© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0225000.1
CAGCAAACAAAGGAACTCAGACCTGATTTTATTTTTCCATCCGTAGCTCAAGTGGAGATATAACAAGTACTAAAAGCTTAGCCTTGCAGCTCACACAGCCATAAAAGGACAGCAGCAAGTTTCGTAAATGGCATCACGGTAACCGGGCACATTTTATCCAAACAGGTGTTGTTACATTGAGACACATAAATTTAATTGTTTTACAGTTCTGAGCCTGATGCAACTGCTCAGCATGTATGGTTTACGGAAGCAGATCATATCCACGGCTATACAGAGGCCACACAGATAAACTTAACCAGGGAACATATATATATATACTCTAATAAGGCCTAGCAAAAGTGGATGTGTAAAATTCAATCAAATGAATTGAATATAGATAGCTACTGCACTGTGAAATGATACATGGCGCTGTACTTATATCTAGAAGTTAGCAAGGACATCTTTCATATCAGCAACCGACATGATGGGCTCATTTCCATAGATCCGCGTCACCATCTGAACGAAGCTCTCGTACTTGTCCAAAAACTCTTTCTTGCACTTGTCCCACAGTGAAGGAAACAACTCATCAGAAGTCAGTGTCTTCTGTAACCTCCTATACATGGCACCGATTGACTTGTCAATCCCAGATAAACTGGATTTGATCACCCTCCTTAGATCAGTTTTTGACAGCCCTAGCTGGAAAGGAATCTCTTCAGCAGCTATGGTGTATGTCAATTCATCGACTTTTCGAGAAAACTGAAACAGCCTCTCGAATTGAAGATAAATAAGTGAACTGATATGACGAGTGCAAGCTTGTTCATATGATTCACTGGCCTCATGGTAGAATTTTGCAAGAGTTGGCACAACATTAGCCAAGTCATAAAGACTGTTCTGGAAGGCAGCATAATTCTCTATCAATACAATGTCTGCAGTTTTGGGGTCACTATGTGCAATTTTGTCCAAAGTTGTGAACATTGTGCTGACTAGCTTTGTGTATGCTTTATCAATTAAATCTCTGGATTGCCCTTGAATATATTGCTCCATTCGTGATGCAAGGACAGCAAATCTGGGAATGTAGGCTAGTATTCCTGTCTGCCGTACATTTCTTTCATTGCGCTCGATTTGATGGCACGCTTCATCAATAAACCTGCTGAACTGTGTTGATATTCTTGACTCCAAGTCATGAAGTAGTCTGCGAACAAATCCTGCAGCATCAGCTTTCTGACCGGACAGGTATCGTTCTGTAATCCCATGCATTGAAATGCAACGCAAGGGATCAATCTTGTATGCCCAATCGACAACCGCATAGAAGTCTTCCTGGATTCCATCGAGTAGTTCTTGAAGAGCATCATTCAATGTACCCAATTCAGCAGATGTATCATCTGGTTTGAGATCATTGCCATCTGGATCCATAAGATTCAGGTCATCATCTGGGTCATTTCCCCCTGATCTACTTTTAGCATTCGGAGCACCAGCTGGAACAAGGGCAGGTACTTCAAAGCACATAAAATGTGCAAAAAAGGAACTCTCATCCACAAGAAGTGGGATAAATATTGTTAGCATCTTTGAATATGCATCAGATACTGTTGAAGTGTCAGCACTACTGCCATTCTGACCGCCACTATTAGAACCTTCAAGCCAAACAGCTGGATTTTTAGGTGCTTTCGTGCTTGCTCGAAGTTCATTGGCGAATTCACGTGCCTAAATCAAATTATGGGGAAAGATTACATGTTTAGCTGTTGGAATGGACAAGTTAAAAAAATCAATTAACAAGGACCAGATAGAGTGTGTGTACATTCATATGGTATATGTTCACAAATAGTATAGAGAATTCAAACGCGACATAGAAAACAGAACATATCACAACGAAATACATAGGCAAGATATTAGAGTGCGAAGAACTGAACATAGACTATATCAAATACCAAAGTCATTCAATGTTTTTATTCTGACCTCTCGACGAAGCAATAAATTAAGAGAATGACAGTATGCTTTCCTTAAGGGGCCTAAACAGCTCTTGTCCAGACTCTTCAAGTGCTGCAGAAGTCGGGCATAAGTTCTGCATTTGTATCTTAGGTCTGCATGATCAGGCCGCTTCAATTGCCCTCGCTGAGAAAAGTAGCTTTTGTCACTTATCATGAAGTCCACCAAGCTAGAGAAGTAGTTCCTCAAAAATTCTGATGCGCGTCGAACAAAAGTTGTCTTCAGTTTCTCCAGTTCTGCTCTTTTTTCCCTAACAGCTCGCATGTTAACATAGCATGGATCCAGATTTGGCACTTCAAGGCTGCGAATGGCCCCTGTCAACCATTCACATGCCTCAACATTTTTCAGCATTCGTGACTCTTCAAACGAACCCCCAGTTAATGATGCTGCAAACTCCTGTGGAATTCGCAAGCGATCAAGCAACTTTTCTAGTTCTTCAACGAGTCCTTTGTTATTTACGGACTGCATCTCCAAGCCATTGTTGCGTGATTCAATCGATGCAATATCTTCTCTCATATGCCTGAGCTTCATATTAAAAATGCGTAACCACTCATCCATATCATCTACGGTTGCACTAGCAGCATCCAGACCCTGCAAAACCTCATCTATTAAAGGTTCACTCTGCAGTAGTTGATAGACATTGGCTGCTTCCAAAGCAACAAGTTCCTGTTTCAATCTCTCAGAGAAAGCATCTGCTTCACCTATGCCCATGACATATGTGTCAAGAAGTGCCTCCATGTCTTCCTCTTCATCCTTTGCTTGGGACACAAGATCATTTTCAACAGTTACAGTTACTTTCCTCTCAGTTTGAGTTGTGACAGATTTTTCTTGTCCATCTTGGGTGCTCGATTGGTTGTCCAGAGTCACTTGGCCCAGAGGGCTAGCTCCACAAAATCAATTCCAACGACTTTTGGAAGATAGCTAAGTATCTCTTTGCACATGGTCAGGATAGAAAAAAGTAGGCGGTTTCTGTCATCAATGTTGCGCATTGTCCATTGTGGAGGGGCAACACTCTGACTTCTAAGGTTATCAAACCCCAATACAAACGTGCAACCACTAGGATCATTCGAAATAACCTCAACCTTTGTGAGATGTTTCAACTTGTAAAGCTTGGCTGGCTCAAGTACTGCGCCGGATGAATACTTCAATACTCGGAGAAAAGCTTTGGCTGCCTCACCTTTTGTCGATTGTTTAACGGTGAGCGCGAGGACGCGGGGCTTGGCGAGGCGGCCGAGCTTCTCGAAGATGCCCCTCCCCTTGGCGACGCGGATGGAGAAGGACACCTCCTCGCCGCGCGCCCCCGAAGCCGCCACGGCCTGCGCGCACGCGCGCCGCAGCTCGGCGTCGTCCGCGCTCGACTTCGCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0225000.1 | 3 | 23806908 | T | A |
| Osa03LNT0225000.1 | 3 | 23805810 | T | C |
| Osa03LNT0225000.1 | 3 | 23807921 | T | C |
| Osa03LNT0225000.1 | 3 | 23798446 | C | T |
| Osa03LNT0225000.1 | 3 | 23798614 | A | G |
| Osa03LNT0225000.1 | 3 | 23799009 | G | A |
| Osa03LNT0225000.1 | 3 | 23800367 | T | A |
| Osa03LNT0225000.1 | 3 | 23801725 | A | G |
| Osa03LNT0225000.1 | 3 | 23801794 | G | A |
| Osa03LNT0225000.1 | 3 | 23802577 | A | G |
| Osa03LNT0225000.1 | 3 | 23803124 | A | G |
| Osa03LNT0225000.1 | 3 | 23804050 | A | C |
| Osa03LNT0225000.1 | 3 | 23804490 | G | A |
| Osa03LNT0225000.1 | 3 | 23805285 | T | C |
| Osa03LNT0225000.1 | 3 | 23805897 | T | C |
| Osa03LNT0225000.1 | 3 | 23806753 | T | G |
| Osa03LNT0225000.1 | 3 | 23799540 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0225000.1 | osa-miR5526 | Cleavage | 3.0 | 11.105 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR5527 | Cleavage | 4.5 | 20.366 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR5532 | Translation | 4.0 | 12.828 | 1 | 22 |
| Osa03LNT0225000.1 | osa-miR5788 | Cleavage | 4.5 | 17.337 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR5820 | Cleavage | 4.5 | 24.197 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR5827 | Cleavage | 4.5 | 11.951 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR160f-3p | Translation | 3.5 | 12.091 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR171c-5p | Cleavage | 4.5 | 16.655 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR171c-5p | Translation | 5.0 | 13.465 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR166j-5p | Translation | 5.0 | 11.105 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR1852 | Cleavage | 4.0 | 19.395 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR2864.1 | Translation | 4.5 | 24.259 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR2866 | Cleavage | 4.5 | 17.243 | 1 | 20 |
| Osa03LNT0225000.1 | osa-miR812o-5p | Translation | 5.0 | 22.222 | 1 | 21 |
| Osa03LNT0225000.1 | osa-miR5494 | Translation | 5.0 | 14.316 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0225000.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0225000.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0225000.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225000.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225000.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0225000.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0225000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0225000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0225000.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0225000.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)