© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0224200.1
ACTCAACTAGAGCAAATAACTCATATCCGTAGAGCAAATAACTCATATTCCTAGAGTTTATCATTGGTGTAAGCTTCAATAGGTTAGTGCGCTTGGCGAATTCACAGGCCCTATCTTGTGGTATGAACTGGGTACGCGATGATTTGCACTGCGTATTGGGGGCTTACCATAAGATAATGCCATGAATTTGTCAAGCGTTCAAACCCACTGAAATGTTGTGTGAAGGTAAATATTTCAAAGTGTTCATGAAGAAAAGGCAGGTGAATGTCGCTCGCGGACAGACCTACGGACCACCTCAACACCGCTGAGATCAACGTGGCCGTAGTTTTGGGTCGCTGAGTTACTGGTGGCGATTCATCAAGCTGTGACGGTCCTATCTCGTGTTGTGCTGTTGACGACCCCCCACCGTAGCTATATGGTTCTCCGTAGGACTATGTGCTGCCAGCATATCCCATCATTTGTTCAGGGTTGTACATTCCTACAAAACATTGAATGCAAAGTTGTAGCGTACACACATAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0224200.1 | 3 | 23076798 | C | T |
| Osa03LNT0224200.1 | 3 | 23076822 | T | A |
| Osa03LNT0224200.1 | 3 | 23077066 | A | G |
| Osa03LNT0224200.1 | 3 | 23077374 | C | T |
| Osa03LNT0224200.1 | 3 | 23077778 | G | C |
| Osa03LNT0224200.1 | 3 | 23077908 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0224200.1 | osa-miR1428e-5p | Translation | 5.0 | 19.204 | 1 | 22 |
| Osa03LNT0224200.1 | osa-miR1428f-5p | Translation | 5.0 | 19.204 | 1 | 22 |
| Osa03LNT0224200.1 | osa-miR1428g-5p | Translation | 5.0 | 19.204 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0224200.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0224200.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0224200.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0224200.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0224200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0224200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0224200.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0224200.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0224200.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0224200.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0224200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0224200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0224200.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0224200.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa03LNT0224200.1 | osa-MIR1428a | 89.167 | 120 | 1 | 120 | 5.11e-37 | 150 |
| Osa03LNT0224200.1 | osa-MIR1428b | 87.903 | 124 | 1 | 124 | 6.87e-36 | 147 |
| Osa03LNT0224200.1 | osa-MIR1428c | 87.857 | 140 | 1 | 140 | 2.23e-41 | 165 |
| Osa03LNT0224200.1 | osa-MIR1428d | 88.71 | 124 | 1 | 124 | 1.48e-37 | 152 |
| Osa03LNT0224200.1 | osa-MIR1428e | 100.0 | 110 | 1 | 110 | 3.47e-53 | 204 |
| Osa03LNT0224200.1 | osa-MIR1428f | 89.815 | 108 | 2 | 109 | 9.83e-34 | 139 |
| Osa03LNT0224200.1 | osa-MIR1428g | 88.182 | 110 | 1 | 108 | 2.13e-30 | 128 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)