© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0225500.1
GTGCCGAACAATCAAACCATTGGTACAGGGAAACATCATAAGTTACAGATGAAGTCTCTTACAGCTATGAACTGATCATCACTTGTACAGTTGCACTAAACACCAGTCAAAAGAGAACATCAGATCCTCATTTCTTACCTACACATTTTCACTCTCACTAGCACTCAAAGCATCGCAAATGTTCAACCTTAAGGGATTCAGAGACCACTACACTCCACGCATTTTAACCTAAAAGAGCTAGTAGGAACATGGAAGAAGTTAAAAAGCAATTTAACACCGGGCTAAAATTACAAGCGAACCGAGGTTCAGAGGATTCAGGCATCTCCTGCAAGCTGCTTCTTTTGCCTTGATACCTTGGCTTGCAGCTTGTCGAGCTTCGCGCTCATGCTCTTGTGCTGCTCGCTGACTGATCCCTCCTGGGCACTGCACATCTGCGATTTCAGCTTCAGGTTGAACTTCTTGGGGACGCGGGAAGCCCACCCACCGCTCTTGCCACGCCCCAGCTTTTGGATCTCCTGCCTCATGGTTGAGCACTCCTTCTCGAGCTCAGACAAGCGCATCCTCATGTTGTCCATGCCAACCTTGAGGACCTGGTTCTCCCTTACAGCCGTAGCCCATCCCCCGGCCTCGCCTGATGTTGTGATGCTGCTTCGCAGCGGCCTAGATCCCTCGAGGTTGTCGGAGACGAGCAGGCACCCGGCAATTGAGGTTCTTAGCTGGAGTTGCTCAAAGAAGAGGACTTGTACAACAACGCGCAGTGGCAGCCTCTCGTTCTGTGCAGCATGGGTGCATGCTTCCAGGGAGAGCTTCTGGCAGTCCATTAGCCGGCAGAGCTGCTCCCGTTCAGCTTCTGATAGCCAGGAATGTGCCTTCAAATATATATCAATGGCACGATAGAGCCCATCATCCAACGGGCGGGCATACTCAGGCACAGCAGATGCCAGAGCTTGGAATTTTGGAAGTTTCAAATTGATATCTGGTGCGATCTCTGCAAGATAGCCATCAATTAACTTGGCTACAGTAGTGATTGGTGCCAAAGAAGGGGATGCCATGACGTCATCCAAACATGGGGAGGCGGCACCATTAGCCTGGTCCATTGCCAAGAAATGATCAAGAATCCTCTGCACACACTCGACGTTATACAGAGTTTCCATTGTGTATGAGAAATTTGGCAGCAGTAGATCCTCCAGAGTGGCATGGTCCAGTTGCATGCCAATTCGCTTCTCTAAGTTGGAAATGCAAGTGGGGCTGGCTTTTAGAATCATGGCTGTGCGAAGGAGCCCAAGCAAAACTCTTGTAGATGCTAAACCCTTCTGAACAGGCAATAGTCTATCAATCTCCTCAAGTAAGTTCTTCTGTTCCACCTCAGACAGAGTAGCAGTCAGAGGCACTGCTCCCATGCTATGACGCCTATTTAGTCCCGGGAGATACTTTTTAGCATAGTATGTCAAGGATCCAGCAATGATCTCAGGTCGGATCCCACGAGACTCCATGGTAGAAATTAACCTCTTGTACATGTGGAAACTCAATGCTGAAGCATCCTCATACCACCAGTTTGAACTGAAGTTTCTGGGCCTGGCACCTGTGCTGATCCCGTTCCACAGTACACTGCCACCGGGGCTTTGCATAATGCCATGTTCCCTTATTGGCCAACCAAAGAGGTTTGGATCGGTAGTAGCCTTCGATGCTAATGACTCAATGCATCTCTTCACAATTTGAAGGTTTTCAGCATGAGGGAGGAGATCTTCACATGTTTCCAGTGCTTTCAGAGAATCTTTCCAGTTACGAATGATAACTTGGTTAAGGAAAATCTCTGACTGTGAAATCAAGTTGTCCTCAGCTATTTCTTCAGTCATCTGGAGATGCTCAGAGGCACAGCGCAGGTAAACAACATTTTCAGATGAAAGTTCTATTTTCACTCCATAGCAAAACCTTGCTACTAGCTCAAATGACTTTGCACCCCCAGGTATATCATTTAGTATGATCACACATTCGTCTTGGTCTGAAGTCTCCTCTATCAACCGCTCAAGAAAGGCACTTTTTGAAAGTAAAGGGAACTTATGAAGGTGGAAAGACATGTCTCCAACCTCAACAGTAACATCGCTGGGAAGTCCAGTTGTACAGAACCATGCCTGCCCTTGCCTTCTGAAAGCATCAGGCTTTGATCCCAGCTTCACCGACGACGCCATCCCGGGCAGAAATCTCTCTGAACCTCAAACGATTCCGCCGCCGCCGCCTAAGTAGGAGATGGCACGCAAGAACACCCCAACCGCAACCGCGCAAGCCCCCAACCACCGCTCCAGAAGCTCAAACCATGGACGCCATCGAAAAGAGCTCTCTCTCTCTCTCTCTCTGCCTCTTCCAAGAACCACAGAGCAGAGAAGAAGCAGGCTCACCAATTCACGGCCCTCTCCTTTCGGCCGGCCACCAACTAATCCAACCACTCCTCCAAACAAACGAAGAACCACTCCAATGGGGGGAATCAAGAAACCGCAAATGCAGGCGGTTTAATGGTGGTGGGGGGATCACACTGACACGGTGGGAGCAGTAGGAGTAGGAGATGAGAGGAGGCCAGCCAAGCCAGCAGCAGGTAGTGGTGGGCTTCTTGAAGAGGGCAGTTTCTATTCTGTCTTCACTCTCTCTCTCTCTCTCTCTTCTTTTGTGTGGGTTTGAGTGTACTAATCAAGCTTTGAACCATGATGCTTTGTTTTCTTCACTTCAGTTCTCGAGGGATTTTGGTCCCAAGTACAGTACAAGACCCAAAATTTAAGTAAATAAAAAAGGGGGGCAGATTTTTTTTTTTTGGAGAGGAGTACCAACTGTACTATGTGAGAAAAGGGGAGAAAAAAAATAAAGATGAGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0225500.1 | 3 | 24703663 | T | C |
| Osa03LNT0225500.1 | 3 | 24702079 | C | A |
| Osa03LNT0225500.1 | 3 | 24702083 | A | G |
| Osa03LNT0225500.1 | 3 | 24705625 | G | A |
| Osa03LNT0225500.1 | 3 | 24705664 | G | T |
| Osa03LNT0225500.1 | 3 | 24703581 | T | G |
| Osa03LNT0225500.1 | 3 | 24702097 | A | G |
| Osa03LNT0225500.1 | 3 | 24706513 | C | A |
| Osa03LNT0225500.1 | 3 | 24706776 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0225500.1 | osa-miR5791 | Cleavage | 5.0 | 10.032 | 1 | 21 |
| Osa03LNT0225500.1 | osa-miR6245 | Cleavage | 4.0 | 21.74 | 1 | 21 |
| Osa03LNT0225500.1 | osa-miR156k | Cleavage | 4.5 | 18.854 | 1 | 21 |
| Osa03LNT0225500.1 | osa-miR440 | Translation | 4.0 | 23.83 | 1 | 24 |
| Osa03LNT0225500.1 | osa-miR528-5p | Cleavage | 3.5 | 21.223 | 1 | 21 |
| Osa03LNT0225500.1 | osa-miR1874-5p | Cleavage | 4.5 | 19.521 | 1 | 24 |
| Osa03LNT0225500.1 | osa-miR1320-5p | Cleavage | 4.5 | 12.798 | 1 | 21 |
| Osa03LNT0225500.1 | osa-miR2118a | Translation | 4.0 | 22.048 | 1 | 22 |
| Osa03LNT0225500.1 | osa-miR2118j | Translation | 4.0 | 22.048 | 1 | 22 |
| Osa03LNT0225500.1 | osa-miR2118m | Translation | 4.0 | 22.048 | 1 | 22 |
| Osa03LNT0225500.1 | osa-miR2864.1 | Cleavage | 5.0 | 14.772 | 1 | 21 |
| Osa03LNT0225500.1 | osa-miR2877 | Cleavage | 4.0 | 21.06 | 1 | 24 |
| Osa03LNT0225500.1 | osa-miR2118d | Translation | 5.0 | 22.048 | 1 | 22 |
| Osa03LNT0225500.1 | osa-miR2118f | Translation | 4.0 | 22.048 | 1 | 22 |
| Osa03LNT0225500.1 | osa-miR2118k | Translation | 4.5 | 22.048 | 1 | 22 |
| Osa03LNT0225500.1 | osa-miR2118h | Translation | 4.5 | 22.048 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0225500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0225500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0225500.1 | 3 | gw3a | Morphological trait | Seed | R19 | RZ403 |
| Osa03LNT0225500.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0225500.1 | 3 | nan | Physiological trait | Eating quality | RZ403 | R19 |
| Osa03LNT0225500.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0225500.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0225500.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0225500.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0225500.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225500.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225500.1 | 3 | n-p3 | Resistance or Tolerance | Other soil stress tolerance | RZ403 | R19 |
| Osa03LNT0225500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225500.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)