCACCTGCGCTGCTGCTAGCCTTGCAATTGGAACCCTGAATGGGGAGCAAGAAACGTAGTTCAGCCCAACCTTCGCGAAAAATGCAACTGAAGAAGGCTCACCACCATGTTCCCCACAAATGCCCACCTCTAAATCAGGCCTTGCCTTCCGGCCCCGCTCTACGGCAACCTTAACAAGCTCCCCCACTCCCTTCTGGTCAAACACCTCGAAGGGGTCATTCTGGAGGATACCCTTTGACAAGTAGGTTGGCAGAAACTTGCCAACATCGTCCCTGCTATAACCAAATGTCATCTGAGTCAGGTCGTTCGTCCCAAACGAGAAGAATTCGGCTAGTGCTGCTATCTCATCAGCTATAAGAGCAGCCCTGGGAACCTCAATCATGGATCCAATTTTGTAGCTAATGGTTGTTTCTGCATTTGCAAAAACCTTTTCGGCAACTTCACGAATTACATCTACTTGTTGGGCGAGTTCCTGAGGTGTTCCAATGAGAGGCACCATTATCTCTGGGAAAACTTTAACACCTTGTTCAGTCATAGAAATAGCAGCTTCAAAGATAGCACGGGCTTGCATTGCTGTCAATTCTGGGTATGATATCCCAAGCCTGCACCCACGGAAGCCAAGCATTGGATTCACTTCAGAAAGTTTTTCTATTCTTGTAAGAATTTCCTCCTGAGTATATACGTTTCCAGAAGACAACAAACGAACCATATCCTCAACGTTACCCTCTGGAAGGAATTCGTGGAGTGGAGGATCCAAGAGTCGAATAGTCACAGGAAGTCCATCCATTGCACGGAAAATTCCTTCAAAGTCAAGTCTCTGATATGGCAAGAGGCGATCTAGTGCTATCTGCCTGTGTTCAATTGTTTCCGCCATTATCATCTGTCTCATGGCCTTTATCCTTTCATCAGAAGAGAAGAACATGTGTTCTGTTCTGCACAACCCAATCCCTTCCGCACCGTTATTTCTTGCAGTCAGTGCATCCGCAGGAGTATCAGCATTAGCCTTGACCTTGAGTTTCTTAACTTCATCCACCCAAGACATGAATTCTCCCAAATCACCACTAAGTGCTGGTGGGGATAGAGGCAGCTTGCCCAAAATGACCTCTCCAGTCGAACCATTCAGTGACAACCATTCACCCTCACAAAGCACCTTGTCGGCAACCAGTACCACCTTCTCAGCATCATTTACACGGATACCCGAGCATCCTGCCACACAACATTTTCCCCATCCACGGGCTACGACTGCTGCATGAGATGTCATACCACCTCTGGCTGTAAGAATTCCAGCAGCCGCATTCATGCCACCAACATCCTCTGGGCTTGTTTCAGTCCTCACCAGAATGACAGATTTTCCTTGTGCATGCCATGCTTCAGCATCGTCAGCTGTGAAGACAATCTGGCCTACAGCAGCTCCTGGTGATGCAGGCAAGCCTGTAGCAATAACTTTGTCTCCATATGACGACGGGCTCTCAAACTGGGGATGAAGAAGCTGGTCCAAGTGCCGTGGTTCCACCATCTTAATTGCTGAACGCCGGTCAATCAGTCCCTCATTGACCATGTCTACAGCAATCTTCACAGCACCTTTGCCTGTGCGCTTCCCTGTTCTGCATTGCAGCATCCAAAGTCTATTTTCTTGAACAGTGAACTCAATATCCATCATTTCTTTGTAGTGGCTTTCCAAGATTTTGCAATTCTCAACTAGTTCTGCATAAGGCTCTGGCATGCAATCCTTCATGGTATCAAGATCTTGTGGAGTTCTGATTCCAGCAACCACATCCTCACCCTGAGCATTGACAAGGAATTCACCATAAAGTTTTCTCTCTCCAGTACTAGGGTTCCTAGTAAAGAGAACACCAGTGCCTGAAGTGTCACCCATGTTGCCAAAGACCATGCACTGAACATTCACAGCAGTACCCTTTAACCCAGTGATCTGGTTAATGCTTCTGTACTTCTTTGCCCTTGCGCTGTCCCATGAGTTGAAAACAGCCAACACAGATAAATGCAGCTGCTTCTTTGGATCTGAGGGAAATTCTTCACCTTTGGCCTCCACATAAACATTCTTATATTGAGCAACAAGTTCTTTCAAATCCCTGGCAGTCAACTCGGTGTCATTCCTCAAACCTAAAGCTGCTTTCATGGCTTCAATTTTCTCCTCAAATAGTGAATGCGGTATGTCCATAACCTCGGGCGTGGCCCCAAATGCGTCGCGCCGCCGCCGTACGCCGGTTCAGCGCACGCGGTTCGCCATGTCCGGGGATGCCACCCCCATGGACAAGGTGCTGCTGCCCCGACCGCCCCTCCTCCTCCAGAGCGACACATTGCCCCTCCGGTGACACAGCCAAGGAGGTCGCGCCAGGCGGCCGGCTCGCTCGCCGGAGTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0219900.1 | 3 | 18154182 | A | G |
| Osa03LNT0219900.1 | 3 | 18154812 | G | A |
| Osa03LNT0219900.1 | 3 | 18153379 | A | G |
| Osa03LNT0219900.1 | 3 | 18153552 | A | C |
| Osa03LNT0219900.1 | 3 | 18155979 | T | C |
| Osa03LNT0219900.1 | 3 | 18156584 | T | C |
| Osa03LNT0219900.1 | 3 | 18157368 | C | T |
| Osa03LNT0219900.1 | 3 | 18158901 | A | G |
| Osa03LNT0219900.1 | 3 | 18154695 | G | A |
| Osa03LNT0219900.1 | 3 | 18153165 | T | C |
| Osa03LNT0219900.1 | 3 | 18153245 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0219900.1 | osa-miR5543 | Cleavage | 3.5 | 11.754 | 1 | 21 |
| Osa03LNT0219900.1 | osa-miR6252 | Translation | 5.0 | 13.449 | 1 | 23 |
| Osa03LNT0219900.1 | osa-miR5079b | Cleavage | 4.5 | 16.475 | 1 | 22 |
| Osa03LNT0219900.1 | osa-miR5079b | Cleavage | 5.0 | 19.211 | 1 | 22 |
| Osa03LNT0219900.1 | osa-miR159e | Cleavage | 5.0 | 19.649 | 1 | 21 |
| Osa03LNT0219900.1 | osa-miR5079a | Cleavage | 4.5 | 16.475 | 1 | 22 |
| Osa03LNT0219900.1 | osa-miR5079a | Cleavage | 5.0 | 19.211 | 1 | 22 |
| Osa03LNT0219900.1 | osa-miR2093-5p | Cleavage | 4.5 | 10.944 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0219900.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0219900.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0219900.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0219900.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0219900.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0219900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0219900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0219900.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0219900.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0219900.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0219900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0219900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0219900.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)