© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0225100.1
AAAGCTGGGCTCTCCAAAAAGAATAACGATCTAGTAACTGTTACAGCAGTCCATGAAACGGCTGGAAGACAAATTTTGCGATCCACATCCACTTTATCTAGTCATCTCATACATATAGACTCTTTATAACCAACCTAAACAGCAATAATGACTACAGGTATACAGATAATTCACAACAGCCTTTTTTCTGCTAATCTTTACACACCTTTTTGTATAATATAAATAATGAAGAAAAAGACAATCTTAATGGAATCGAATAACATCAATGAATGCATATGAATGTGACGCCAAGGGCTGGCTGCCAAGTGAGCCAACCGCATTGTGACTTGTGAGGCTATGTATGTATCAAGGAGGTTTATCTCGGATCACCTCTTCTTCCATGGGCCCAATAAAATGGCAGGAAACGGGACCCGCCTCTAGGCGAAAAATGGCTTGAGCCTTGTGTTTGTGGTGCCATTCATGGCGTGATGGCCTTTGGCCGCCCATAAGTTAGCACCATTACAAACTCCTTGGCAGGGGAGCCTATCATGGTCTGTGTTGTCTGTGTTGATCGCCCCCTCAACCACACCTCTACTAAATTGCACAGGGGTTGTGTAGGGTTCACTGGCTGCCCGCAGCAATTTATTTCGACCTCTGCCTCGTTAGGAAGGCCAAGCTTCTGCATGAGGTACTTCTGGATTGACGAGGCAGGTATGTTTCCATCTTTTATTCGCAAATAATGGGAAGGTATCTGTGGTAAAGGTGGGTCTCCTTCCTGTTCAAATGATGCAACAAGTGAAAACCATATAGAACTGAATTTCTTTTCGTTTTGTGTAGCTGCAGCTTCAGGCTTACTATCAGATTGGGCATGAAGTTCTCTCCTCCGTCCAGTCCTTTGGTTTTTCCTTTTTAGCAAAGGTACATCTTTCTTATCATCCTCTATTTTGGATTTCTGCATATATTCCCTAGACTTTGTTTTGTTAACAGATGTGCTCCCAGGAGAGTCACTAAGTTGCTCTCTCTTAACAAATGGACTCTGTGAACTTGATCGGGAGGACTTTGTCCTGTTTGCAGCTTCTACCAAACAATTTAAAGGTCTCCAGAGCTCATCAGTCTTATCGGCCAGGTCCTTGCGATCACCTTCGGTATCTTTATTGGAGGAATGGTTCGATGCCTCTGCGTTTGATGACATCTGTCTTCTTGTTTGTGGCACTTTGCCCAAATTAGTGGGCAAGCTTGAATTCTGAGCATGCTTTTCACCATTATCAATTTCCTTTTTCACAGGATCATCAATACCAGGACCAAGGCCACGCAAGGCAGCAGCTTTCCTGGTAACTGCTCTTGTCCGTCGCCCTGTCAAGCCTGTCGGTGTTACTGTAGGCGTATCAACTACCAGAGAAGAGATAGATCTCTCTTTCCTTTTACTGGGAAGTAAAACAGGAGCTGCTACTTCGTCAGCACTAATCTTCTTTCTTTTGAATGGAAATATTTTTGACCTTACATCTTGTAGATTGTGATCAGCCCTAAGCTTTTCAACTGGAGTGCAGCCAAGATCAATTTTACATACTGGGCAGGATTCTACCTCCTCATCATTCAACTTCTCATATATACACTTTCTGCAAAAGGTGTGGAGGCACTCGGAGACGGTGGTGGCGTCGCGGAGGAGGCGGCCGCAGAGCGGGCACGTCATGCACCTCGCGAGCAGCTCCCGCTTCACCATCACCACCCCTCCTCTCGCCGCCGCCGCAGCCGCAGCCGAACCACCGCCGCCGCCGCTTCGCCTCCCCCTCTTCCTCCCCGGCCTGCCCCTCCTCCTCCTCCCCCGCTCCTCCACCTCCTCCTCCTCCACTTTCTCCTTCTCATCCTCCCCTCCATCCGCAGCCGCAGCCGCATCGTCGTCGTCCTCCTCCTGCTGGTGGTGCGGCTCCTCCTTCACCACGGCCCTGGAGCACTCCTCCTCCTCGTCCTCGCCGCCGTCGGCCTTGGGCGGCGACGCGGGGGCGGGCTGCATGGCCAGCGGAGGGGAGGGGAGATCGAGGTCGAGGTGGAGGGGGGAGGTGGAGAAGCGCAGACGCGCTGCGCTGCGTCGTGGCCTCCTTCCTCCTGCGTGTGGGTTCGTGGGCTCGTGGCGAGAGCGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0225100.1 | 3 | 24175112 | C | T |
| Osa03LNT0225100.1 | 3 | 24176188 | A | G |
| Osa03LNT0225100.1 | 3 | 24177311 | A | T |
| Osa03LNT0225100.1 | 3 | 24177570 | A | G |
| Osa03LNT0225100.1 | 3 | 24178137 | A | C |
| Osa03LNT0225100.1 | 3 | 24178985 | T | C |
| Osa03LNT0225100.1 | 3 | 24179942 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0225100.1 | osa-miR5793 | Cleavage | 5.0 | 24.32 | 1 | 21 |
| Osa03LNT0225100.1 | osa-miR5337b | Translation | 5.0 | 15.488 | 1 | 21 |
| Osa03LNT0225100.1 | osa-miR395f | Cleavage | 4.0 | 19.238 | 1 | 21 |
| Osa03LNT0225100.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 11.986 | 1 | 22 |
| Osa03LNT0225100.1 | osa-miR1432-5p | Cleavage | 5.0 | 19.521 | 1 | 21 |
| Osa03LNT0225100.1 | osa-miR1860-3p | Cleavage | 4.5 | 23.418 | 1 | 22 |
| Osa03LNT0225100.1 | osa-miR2091-3p | Cleavage | 4.0 | 20.891 | 1 | 22 |
| Osa03LNT0225100.1 | osa-miR1862f | Cleavage | 4.0 | 21.05 | 1 | 20 |
| Osa03LNT0225100.1 | osa-miR1862g | Cleavage | 4.0 | 21.05 | 1 | 20 |
| Osa03LNT0225100.1 | osa-miR3982-5p | Cleavage | 4.5 | 18.275 | 1 | 21 |
| Osa03LNT0225100.1 | osa-miR5150-3p | Cleavage | 4.5 | 17.979 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0225100.1 | 3 | nan | Physiological trait | Eating quality | RZ403 | R19 |
| Osa03LNT0225100.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0225100.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0225100.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0225100.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0225100.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225100.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225100.1 | 3 | n-p3 | Resistance or Tolerance | Other soil stress tolerance | RZ403 | R19 |
| Osa03LNT0225100.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225100.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225100.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0225100.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0225100.1 | 3 | gw3a | Morphological trait | Seed | R19 | RZ403 |
| Osa03LNT0225100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0225100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)