© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0020300.1
GCACAGAAAATGAAAATAGATGATGGAATAGGATCGTTTCAATTTACAGGCAGATCAAATCATTAATTCTCACGAGCTCTACGATGCACTTCAAAAAAGAAAAGGAAAACAGCACATCAAAACGATACCAGTGAACAGCTACAACCAGTATTTTCCCCTACAGCTGATGAACTCGAGAATCAACATAACTAACATTTTGGGAGCACAGCATCAGCCTTGCACTTCATCTTTGGGCAGTACAGCAGATTTTCTCAAATTGCTGTACATTTCATAGCAGAAGCCAGCAAAATCAGTCATGTTTCTGAAGAGCTCTGGCAGGTGCATCCGAAGGTTGGCAAGTGATTTCTCCCTAACCTGCCTGGCAATCCTATTGTGATGCCCCATTTCTTCCCTCAGCCTAATCTCTACTTCCTCGATGGCCGTCTTCCTGTCGGCGACAGGATCTGAGTTCACAGCTTCAGCCACTTCACTGTTATTAGCATCCTCGCCTTGTGATGCCTTTCTCTCCATGTACCTTTGGTGCCATTCTTCAAACTGTGCTTTTTTTCGGTTGAGATCCCTGCGAGTTTCCTCACACCTCCTCCTTAGATTGACTTCTTCTTCCTGAAGTAGTACAATATTGCTTATGACTTCAGCAAAACTTTTGATGGCAGTTTTTGCAAGTTCAATTGGAAGCCTTTCAAGCTGGTCATGCCAGGCATATAGCAGATCTTTTATAGGTGGTTCCACCAGCCTAGGCGGGGACGAAACTTTCTCCTTCAAGTTGCTTTCGATGGGGATGAGGTTAAGCTTGAGCCATGCATTTAGTGCTCTAATGTACCCTTTCTGATGGTCCATGAGTTTCTCAAACTGCATGTGCCACTCCCTGACAATGTCACGCAGGTCACAAGTCTGCTTGTAATGCTGATCAGTTGTCTCTCTTGGAACCGGTGGAGCCTCAAAATTTCTTATTCCTGATATGATAACCAACTGCCACTTATGATGATGATGCATAGAACTCCACATGTTTGCCATTCCATCAACAAGGTCCACTAACTTCGGGTATAACTGTTTATCACGTAGTCGGTTTATTTCTGAGACGGTTGAATCCATGGATTGCATATCCACTATGTACCTTGTGTGCAAGTGGCTAACAGCAGCCTTAGTCTTCTCAAGGGTTTCGAGTTTCACACCACGTTTCTTTTGTTTATGAAGTAGGGCTACCTTCTTCTGATAATCAATTTTCATAAGTTCCCCTGCCTGGTTTGGCATATTCAAACAATAAATTAGTATACAGAAAACAGTAGCTAAGTACTCATGGAACAGAAACAATAACAAATATCACAAATGAATTAAGAACCACAGGTCTAGAATCTAGTAAATAGGATAGTTTGGTCCAAATTTGTTAATCTTATGAACTCACAACTACAATTACCAATCCTTCTACCTGCACATAATTGATTTTCTCACTGTACATGTGCTCTCTGCAATTGCAATGAAAGTTCCATCTATATATCAAGGGATATAACATCAAATACCCAAACTCCAACTTTCATGTGATCAAACGTGTACCAGATGGTTGTGGATGCAGGTGCCTTACCATACATACATATCCAAAATTTTCTACATCGGTGAAATGAAATTGAGTAGATACATTGTGAGATATAATTTAATAATATTTAACTCTTCTAGTTTGTAGAACTTATTATTACAGAAATTATAAGTCAATGTGGACGTAGCCGCGTAGGGGACCATGACATCCAATCAACCAATAGCTGGAATTGGAGGGTTTCTTTGAAATGATAGTACCTTTGGGAAAAGAGCAATATGTAACTGTTGATCACTTGATTGCAATTTGCATACTGTGGGGTACACGGTACCCGGGTACCCACGGCATGGCTTTTGCACCGAATGCTATATAGGCCCATGTGGCTTGTAACCCAAGAAGGAGAGATTCCCGGGATAAGATATAAATGCTGAGGATCATGCATATCTTTTTTAGATAGAATAGGAAGATTAAGTTGCAACCAACTAGATACTTTCCTTGTAACCCTCCCCCTCATCTTATATAAGACAGGGCAGGGGTCCCGAGATGCGGGTGACTCCTAGCAACTCTCCACGACCTAGAAACCCTGATCATACCTTACATCATACGTGCCCACGAGCTATTCCAACGCCATGCTGCACACATCTACACAGATCCAATCTACATACAACTGGACTAGGGTGTTACCTCACATTGAGGGCCCGAACCAGTATAAATCATCTGTGTCACCATCTCTCCTTGGTCTAGTGCACATTATTAAATGTATTGCCGATCATACGAATCGACACATAGCACTCCTTGATTGATAATATAACAGTGAATTTTAGTAAATCATATGTTTTATGGTCGAAGTTGCATAAAACCCCAAGTATTATGACTTGTGGCATTAACCCAGGTTTTATGCAACTCCAACAAGTAAAAAGCATGGGGTTTCCTTAAATTTACTCATAATTAACTCGATTTCTTAGCATTTTGGAAACTAGTGACATCTTTGCAACAATTGACAGAACAGTACATTACATCAATTTAAAACTCTGATGAACAGTGGGATTGCACACAGAATAGCTTGTAGTTCAAAATTAAGTTAGGATTGGGAATTCGACTTACATAGGTGTTAAATCAACATGGACTAGCAAATTCTAAATTTCTAACGGTTAAACAAGGAAATAGTAGGCCCACAAGATTAAGAGGTCGGAAGTATATTGCCTTAGGTTTTGACATGCACAAACAAAGAGAGGACACAAATTACAAAGCAACGCAGATACAGTTTCAGACATAGTTCCAGATTTCGCAAATGTAAAAAATTTTAGTCAAATATTCATTACCTTCACTTCATCATACAATTTCTTCTCCCATGCAAGCATCCTATCAAGTACTGTGGCATGAGTTTCAAACCTTTCATCAATTTCAAAATTATCACCAAAATCATCTTGGTTAGGTAGGTTCTTGAAGGAGCGGTTCCAAGTAATAACATGCATGATTTTTGTGGAGTGGTCAATGTGCCCTCGACTGTCGGCGTGGTTGGAGTGGTAATGCATTCGGGTGGCCTCAAGCTTCTTTGACACGTCATGTGCACTCTCTGAAGCCTTGAGGAAAGAATCATCAAGCTGAGCAACAATTTGCAGCAAACTGGCAGTACCTGACATCGTCTTCCCCTTCCGAGTTTCAACCGCACCCATAGATGAGGCATGCTGGTAGCGAACTTCTGCTGGAGGGCCAGGTGCCGCTTTGGGCGGCTTTCTAATAAGTGGCTTCGATGGAGGAAGGTTTGCCGCAAGCTGTTCAATGGCCTTTTCCTTCTCCAGTGCTGTCTGTGGTGGTTGCTCCTCCGCAACATGCATAGGAGCAGCTGATCCATCAACAGCTGGTTTCATAATCGGTGCCTTCATCTCCGGCACTGACTCCTTCTCCCGCTTATCCATCCAAGACTCCTCAGGAGGTTGCTCCAGGGTGGGCGGCGGTGTGGTGGTTGGACCGAAGAAGTAATCCCAGGTAGTAGCCATCTGAGGCTCAGGCATTGGGGGTGGTGGTGTTGTCCTGGTGGCTGGCGGGGATGGGTTCGGCCGTGGTGGGGGTGGCGGCGTTACTGGAGAAGACCCCACGCTGCCCATCATAACCCGCTTCTGCGGCTGTCCGTGTACCATTTCTTCCACGAGGACATCATCGTGCTCATGGTGGTCATCATCGCTATCGTCGTCTTCGTCGTCGTCATCATCATCTTCGCTTTCTGTTCTGATATGGCCGTCAGCATCATCCTCCACCTCGTCCTCTTCCCGGATGGATGCGCCAGCGGCGAGTTGGGTCTTGGTGGCGGCCTTAGGGTCGGGCATCGGGATGTTTGGAGTAGAAGAGGAGCGCTGGAGTGTGGCGTGGGAGAAGTCGAGGAAGGGCGGGGGCGGCGGGGAGGGCGCGATGAGCACGGCGGCGGTGGACGGGGGAGGAGGCGCGGAGACGGAAGCGGCCGCCTGGGTGGGGGCGGCGAGGTGGGCGTGAGAGGCCACCAGGTCGGGCGTCTCGCCTTGGGCGAAGTCAGAGAGCGCGCCGCCGGTGCTTTTGAGGAGAACGGTGTAGGCGGAGTGGGCGGCGGCGAAGGCGTTGCGCGCCTGGACGGCGTCGGCCATCAGCTTCCTCCGGTCCCGGCACCGGCACACCGCCTCCTCCTGGTCGATCTTGGACTGCCCGCACCCCATCCAAGCGGCGATTGAGAGGAATTCTTGCGATCCTTCCCTAGAGGGTTGTGGGGATTCTTTGAAGGGGTTCTTGGTGGACCAGATGCGGCGCCGGCGCGGCCGGATTGGAGAGGAATGGGTGAGAAGCGGCGGGGGAGACGGCGGCGGTGGATGTGGATGAACGACTGCCTGCCTGCCTGCCTGCCTGCCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0020300.1 | 1 | 17271215 | C | T |
| Osa01LNT0020300.1 | 1 | 17271526 | A | C |
| Osa01LNT0020300.1 | 1 | 17272120 | T | C |
| Osa01LNT0020300.1 | 1 | 17272413 | T | A |
| Osa01LNT0020300.1 | 1 | 17272455 | G | A |
| Osa01LNT0020300.1 | 1 | 17272581 | T | C |
| Osa01LNT0020300.1 | 1 | 17272778 | A | T |
| Osa01LNT0020300.1 | 1 | 17270503 | G | A |
| Osa01LNT0020300.1 | 1 | 17274775 | C | T |
| Osa01LNT0020300.1 | 1 | 17267449 | G | A |
| Osa01LNT0020300.1 | 1 | 17267682 | G | A |
| Osa01LNT0020300.1 | 1 | 17267699 | C | T |
| Osa01LNT0020300.1 | 1 | 17267802 | A | G |
| Osa01LNT0020300.1 | 1 | 17267930 | A | G |
| Osa01LNT0020300.1 | 1 | 17268209 | A | G |
| Osa01LNT0020300.1 | 1 | 17268444 | G | A |
| Osa01LNT0020300.1 | 1 | 17269156 | C | T |
| Osa01LNT0020300.1 | 1 | 17270354 | A | C |
| Osa01LNT0020300.1 | 1 | 17270535 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0020300.1 | osa-miR5528 | Translation | 4.0 | 15.459 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR5818 | Cleavage | 5.0 | 11.436 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR5825 | Cleavage | 4.5 | 20.223 | 1 | 24 |
| Osa01LNT0020300.1 | osa-miR5827 | Cleavage | 5.0 | 15.246 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR5827 | Cleavage | 5.0 | 24.96 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR7693-5p | Cleavage | 3.5 | 17.237 | 1 | 24 |
| Osa01LNT0020300.1 | osa-miR7693-3p | Cleavage | 4.5 | 13.199 | 1 | 22 |
| Osa01LNT0020300.1 | osa-miR159c | Translation | 5.0 | 10.259 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR159d | Translation | 5.0 | 10.259 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR159e | Translation | 5.0 | 10.259 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR1858a | Cleavage | 4.0 | 22.285 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR1858b | Cleavage | 4.0 | 22.285 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR1866-5p | Cleavage | 5.0 | 10.573 | 1 | 24 |
| Osa01LNT0020300.1 | osa-miR1876 | Cleavage | 4.0 | 19.055 | 1 | 24 |
| Osa01LNT0020300.1 | osa-miR5152-5p | Translation | 5.0 | 15.121 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR5337a | Cleavage | 5.0 | 21.429 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR5519 | Translation | 5.0 | 17.617 | 1 | 21 |
| Osa01LNT0020300.1 | osa-miR5522 | Translation | 4.0 | 15.525 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0020300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020300.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0020300.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0020300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0020300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0020300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0020300.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)