© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0222000.1
ATTATGAATTTGCTATATTATATGATTCTACCGCTATATGTACCAATCGTAAGTAAATACACTAGTATACTTTACATGGTATATAGTAGTATATTTCTATGGCTGTACTTGAAGCTTGAAAAAAGTGGAATCTCACAAGCAGCTCGATCGATCAGTACACCGTGAAGATGAGATGAAGCCTACATAGCAGCGAGCTGCCTAATGTTCACGGGGAAGACGAGCGGCGGCGAGCCGTCGAACGCGACGGCGGTGAGCATCCGCGCGGTGGCCTCGGTCGGGTGGTAGAAGTCCCAGAACACGTAGCCCGTCCGGTTGGCGCAGTAGAAGCTGACCGGGGTGCAGCCGATCTTGGCGTTCATGTCCCCGAGGCCGCAGCACGCCGCCCGCGCCTCCGCGAACCCGTACGCCGCCGGCCGCTCGATGTACCGGAGCAGCGCCGCGCTGGAGTCGAACACCGCGTAGCGGAGGCCCGCGCGCCGCTCGGCCATCCCGCGCAGCAGCGACGCCGCCGCCGCGTTGTACCGCGCCGACGCGTCGTTGGCCTCGCCGCTGCAGCCCCTGTCGGCGCTCAGCTCCCGCAGCGACGGGCAGCAGCCCACCGGCCCCGTCCCCAGGAACAGCACCCTGCGCGCCCCGAGGTCGTACAGCCTCTGTAGCTGGCCGGTGAGCGACTGGATGAGGGCGTCGACGAACTGCTCCATAGGGTTGGTGGCCTTGGCGGCGGCGCTGGACCTGACGTAGCCGATGATGTCGTTGCTGCCGATGGTGATGGCGAAGAGGGATTTCGCCAGGTGGCTCGCCGCCTGGGCCTCGCCGAGGCTCTGCACCAGCGACGCCTGCACCTTGGAGTAGTACTCGATCTGCTTGTCGAAGCTGATGCACTGATCCTTGTTTGTAGAGTTGAAAACTCCGGCGCCACCTGAAGCAAAGTTGACGCCATTCACGTAGTTAGCACTGCTGCTTGACGATATGGCGAGGTACGGTGGAGATGTCGCCAACCCAAGGTTCTCAGCGAGGAAATCGGGGAAGTTCTTGCCGTTGCTGAAGCGGCCGGTGGCCTTCCCCCCCGGGTAGTCGATCCCGTTGTGCGGGAAGTCCGCCTTGAGCAGCGTCAGCAGGTGGTTGTTGTTCCCCACGTCCGCCAGCGAGTCGCCGAGCACGTACACCGCCGGCACCGCCGCCGCTAAAGACGAGGCGGCGGCGGCGACAAGGACGACGATGGCGAAGGACGCCGCAGCGATTGCGTTATTACCAGCATCCATCGATCGAACTACAGTAGTACGTACAGCTTAGCTGATGCTTCTCCAGAGTCCAGCTGCTACGTATACAGCTCGCCGGCTCGTCTTGCACATGAGCTAGGGGTGCGTGCGTGTTGCGTGCGTGAGCTTTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0222000.1 | 3 | 21282075 | T | G |
| Osa03LNT0222000.1 | 3 | 21275737 | A | G |
| Osa03LNT0222000.1 | 3 | 21276292 | C | G |
| Osa03LNT0222000.1 | 3 | 21277020 | A | T |
| Osa03LNT0222000.1 | 3 | 21277083 | A | G |
| Osa03LNT0222000.1 | 3 | 21277095 | T | A |
| Osa03LNT0222000.1 | 3 | 21277921 | C | T |
| Osa03LNT0222000.1 | 3 | 21277936 | T | C |
| Osa03LNT0222000.1 | 3 | 21277964 | T | C |
| Osa03LNT0222000.1 | 3 | 21277998 | T | C |
| Osa03LNT0222000.1 | 3 | 21281127 | G | T |
| Osa03LNT0222000.1 | 3 | 21281370 | T | G |
| Osa03LNT0222000.1 | 3 | 21281426 | T | C |
| Osa03LNT0222000.1 | 3 | 21281484 | T | C |
| Osa03LNT0222000.1 | 3 | 21281932 | A | G |
| Osa03LNT0222000.1 | 3 | 21275523 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0222000.1 | osa-miR3980a-5p | Translation | 5.0 | 19.069 | 1 | 21 |
| Osa03LNT0222000.1 | osa-miR3980b-5p | Translation | 5.0 | 19.069 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0222000.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0222000.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0222000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0222000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0222000.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0222000.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0222000.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0222000.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0222000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0222000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0222000.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0222000.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0222000.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0222000.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0222000.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)