© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0020200.1
CATTAGGAATTCAGTTAGAACTTGAATTGCTGTAGGATACTTATTCTGCTGTAGGGTATAAAAAGGGCCAGTTAAATGTATGATATTACATTCGTGATGCCACTCTCCATAACCAGAACTAGCATTGGTCCAAAACAAGATCCCTATGCACGGAAATTGAATGGCCTAGCTATTTACAAACGCTTACATCAAATTAACAGGCCTTCCAACGTAGCAAATAAATAAGCTCAGCGGCATGTATTTGTCAGAAAAAGGTCAAAAGTGAACAACTTCCCCAAACGGAATCAAGCTTCACAGTTCACGGAGATCCACCATATCAAATTTCACGTTTGGGTTCATGTACACATGGGAGCAATGCTCATAGATAGAGGTACCGTCGAGAGGCTCCTCATGAGGATGAAATCCACTCTCTTGACAATCATGTATCACACCCATACCACCTGGATCCGTCAGATGAAATATACCATGCTTTCTTGTTGTATCAGTAGGTGCCATAACTATTGCAATTGCTTCAGGAAGCATGACCTGGTATGAATAGTGATTATGAAGATCAATGGAAGATAGGAAGCAGGTCTGTGTTGGATGTGTATGAATCCAACCAAGAGTGAAAAGTGAGCCTTTGTCCTGAACTTCAAATATTTCTTCTTCATTTGTAGCTTGACATGAATCAGATGTTGATCTCTGCTTAGGAATTATCAGTGTTGTCACATAAAAAGTTCTCTTTTTCAGAGTACCAGCAAGAATACCACATGTTTCCAGATTATTTGCAGTGTTTGCCTCAGCAACCCTCAGAAAACACTCCATTAATGTCACCGGCACATGCAAATTCTGATAGCGTCCAGTGCTAGAACTAGCAATTCCTGGCCCCAGATCAGCAACTGTTGATGTAGAAATTGCCCTATGCTGTGGATGTACTTGTGCCATGACAGGTGGGGGAGAAGGTTGCCTGATATTCAACTGGGAAAATTCTTCTTCAAAACCAGGAGACACAGAGGTTGCCTCCTCTACTGGTAAAGACAATTGGCCATCGTCTAGGGACAAAACAGATTGCATATCCTCATTTTTATTTGTTGGAAAATCTTGTGATCTACTAGGACCATATAAGAGGTCTTGGTTCAAGATTGATGGTACTAAACTAGAGACATCACTTTTGGTTAGTTCAGCATTACTTGGATATTGGATCCTGATACCAGTAACAGGTGCCGTCCATTTGCCATGAAGCCCATTAGGCCCCAGTACCGAATGTCTGGATAGAGTTTCTTCTTTAGGATAAGGCAGATTGCCATATCTGCGTAATTTACACATCAAGTAAATAACATTGTCGATTTGACAAGCTGACTATCAGGTCTGCCACTTTGTGTTGGTTCCACTTGATGCTTCCCTCCAGAGAATGGCATCTTCAATAATCCTGTAGGGCTTCCAACCAATGGCTGTGTGAAACATGAACTTTGGGTAAGATGATCCATCTGACTAATTGCAGCAGAGGTTCCACTTTGACTATTAGGTTCTTGTGTGACCCCTCTATTAAGGTCAGCAATTTGCCGTAGCACAACTGGCTTCAGAGTCTCAAGCTCATTAACAACATTCAAGAGTTTATCAGAATTGTGTGGGCCTTTCTTCAAGAATTCCTTTTCTCGTAGCTTGAATGCATGATAATCACGATGTTTTGGGATAGTCTCACACAGCAAACTCGAGTATCTCAGAAGGATGATGTAAAGGTCTACGAGATTCTTCTCCTCCCTATATATGTTGGCCTGGCGGAGGAGGTTGTCGGCGATGCGGAAATAGTAGGCGATGCTGATGCGGTGGTCGACGGAGACTGGGCGTGCCATCGCCTCGATGTTGATTTCTCCCATAGCTTGGCGAGATGATGGCATGGACATCTTCGTGGTGCCTAATATCCGCCCAGCTTTTACAGCGATGTCCAGGCCAATCCAGTAGAGGCACAGAGGCGAAGATCTGGTGGAGGGCGCGGGACCACTCCGGCAGAGCGGGGGTTGAGACGGGAAGCCGCACAGAGGCGAAGGGGCAAGGCCACGCAGGCTACGAAGAGAGAACGGCAGCCAGGCAGGCAGGTGGGGCGTGGGCAGAACGACGCGGCGCGGAGGCGATAAACCGAGGGAAAGGGTGTGGAGCGGCAGCGAGGCCCGCGGGAGAAAGTGCAGCAGTCGCCGGTCTTCGATTAGCACGGCGAATAGGAGGAGAGAGGCGCCGGGCGCGACCAGGAGAGAGAGGAGATCGAGGTGCCGCCGTCCCGACGCGACCTGCGACTGCGAGAGGAGGAACGAGCAAGATGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0020200.1 | 1 | 17215860 | A | C |
| Osa01LNT0020200.1 | 1 | 17212090 | C | T |
| Osa01LNT0020200.1 | 1 | 17212015 | T | C |
| Osa01LNT0020200.1 | 1 | 17214828 | T | A |
| Osa01LNT0020200.1 | 1 | 17214762 | C | T |
| Osa01LNT0020200.1 | 1 | 17211314 | T | C |
| Osa01LNT0020200.1 | 1 | 17217107 | C | A |
| Osa01LNT0020200.1 | 1 | 17211752 | A | G |
| Osa01LNT0020200.1 | 1 | 17213964 | G | A |
| Osa01LNT0020200.1 | 1 | 17214714 | A | G |
| Osa01LNT0020200.1 | 1 | 17210292 | A | G |
| Osa01LNT0020200.1 | 1 | 17210620 | T | G |
| Osa01LNT0020200.1 | 1 | 17210939 | C | G |
| Osa01LNT0020200.1 | 1 | 17211063 | T | G |
| Osa01LNT0020200.1 | 1 | 17211135 | C | A |
| Osa01LNT0020200.1 | 1 | 17211231 | A | C |
| Osa01LNT0020200.1 | 1 | 17214474 | A | G |
| Osa01LNT0020200.1 | 1 | 17214557 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0020200.1 | osa-miR1861o | Cleavage | 4.0 | 19.074 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861o | Translation | 5.0 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR156b-3p | Cleavage | 5.0 | 20.729 | 1 | 21 |
| Osa01LNT0020200.1 | osa-miR1850.2 | Translation | 5.0 | 16.386 | 1 | 21 |
| Osa01LNT0020200.1 | osa-miR1861a | Cleavage | 4.0 | 19.074 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861a | Translation | 5.0 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861b | Translation | 3.5 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861c | Translation | 3.5 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861f | Translation | 3.5 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861i | Translation | 3.5 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR1861l | Translation | 3.5 | 22.769 | 1 | 22 |
| Osa01LNT0020200.1 | osa-miR2873b | Cleavage | 4.5 | 15.159 | 1 | 21 |
| Osa01LNT0020200.1 | osa-miR156l-5p | Cleavage | 4.5 | 14.099 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0020200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0020200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0020200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0020200.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0020200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0020200.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)