© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0224700.1
CTTGATAAACCAAACCAACAGATGGAAACCGATATGGGTAGTCAGGGAATAACAGTACACACTACCTGCAAAAAGGAACTTGAAAATGCAGCACAATTAGATGGTGTGCAAGATTAAAAACCAAGCATGCTGTTAGTGCGGTTACAAGGGCCAACCACTTCTAATTACAGGAGGCAAACAGACTCGCATAGAAGCCATCGCCTTTGATCCCATCTCCTCTACCACTTCCTCTCCTGGCTCCATGATTGGGTACTGGACCTCCTCTCCCACATCGATCGCCGGCACCGGATGCACCTTCGCCGCCCAGGTGACAGGACGCAACGGCAACAACGAGAAGAGCCACGGCAGAGATCGGCAAGGACGCGTTGATTGCAGGTTTGGTGCCTCCTCTTGCGTTGTTATGCGTAGATCTGATGCCCCCTGCTGCTTCCTTGCATATACCTTAGCATTTGGGTCGCCGCGAATGGGGTCGCAGCTGTAACACACAAGGGTTCATAGCGCCTGCCCAATGGCAATCTTGTTTGGTTCAGAGAAGTTGTTGCCGGCGGGCGGCGGCGATGAGCAGCAACAAGTAGTATTTGCATAACCAGCATCTACGAGATAAAATTTACCACCAGGAACTTGAAAACCATGATTAAGTGCATTATGTAAAACTCTTGCATCTGAAGCTGATCCCTCCCATCCAGGATGTATATGCACAAACTTCAAATCAAAATCACAAGCAACCATACAATTCTGAGAGATTGTTTGCTTCCTATTTCTATATGACTCTTGCTCATCCAATGGAAGTTTCATAGGGATATGAGTACCATCTATAGCACCAATACAATTCTGAAAAAAGGGGTAAAATTGTGGTTTCCTCAAGATTGGATGTGGGTGTAGGGATGGTGCACGAATGTAGACAGATGTGAGATTTGTGATTGCTTCCTGCACTGCTTTGAAATATCTATGTATTGTGTCTGGACTATGCTGAAACCAATCTTGAAGTGTTTCATTGGTTGCATTTTTTGCCACTGTATATAAGAATATAGCAATATGCTCTTCTACTGAAACATATAGTACCAGTTAGGTACTCTTTCTCACGTAACTTATTGACTAGTGCATGAAAAATGTCGACCTCCATACGGAAGTTTCTTTTGCATAATCTTTCATGTCCTGTTAAAATCTCATGTACACGGCAACCCCCTGTAAGTTTTGACGTGTGCATTGGTCTCCTAATACAAGATGATTGTGATGAATCTCCTAAAGTAGGCAGAACAAAATGAATGAACTCATCATCACTTTCTGATATACGTCGGTAGCTTGGATTCATGGTGTGCAGATGTTACCAAACTGATGCTTGTTGTTACACGAGCAAGTAACGTCCAGCTATGGTGGCTAGACGATGAGTAAAGCTTCTGGAAAAATTATGCAGATAGTGAAGAGAAGAGCAAAGGATCAGCAAGCTTCTTCCACAGTTGATGAGCAAATAGAAAGAACAGGGGAAAATGGTGCACAAGGCTAACGAGGGCTATTTATGCACTTCAAAGCTAACGGCTAGTTGAGGGCCGATGTCAGTTGATGCAAACTTAAAAAAATATATTTCAAACGGCAGATTTCCTACACTTCTCCTGCGGTATATCCGAATGCACACTTTTTTTAAATTCCTGACGTTTAGCTTCCCATAGGATTGGACTCCACAGCTATCCCTATTCCTTCATTTTTCCTAATCCTATGAGTGAAAAAAATCCTTTAAAACGAGTAAGCCCTAATTGTGTCTTGACGCCATCATTCTTTCAGTCAATTCCTTATCTTTGGGTGAATTAACTGCAAGCGGAAGTTTTTGAGGAGCCTGTGTCATGTGCTGTCAACATGTATTTGAATTCCAGAAATTCCATGGCTATCTGCAAATACAATAAATGCACTTCTATTTGTACTAGTAGTATAACAGTAATCCTGTGGCCTAACAGTATACTGGCTTCTTGTTCTTGATTGCTGAAACTAAAGAAGAATTGCCAAAGACCATCCAAAGTGCACCACTACAAGACTGACCTAGTATCATATTGACGTCTTCAAGTATGATGAGGCCATTCTAAACTACTATTTAATTCTGCTAGGATGATAATCAAATGACAGTTCATAGTTAAAATAGCAGTTGCAACCAAAAGAGGCCATTCCGAAAGGCCAAATAAGTTTAGGTAACAAAAAAATACGTAACGAAAATAATTATATATTGAATAATCCTACAAGAAACATTCAGAATTTATTTTCCACCAAAAGAAAGTGAATAAATTGATGGAAGTAGCAAACAAAGAGTGTAAGAGAGGATGTTTTGCCTCTTGCAAGAACCAAGTGTTGTCCAGTTAGCAACAAATTGTTATGCATTCTTTTTCTGTATAACACCTCATAATAAAATTTGCACCAACTGTGACATAACTAAGCCTATGATCCAGAAGCTATCAACACTGGTTTTGAATCTTATGGTGATCATTATTAGATACTGAAACTATGAAGAACTTTTTCAGGAAATTGTTTAAACTATTAGATGGTTCTTCAGGAAGCCCATGAAAAAATTGCCGGCAACAAGATATGGAACTGTAAATCCTTTTGTGTGCATATTCAATGATGAACTGCTGGAAAGTGAGAACCAACCAAACAGCCATTGGTTAAAATTGGGTAGTTATATAACAGGTAAAAAATAGTGTATCGATTTAAGTTATCAGGAGTCAGAACAGATTTGTCTAAAGTTTAGGAAGACAGCACTAAGGTCTTGCAGCTGTGGACTTTATCTACTTCAAGTCCCGAAAGGCCTTGGAATGTTGGACAGAGAGCAAATCAAATCCAAGTTCAAATATTCAACAGCATAAAAGATTTTGTTGGTCTTTCTGAATAATGATTTGAGATAATAGAATTAATAAATCTATAAACAGGTTTTACTCCGCAGAATGTCTTGCAAGGTTATCAAAGAAACTGCAAGAGGAAGAGACCACTATATGTTTATTTTGGCAGAAAGATACTTAAATATCACAACATGCATGAAAATATGTCACAATGAGAGAGGAATAAGTCTGGCTTATGAGATAGGAATAAGATTGGATTGAAGAATCAGCAACTGAGCACACATCCTAACAAATATTGATTACACTTTGTATCTTCAAATGCCATGTCTGCATTGAATCAACTAGGGACATGATTAGTCTGAACAGTTTTGACTAACATAGATTATCAAGAGAAATCAGGGAAGTTGGTTAAATCACAAGGGAACATCCAGCGTGGTTCCAAAATAACTACTCGACAAGCCATATACTTCTAATTGCTGGAGAACAAGTGGATAAGTATTGTTGGACAGATTAAATTTAAGTGTTCACATGAAGAAATCCTAACAAAATTTTTTTTTCCAATGCATGATCTTTGGTCCAGCCGAGCTTCAATGCAACTCCAAACCTTAACTTGTAGATATTAAACAACAAATCCACCACTATTGATAATAATACAGACTTCACAATACCGTTGTAACATCATGGGGCCATGAACCACAAACAAACATCTACCCTTCAATTCAACTCCACATCCACCCTTTGGCATCATCTAAAGGAGCATAGAAACACATATACCAAACAAGATAAGTTTTTCAAAAAAATATAAACCGAAGGTACGGAACTCCCACTTATGTAAAGACTAATGGGTCTGATAGCTGGCCAATTAGGTGAGACTCCTCAAAATGCCAAAACCTAAAGATAACATAGAGACAATCCAAATCAAGATAATCTATGAAACGACCAGACCTTGCATGATGACCCTACTGGATGCCCTTGCTCAATTTCCAGATTAAGCTTTGTCACATGCTCATTTTTCTAGACCCACCCTGCAATCACATGCCAACAAGAACAACAAGACACTGAATCTAGAGATAATTGACCAAACCCAGAAAGTGGTATATCACAAACCAGACAAGTCAACTTCTTAAGAAAATATCCACGTCACCATGGACAAAAGATAGAATCCTCGAACCCTCCCGTCTTTGTGGGCATTGAATTTTCAACAAGGAGTTGAAGGGAAAATGCTAGTGGTTCAGAAAATTTCAATCGGAGTTGGATTGCCCTTCCAAAATGACCGAAAATGGACCTGAAACGAGCAAAATACTATCTTCTCTGAATCTTTATTTAGGTGGAAGCTGCTTAAACATCAGAAAAATTATGTCATGGTGGGTGAGGGATAAGCCTGGCTTTAGAGAGGTCAAAGAACATCCAAATCCGTATTGATTTTGCACTGCAACTCTGAATGTCGTATCTGCAACTCCAACAAGCCAGTACTTCCAATTGCTGGACAAAAAAAGCGAATATCCATGTAAGCATCGCTTAAACTGGACTGCAAGAACTGAAAGCAAATGAGTTGATGAGTATATTGCGGCTTCATGGTCTTTTTTCCAGTTATGTGATCGTTGCTCCAGTCAAGCTTCAACCTTTAACTTGCACATATCTGAGCAGCAACAAATCCAATCAGGGTTGTCATAGCTATTGCAGCACAAACTTCGTAATATCACCATAGAATCAAAAATCCTTCTGCATCATCTAAACAAGAACAGAACTCATACCACAAAAAGAACCAACTCAGGTTGTCTTGAATCCACTCAAACTAGGGGATAATCCAACAACTACCCATCAGGGAAGACCACATAAGAAGGCCAAGCCAAACGATCCGTATTCTGAAATCGCTAAATCCAGATAACATAATCTCAAAAAATCAACCAAAACCTTGTATGCCCCTTCGTTGACATACAGAGCTCCAATTCCCAGACCGACCCTATGACTATCATGCGAACAAACAGCTCAGGCATTGAACTTATACTTAATGATTGAGGTACAGTGATAGAACACAAACCGAACAAGTCAACAGCCTCCAATCAATAACCTTGGAGAAAATTAAAGAATCTGTGACAAACAAAGAAAAGCAAAGGCACACCAAAATCATAGCTATATGTCGTAGAGAGCAATTCTGATGACCGAAACAGAAATTGAACGAGAAGGGAAAAGTTTTAGGCAGACTAGCAAAAGTATGTTCTGGTTGTAGGATTCTCCTGTAGTCCCATCTATCTTGAAGCTCCATAACTCCTATGCAATTCCATCTCTGCAGGTAAATCCGAGTATTTAAATTCTACCTTTGTGAGAATTTAAGGGTAGTGATTTAAAACTCAGAATCAGGTTGGCCTTGCAAATTTATGAACTTGACCTGCAGTGAGCAAGAGACCATTTATTCGGGAAGAAATTCAACTTTGTAAATATTTAATTTCTAAGTGATGAATTGAAGAGAAGGTGATTTAAAGATTTCACTCAGCATCAGAATGGCCTTGTAAAATTATGAACTAGACCTGCAGTAAGCAAAGAGACCATTTATTTGGGAAGAAATTCAACTTTGTAAGCATTGAACATCTACTAATGATTAAGAAGGGAAAAGGGTGGTGATTTAAGGCTTCACTCAGATAGGCCATAAAAATTATGTGGAGCCTTGCAATGACCAGGAGACTTTATTTTGGAGGAAAGCAGTCTAAGCATAAACAAAATCACTTAAAGACTGAGTGGCATAAAGTCTGGAGTTTGCAGATATTAGTATAGACCGAGGCAGATATTGCAAATTCCATCTTTGGCATAGGAGTATCTGCAAGAACTATTAATTACTGACGAAGAACATGTAAAAGAAATCAACTTGGTTATCAAAGATTAAGCAGGTAAAGGTTGTCGATCACAAAAAAGGGACTGCTAGCAGCCTGTATAATTCCAACTGATGCGGCAAATAGGACTCGCTGTGAGCTGCATATATCCAATTCCTGAAGAACAACCAACTTCCCAAATCAGACCTTCCAGACATAAATCAAATTATGCTGACAACTAAATAAAATCAAGGGGGATCAGGACCCAAAAAAACATTGAAATGATGAAATCCCCATCTAACAATCTCCCGTATAATCTATCTCCAAACCACTTAGAAATCTGCCCATCTTGCGGATCTGACCAAAGGAAATCCAGCCAGGATAGTTTCAGAACTTCCATGTCAGGATAATTTCAGAACAACCGTGCACTAATCAAAACAACCAAGAACCATAATTCATCATGAATCCAAAACAACCATGAACCTGGACAATAACAATCAAACCTCCACCAATCCGGTTCATCTCAACAGTCATCCTCCCTCCTGCATCATCTAGAGGAGCACAAACACATACCGACAACAAGCCAGATCAGCGGTCACAAATAACAACAATCAACCCAGGGTCTCGAATCACCTCGCGTGAGGAATGATAAGAACCGATGATCATCCATCCATAGATTGAAGTAACGTTAGCATATCCACTCAAATTGCCAAATCTGAAATCACCGAAACCAAGTGACTAAATCAAACGGACCGTAGACAAGAAACGTTCACCTCTTCAACCACACGACGCCACAGGAACCTCCAATCCTGGATCAAACCCGCTCCTGCAACCGAACACGCCTAGAGGAGGAAACACGGGGAAAAGGTAGAACACAGAATTCAAAACCAGAACAAGATCGGATCTAATCGGAATCAAATCACCATAGAGAGAGAAAAAAAATCAAACACGTCGCAAAGCGAACCGAACAGGAGGGGCTCCCGGAATCGAGCGTAGACGGGGCTCATCTCATCTCATCTCACCGGCGGTGATCTGCGGGAACAGAAGGCGGAAACAACAACGAGGACGATCCAAATCAACCCGACGATTCAGAAAAAAAAAGGAAAAATAAAAAACACAACTCGAGTCGAATCGAGAGAGGAGATCGGAAACGGGAAGAAGCAAAACGCGACCACACGCCCCCGGTGAGAGCACGAAGAAGAAGACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0224700.1 | 3 | 23627898 | A | G |
| Osa03LNT0224700.1 | 3 | 23627827 | T | C |
| Osa03LNT0224700.1 | 3 | 23624435 | T | A |
| Osa03LNT0224700.1 | 3 | 23624097 | A | G |
| Osa03LNT0224700.1 | 3 | 23625095 | A | G |
| Osa03LNT0224700.1 | 3 | 23625559 | T | C |
| Osa03LNT0224700.1 | 3 | 23626679 | G | A |
| Osa03LNT0224700.1 | 3 | 23626879 | T | C |
| Osa03LNT0224700.1 | 3 | 23628147 | T | C |
| Osa03LNT0224700.1 | 3 | 23629963 | A | C |
| Osa03LNT0224700.1 | 3 | 23629997 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0224700.1 | osa-miR5537 | Cleavage | 5.0 | 16.548 | 1 | 22 |
| Osa03LNT0224700.1 | osa-miR5543 | Translation | 4.5 | 17.012 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5794 | Translation | 4.5 | 14.545 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5797 | Cleavage | 4.0 | 13.607 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5797 | Translation | 4.5 | 10.38 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5820 | Translation | 5.0 | 19.029 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5827 | Translation | 3.5 | 17.251 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR6253 | Translation | 4.0 | 12.666 | 1 | 22 |
| Osa03LNT0224700.1 | osa-miR6254 | Translation | 4.5 | 19.457 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR7692-3p | Translation | 4.5 | 14.172 | 1 | 24 |
| Osa03LNT0224700.1 | osa-miR319a-3p | Translation | 5.0 | 7.805 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR171c-5p | Cleavage | 5.0 | 15.797 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR816 | Cleavage | 4.0 | 8.632 | 1 | 20 |
| Osa03LNT0224700.1 | osa-miR1429-5p | Translation | 4.5 | 13.97 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR1435 | Cleavage | 4.5 | 12.257 | 1 | 20 |
| Osa03LNT0224700.1 | osa-miR1862e | Cleavage | 4.5 | 10.109 | 1 | 24 |
| Osa03LNT0224700.1 | osa-miR2055 | Cleavage | 4.5 | 10.783 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR2090 | Translation | 5.0 | 20.856 | 1 | 22 |
| Osa03LNT0224700.1 | osa-miR2092-5p | Cleavage | 4.0 | 14.439 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR2093-5p | Cleavage | 4.5 | 12.623 | 1 | 20 |
| Osa03LNT0224700.1 | osa-miR2101-3p | Translation | 4.5 | 11.532 | 1 | 22 |
| Osa03LNT0224700.1 | osa-miR2871a-3p | Translation | 4.5 | 6.276 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR2871b | Translation | 4.5 | 6.276 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR2872 | Cleavage | 5.0 | 14.633 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR2873b | Translation | 4.0 | 14.02 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5145 | Translation | 5.0 | 10.363 | 1 | 24 |
| Osa03LNT0224700.1 | osa-miR5490 | Cleavage | 5.0 | 15.055 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5490 | Translation | 5.0 | 17.269 | 1 | 21 |
| Osa03LNT0224700.1 | osa-miR5515 | Cleavage | 5.0 | 11.214 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0224700.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0224700.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0224700.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0224700.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0224700.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0224700.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0224700.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0224700.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0224700.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0224700.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0224700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0224700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)