© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0223700.1
TATATATATATATATATATATAGTATTTATTATCAACTAATGGATATCCAACAAACAAGGAGGGGTGTACATATTTCTCCGAGTACAAAATGGCGGTCTGTATTGTAAATACATAATCAAAGTTTATATCATGTTTTGACACTGTAATAGCCATCAATGCTTCTTCGAGCTCAAAACTCGCTCGCTAATAGTCCTAATAAACTTGTTAATTTCTCTAAAGTGTAAAACTATATTGTGTCCAGGAATTTCCATAGATGTACTTGTACCAAGAGATAATCTTTGGATCATTCCTATTATATGTCCCGTCGATGACAATACAACATCAGATCTACCTACTGTATGCAAGTTTACCACCTGAAAGTGTTCCGTATCATCAACGATCCTTCTACAGTGACATACCTCTCCAATTGCATAAGAGTAGCTGCCTGAAAGTTCATGAAGAATACTGTATATTTCTTGACCATTAGTAATCTGCGTAGAATCATCTGCTACGTTTGCATAATCATATCCTTCTTTCTTGTTATCAGTTGGTGTAAGAAGCACGAATAACTTGCTACACTTTATCTTCAACCGCTGAAAAGTACCGTCGCTGACTTCTCGACCCAAAATGATACTGTTAGTATTTGGAACACTACTTGATGTGGTTAGAATATGGCCCACATTATTTATAAAAACTCCCGCGGCAAAATTTAAATGTTTTCCACTTCCAATCTTAAGTAGCCAAATACAAGACTTTTCAGAGAATCATAAAATTGTGCTTGTTCTTCTGTTGTTAGATCACGCCCTTTTCCAATATGTGTAAAGGCTTTAAGTGGCATTTTAATATCTCTGAAAATATACATTTGAAACTCAGAATTCATTAAAAACAACAATATTTTTAGTATAACAAATGCATCAATCCCATCTTAAAATACGAGAGCATTCAAGACACAAAAATGCTACAACCTAGAAATTTGTACATTACATGCGCTGCAAGCAAAGTGATATTTGTCTTATTATGAGTTTAATTGTTTAAACATGAGGTTATTCCCAAACTACATGAAAATGCAAGAGCAACAATAGCAAATGATAATTTCCGGCACAATGCAACAACTTACCTATACCAAATGGAACCTCTTGGACATTAGATGGAGAATAGGTCTTGGTTACCGACAATTAACACCAAGTAGATATAAATTACCAAAAGAATAACAGCTTTGGAGCAACACTTCAGAAGAAACACAACGTAAAGAAATTGATTCTTGTTTTTACCAGGAAGATAGATATATTGCTGCAACATGTACCAAATGCAACAGGTAGAATCAAGAAAGGATTGCAATTGTTACTTCCAACTAAGACAACAGAACAAAGCACTGCATGCAATCTTAGTGTGCAACTGAAAATACTACTATCTACTAGAATTAAATACGGACCAAAAGCTCATGCAACACCATTAACCCAAGGTTCAAAACTGTCAAGAAGTGCGTCTTGACTCGTGAAGCATGAAAAGCTGTGTCTCACTAATAATCGCGCCACCACCTAGCCACAAGAACAAAGAATCCCAAGTATTTACTTCCTGCAGATGTGACACGACAATCTACAGTTCAATAAAAATTGGACACAATGAACTTGCTGTTTTAGGAGTACAACGTTGGGAAAAATATCTAACAAGGGACATCAACACTGACCAAACAACAATTCACCACACAGGAATAACCAACATCAGCAAGGCTTCATCACCATGAAGTGGTATGAGTGACAGCACCTCCACAGGTCAGTGCCCACCTAAACGAATCCCACCTATATGAATCCAACAGTAGGAACATCAGAAATGCCACGCCACTAGAGCAGTAGTTCTTGTCCATATCATCCTAGGAACTTGCACCAATGTGTGGCAACAAGCTTGAGGAGCTAGCAGAGCCATATTGTTAGGGACCATGGTCACTTGCGATGACAATCATACGCCACACTCTGATGCCACTGGATTGGAAAGGGACAAGTGTTCTGCCAGAGCTTCGTTGCTGGATGCTTGCGCTTATGTGAAAATGCAAATTGGGTAGATGTGGCCGAGAGGAATAGGAAGGATCAAAAGATAGGAGGAGCACAAGCATCCAACCTTGGTGGACGGCACCATTTACTTTCAGGAGATGAGGTCAAATGGGCCGGACCAATGACTCCCATGATTTGTGCAAGGCTGCAACACAATCCACAACAAATGTTTGGCACCATCAAAATGACGTGTGTCCCTACCTCATATGTTCCAATACACTTGTGGGATACGAAGAAGCCAATAATCGAATATTTCAGTTAATAGTTTAGTTATATTATTTGAACAGTATATAACCTAGGGATGCACTGTTTGTCCATCCACATCAGTAAGCATGAAACATAGCGTGCAATAGACAGAAGAAGCCACAGAAGGTCTATAGATACCAATGTGCACTGCACAATTGCCTGGCTTGATTCACCTGACATTTGTGCATGGTTCACAGGGCTGCACGCACGAGTAAAATCAGGACTGGATACGCGAACATGGACTGATGTAGTTAGCACTCACATGCCAAATTGTTCACTAATGCTGGAACATATACCAACAAGCGCAATACAGCGATTTTGCATGTGAGGCTGTGTATGGTAACCAGTGTACCACCAAAATAGTAAGCACGTAATCCTGTATGTAAACTCTCCAGACTGTCATATCCTACTTGTTTATAATCTACAAGCCATCATGAACAAATGCTTCCAATTTATGAAAATTAACAATCTAAAAATCACAACACTGCAATTATTGTCTATCGATTCAATACTAAACGGGTATGCACTAATCAAATGACAACCATCCTACTATCCAAATGACAACCATCCTAAACAAGAGAGGGAGATTGCACAAAAATCACAGACCAGGCATACAGCAAACAAATCAATAGGAAAGGACGAGGACTCACCAATTCCTCAGGCCTATAGAATCAAATCGAGGACTCCCTGTCCCTGGAGGACCGGCTTGCGCGGGCGCCCGTCATCTCGGTGGCCATGCCGCATGGAGCTGAGACGAGGAGGCTGCCTACCGCCGCAGACCGGACCGGCCTCACGAAGTGGCTCCGCCAAGAACCGTCCGAATCGCCTCCCGTCGACCTCCTCCTCTCCCTCGCCTGCCGATGCCGCCGCCGTGGTGCCGCGGGTAGGGTTCCGCTAGAACTAGTGCCGAGGGCGACGCGGCGATCTCGATGCGGCCGGCCCACTGGCCCAGATTATTTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0223700.1 | 3 | 22874950 | C | G |
| Osa03LNT0223700.1 | 3 | 22875117 | A | T |
| Osa03LNT0223700.1 | 3 | 22875496 | A | T |
| Osa03LNT0223700.1 | 3 | 22875792 | T | C |
| Osa03LNT0223700.1 | 3 | 22875832 | T | G |
| Osa03LNT0223700.1 | 3 | 22876826 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0223700.1 | osa-miR5541 | Cleavage | 5.0 | 17.671 | 1 | 21 |
| Osa03LNT0223700.1 | osa-miR5541 | Cleavage | 5.0 | 9.043 | 1 | 21 |
| Osa03LNT0223700.1 | osa-miR5512b | Cleavage | 3.5 | 11.729 | 1 | 21 |
| Osa03LNT0223700.1 | osa-miR810b.2 | Translation | 5.0 | 11.077 | 1 | 21 |
| Osa03LNT0223700.1 | osa-miR1438 | Cleavage | 4.0 | 15.649 | 1 | 22 |
| Osa03LNT0223700.1 | osa-miR2105 | Translation | 4.0 | 17.21 | 1 | 20 |
| Osa03LNT0223700.1 | osa-miR2105 | Translation | 5.0 | 9.542 | 1 | 20 |
| Osa03LNT0223700.1 | osa-miR2122 | Translation | 5.0 | 16.276 | 1 | 22 |
| Osa03LNT0223700.1 | osa-miR2863a | Cleavage | 3.0 | 20.521 | 1 | 21 |
| Osa03LNT0223700.1 | osa-miR2863a | Cleavage | 5.0 | 10.356 | 1 | 21 |
| Osa03LNT0223700.1 | osa-miR5512a | Cleavage | 3.5 | 11.729 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0223700.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0223700.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0223700.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0223700.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0223700.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0223700.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0223700.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0223700.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0223700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0223700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0223700.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0223700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0223700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0223700.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)