© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0220600.1
GTGGCATCTCGTGATTTTAAAGGATTGTTAGAAGCATTCATTCTCAACACACAGCCCATGTAGGATGAGCTTATGAACCAATTTAATATCGGTCAAAAACTGAAAGCAACACTACACATATTGCACGCATTGCCAAGGATCGCAACAATAAATACCTCATCATGTTTGCCCCTAGCTCACAGATATGAACAAAGAAAAAGAGAAGACTTAATTTGTCATTGGCAACATGGTGATCAAGCAGGCACATCGCACCGGCGCCTCCCATTTCAGTTATAGCTGGCCAATACGATCCTGAAGCATCTGCATGAGTTTGGGGTTCTGCTCCAAAAGCTTACAAAGCTTGTCACGATCACTCAACAGACTCTGAATAGCTTCTGGAGATGAAAAAAAATGATTTAAATTCATCCCAGAGTCCATCTGCTGTTGTGCACTCTGCCCAATCGGTTGCAAGACAGACTCCTGAGTCTGATGGTAAAATTGTAGTTGTGGAACATGAAGCTGGTTCGGAAACTGCAATGGCACCTGAGGCTGAATAGTATTTAGTGGATATGGCATTGGCTGCTCTTGTGGTTGTTGAAGAGAACCTTGGAATGTTTGAGATGGATGTGGCTGTGGAGGTGGTGGTGGTGGTGCTCGTGGTTGCATTGAGGAAAGAGAAGGCTGGGGATTAGAGACACTCTGTGCAAGGCCAGATGAGAGTTGGATTTGAAGAGGAGTGCCAAAAAATGGAGGAGTTGAAGGCCTACCAATTATATATTGTGATGCAAGTGATGGCAAAGAATTTGAAGCAAGTGCACCACCAGATGCGGGATTTGTCCCTAAAGTTGCATCATTGATAAGGGATGCAGGTGGAGAAGGCTGGAGAACACCAGACCCTCCTTGATTATACAGTGATCCTGGAGGCCCAGAGTCCATTGCAGCATGTTGGGTTGCCAGAACTGGCCGTAGAGGAAGGGGTGACACTGGCCGAGTAGATGAACCAGAGCTGAGGTGTTCCATAGGGATCCTATTTACTGGAAGTGTGCTCCACAAGAACTTGGCATCAACACTTGGCAATGCATTTGATGATGAATCACCGGTGCTTGGTAGGACATTTTCAGTTTGAACCTGATGCCCCACAAATGAAGGCATACAAGCGTCAAAAGACTGCATTAGATAACTAGGAGGAAAAGGTGGTGGCCCATCTCTAGCAATGTAAGATGATGGTTGCCTTTGAATTGAATCAGGATTTTGTAGAGACGTAGAAGAAACTGGTGGGGGCATCGGTGGCAAAGGTGGCTGGCTGTTGTAAAGTGTACGATCATGTCCATGAGATCCAGAGGACACCGAACTCTCAGCCAGCTTATGTGGGCTTCTTTTCCGATGCATATTTGGAGGTAATTGTCGCAGTGTTGCTTGTGCAGCATGTGTGCTATAACCAGGTATAACCTTCAATCCAGTAGTAGGAGAGATAAATGGAGATTCGTCCGCATGATCGGGGAACATGACCTTCTCTGGGCTAGAAACTGAAAATTTTCGCTCAGAAGGGATGTTAGATTCTTGACGGATTGCTGTCTGTGAAGATATGACAGTTTCACAAGCTTCATCACTCTCAGATACAACTGTACCAGAAAACAGATTTATTCCATTCTGCTGATTTTCTGTCTCATCAACAACGGGACCTGGAGAGTTCTCCCCAATAATGACAGGTGGTGATTGCAGACTGTCATCTGGTTGAGGAAAAGGAAGTTTATCATCTGATCCTGACTCCTCATCAAAGATTATGTTGATTTCTTGATCATCATCAAGATCAGCCTTTGGTTGTCTCGGTTTCTCTGGCTTGGTAGAGACATTGTCATCCAAAGTTGCCTTACTTCTTACCTGAGTTGCATCCCCAGATGGCGCTAGAACAGGATTTTGACGTTCCCTCTGTCTTGCCATAAATTCATCTACATGAATGGATGGAGGCCTTCCACTAAGTGCTCCACGTGGAGTAGAACTTACAATATTTGATGCACTGCTTGCACCTTCTATGTTTCTCTCTCTTGCGACATAGTCATCAACATGCATTGAAGGTGGTCTACTTGTGTTCGGTTTCCGCTGGCGGAAAGTGTCTCTACGCGTATGACCTATAGAGGCACTAGGTGTATTTAAACCTCGAGAGAACTGTCCACTAGGTTCATGTGTTTGATTGTCCCTTACACGTCTACTTGCGCTATCTCCTAGTGCCAGTTTTCTCCTGGCAGATTGGCTCGGGATTAGCTGTTTATCAATAGAACAATCAGGCAACTCCCACACCATCCTCTTGCTAAAGTCAGACACTTGGCATCCAAAAGGTTCTGCAAAATCACCAAAAGCCTTCCAAGCATTGGTAAATAAAAGAGCAGGATCATCATTTACTGACACAAAGTCTATGGAAGGCATTAGATGAGAAGTCATGACAATATTGTGGAACACCCCAACTGGTATTGTGCTCTCTTCAAGAACCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0220600.1 | 3 | 19587179 | A | G |
| Osa03LNT0220600.1 | 3 | 19586265 | G | A |
| Osa03LNT0220600.1 | 3 | 19586579 | T | C |
| Osa03LNT0220600.1 | 3 | 19587323 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0220600.1 | osa-miR5533 | Translation | 5.0 | 22.068 | 1 | 21 |
| Osa03LNT0220600.1 | osa-miR5815 | Translation | 4.0 | 20.686 | 1 | 24 |
| Osa03LNT0220600.1 | osa-miR417 | Cleavage | 4.0 | 11.11 | 1 | 21 |
| Osa03LNT0220600.1 | osa-miR443 | Translation | 5.0 | 12.026 | 1 | 22 |
| Osa03LNT0220600.1 | osa-miR810a | Translation | 5.0 | 12.555 | 1 | 21 |
| Osa03LNT0220600.1 | osa-miR1426 | Cleavage | 4.5 | 19.229 | 1 | 21 |
| Osa03LNT0220600.1 | osa-miR1876 | Cleavage | 5.0 | 14.17 | 1 | 24 |
| Osa03LNT0220600.1 | osa-miR827 | Translation | 5.0 | 23.499 | 1 | 21 |
| Osa03LNT0220600.1 | osa-miR2921 | Cleavage | 4.0 | 16.335 | 1 | 24 |
| Osa03LNT0220600.1 | osa-miR2921 | Cleavage | 5.0 | 24.3 | 1 | 24 |
| Osa03LNT0220600.1 | osa-miR812n-5p | Cleavage | 4.5 | 18.286 | 1 | 24 |
| Osa03LNT0220600.1 | osa-miR5083 | Cleavage | 5.0 | 22.305 | 1 | 20 |
| Osa03LNT0220600.1 | osa-miR5144-3p | Cleavage | 4.5 | 14.495 | 1 | 21 |
| Osa03LNT0220600.1 | osa-miR5340 | Cleavage | 5.0 | 16.323 | 1 | 23 |
| Osa03LNT0220600.1 | osa-miR5522 | Cleavage | 5.0 | 16.648 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0220600.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0220600.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0220600.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0220600.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0220600.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0220600.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0220600.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Osa03LNT0220600.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0220600.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0220600.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0220600.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0220600.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0220600.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0220600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0220600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0220600.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)