© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0221100.1
CAAATTTATAAGTTACTGATGTAATTAACTCCCAACGGTAAGTTTTGTTAGGCAGAACAAAGTATAAATCATCTGATAATATTCTGGTCTCAAGAAATATAAAGCCCAGAAAAATGGGTCAGGAGAGGACAAAAAAACCTCTTCCACATCAGAAGCATGACATAGATGACCCATCAAAACTACTTGAAGCTCAGCTCAAATATCACAATTCTCGCTCTGAAACAAGTTTTTGGAATGCTTGTGACGACAAAACCAGCCCTTCTAACGAATAGGGTGGTACTGTGCTGATACTCGTTTCGGTGGAAGCTTACGGAGGATGAATAGGACAAGAGCAGAGGGCAGTATCTCCGTTAACATATAGTAAAAGAAATCCAGTATTGGATGATCCAAAACCTCAAGAGATAGATCAGGATCAAATGATGACATCGCCACCACAATGCATCTTATCAAGAAACATGTGAAGCAAATTGCTGTCACAGTCCCAACCTCATAGAGCTTCTTTCTGCGGCCCTTTGATTCAATCGGAAAACGCCTCAGCATGAAAAATAGCCTTCCACCATAAATTAAGAATCCCAAAAGAGCTAAGAATGAGACAACTGATATAAAAATTTTGCTCACAGGCTCTAGCAGAGGACTATCATTTGTCCCAAGGTATATCCAAATACAAACCTGGATTACATATATAACACCATTAACTGCCATGTATATAATCCTTAGCTTGTCAGTGGGAAGATTCTTAGCCTGATGGTATATTTCTGCCCAGAACAGCACAAGTAGCGTGTATGTCGAGAAAAATAGAAGACCAGGAAGATCCAATAACACCAAAGTATACACTTTTGTTTGAAAAAGGAACACTTGAGCATGAAATCCAAACACGACAGCACGAACTCCGTTTACAACAAAGTTCATCAGATGGAAAACCTTCTGGGTAGTCCAACCAAATTCAGGCACTCGCAACTGAATTCTGATCAATTGAACCAGCGCGACGGCGGAGACGAGCGCGTAGGCGGCGGAGAGGGAGAAGAAGGCGCCGTCCTGCCACGCCGGCGACCCGTTCACCTCCTCCCACCAACCCCGCAGCGCCAGCGCCAGCGCCACGGCAGCCATCTCCGGCGTACCCGCGAGCGCCGTCGCCGTCGGCAGGGACGGCGAGGGGACCAGCTTCCTCATCTCCGATCTCCCACCTCTGTCTCTATCGCCGTGTCGTGGTGCGGGCGTCAGCGAGAGAGGCGATAGCTCCTCTTCCTCCTCCCTCCTCCGCCTCCTGGGAAGGAAAGATCGAGTCGAGGAGATTAGGCAGGCGGCGTCTCCGTCTCGAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0221100.1 | 3 | 20425868 | A | C |
| Osa03LNT0221100.1 | 3 | 20421626 | T | A |
| Osa03LNT0221100.1 | 3 | 20421702 | C | T |
| Osa03LNT0221100.1 | 3 | 20423660 | A | G |
| Osa03LNT0221100.1 | 3 | 20424317 | C | T |
| Osa03LNT0221100.1 | 3 | 20423891 | A | G |
| Osa03LNT0221100.1 | 3 | 20424566 | T | A |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa03LNT0221100.1 | DTM_#DNAt_MULE_japo_Os0229 | Chr3 | - | 20424010 | 20424517 | 507 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0221100.1 | osa-miR399h | Cleavage | 5.0 | 13.237 | 1 | 21 |
| Osa03LNT0221100.1 | osa-miR399k | Cleavage | 5.0 | 13.237 | 1 | 21 |
| Osa03LNT0221100.1 | osa-miR435 | Cleavage | 4.0 | 11.12 | 1 | 20 |
| Osa03LNT0221100.1 | osa-miR5339 | Cleavage | 4.5 | 18.515 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0221100.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0221100.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0221100.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0221100.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0221100.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0221100.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0221100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0221100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0221100.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0221100.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0221100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0221100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0221100.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0221100.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Osa03LNT0221100.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0221100.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)