© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0225800.1
AAACCAAATCAAACTCCATTCGCCACCCAAAACTTGGAACACAAAATTGTACATCAGCATCATCAGACTGAAATTACAAGGGGTATGCTGCGACGAAAGTAGCAGGAGGGAAGGCTATTATACACGACTGGACCACGAACACCAGCCATCGGTCTCTCTCCAGCAGTTCAGAAGCACCTTGCAAAATCAGAACTCAAGATCCCAAAAAGAAAGGAAAAAAAAAAAGAGAGGAAAGAATAGCTAGTACAATAACACTATTCCTTTTTGCCATTCCAATTGGATGCAAAAACCACATACAACTGCCTATCCACCAGCAGCCGAGTATATACAGGTGAAGTGAAGCCTCGTCGATCTCCAGATAATCTCTGTGAATTGAATTGTTTTACTGTCGTGTTCGGGAAACAGCTTGGACTGGACGGCGCTGTTCAGGATGATCATCTGTTCATCCATCTTATCTACTACCTTGCTCACTTTAAATGTTTACCTTTTGGCATGGCTGTGGGCCACTGTCTCGCAAACACAAATCACTTTACTCTGTGCAGAAAAAAATAAAAATAGCAAGATCGCGCCGATCGAGACTTCATATATAGATCAGATTAATCAATATCTGGCCACTCTACTATATCCAGGCAAGAGAACCTCGATCGTTAGCTGCTACTTGGGGGCGGCCCCTTGTTGGAGTCGGTGGTCTGTTTGCATTCAGCTCCTGCATCCATGTGTCCTCAATATGATGCTCCGGAGAGGTCTCAGGTGATGTGATTGCCGGGGGCAAAGGATGAATCAGTTTTGGAACGACCACAAGATCTCTGCCCAAAACTAAGATAGCACCGGCATTATTTGCAGTACCACAATAGTTTGTTGCAGAGAAAAGAGTGATCAGGTGACCTTGAGCAAAGCGCTCAAAGCCATCCATCACACACTCATGCGCTCGCACAATTAGTTGAAGATCATTATTGTTGCAAAACTCCATAACACGATCAGGCCCAAACGTAACAAGGCCAGGGCCTCGAGCATTTGGTCTCAATCCTTCAACACTGTCATTCTCGGTTGGATCAGACCATAGAAGATCCATAAGGACAACAGAGCCTGCTTCCATGGTAATTGGTCTCTGAAGATTCTCAATTTGCTCAACATGGTTGATTGACCGACCAATTCCACCATGCATACATATAATTTTCTTTTCGATAAGTGCAGCCAAAGGAAGCCAGTTAAATAATCTATTCATTCGGTGCCATGTCCAAATACCATCTCTCTCACCCATTCGCTCTATGCACTCTATTCGGAAGCCAAACAAAGCATTAATATCTGCAGCTTCATGATTTCCACGAATCAAATGTACATTCTGAGGATACTCAACCTTCAATGCAAGAAGAAGAGTCATTGTTTCTAAGCTATGCTGGCCACGATCCACATAATCACCCAAGAAGAGATAATCAATGTAAGCAATGTCTCCTGCTGTTGAAGGAGCACCATACTCATCAAACAATCGCATGAGGTCACCAAATTGACCATGTAAATCACCAAATATCTTAACAGGAGCTTTAAGTTGCAGAACACTTGGTTCACTTGAAAATATTCTCTCAGCACTATCACATAGATCTGCAATCTCATTGCAGTCCAAGAAGAACTGTCTTCGCACAGGGGGCTTCCAACCACGAGGTTTCAATAGAGATGCAATCACCTTTTTAGGAACACTATTAATGGACATCTGTCGATCTAGCAACTTTCTTGCAGCAGTTGCATTCTCAGGGGTGCCATAGCTGACTCTTCTTCCCTCATTTTCAAATTGGTCAATTGACAGCTGCCTGACCATGCCACCTAAGGCACCTCCAGTTTCTGCAGCCACTACAACAGCTCTATGATGCAACCGAACCCCAGGTGGAGGCGTCATGTTGTTAGAGAGAATACTGTCTGGTTTGATGAGGCTTGAATGCTTGCTGGTCGATGCGGAATCTGGAGATTGCTCCTTGTCAGGCAATTGCTCCATCTCACCGTTAACCTGCCTAGCCTTCACTGCAGCTAAAGTTGCACTAATAGCCTCTGCCTCTGCTGCTGATGCTTCAACTAAGTAATCGACACCTTTGCTTAATCTCCTCTGTCCCTGAAGCACAGCATTCTCAGGGCTGATATCAGTGTACATGTCACCGTTGACAGGAGGGGCAACTGGAGTTCCAAGAACTACAGATCCATCCTGAGCTGATTCTGGAGCTGTTTGTCTCGCTCGCTCATCATTATAAGCATATCTTCCGGGTGTTCTTCCGCTTTGTACATTAGTGGCTGCTGCACTTGCCGCTGCATGATTAGCAGCGGTTGTCGTTTCAGCAGCAGCAAGATCTTCAGCTACAAGAAGATCATCTAGCAGTACCCCTCCTCGTAGACCTCCATAAATGAATATTTGATCACCAACAGCAGCAGCTGCATGCCTGCACCGCCGTGTAAGTTCAACAGCAGCATCACCCCCTGCTGCATCTGCACTATATCTTCCTATCCTGGGAGTTGTGACAACTGACTTTGTGTCGCACCAGACTCCAGCAGCTGTGTCTAGCACTGCAACACTTGAGGAGTCTTCTACCATCCGACCACCTCCAAGAGCTCCTCCTGATACATGGAGACGTGCATTCACAAAAACAGCTGCATGTTGATATCTGGGTGATGGAGAAACACCAGGGGCGATTGCCCACTCCCATCGCCCATCTCTGTGTTTTGCAAGACCATATGCACTTGCCAGCGGCACACTGTTGGCATCCCTCCCACCACAAAGTAAAAGAAGACCATCAGAGCGTGCACTGGCAGTGGCATACATGCATGGTGGCGGTCCTTCACCTTCTGGTTCAAGTTTCCTCCATTCGTATGGCTTAGCTGCAGTATCTAGAGCCCATACATCTGCCAGCGGCCGTTTCCCATCATTTCCACCAATTGTCAACAAAAACCTCTGTCCAACCAAGGCCATGACATGCCCATATCGTGGACCTGGACCAGGTCCTTGAACCACCACTCTGTGCCATCGCGGTCGTTGTTGTGTAAGGTCTAGAACATGAAGATCCTCGGCAGATAAACCAGCAGGGCCAATGCCACCCTGGATGACAACCATGGTTCCAACTGCAGTTGCTACATGTGCGGCTCTTGGTGAAGGAGGCTCACCTTGTGGAGTAAGCCTGCTCCACTTATTTGATAACACATCATAACAGTGGACATCTGCTGTGGCACCGGCAAGACGGATCCCAGCACTGCCGGCCGAGGAGGGTGGCGTGGCGGAGTTGCCCTCGAGCGCCGTGGCGCCCCCGAAGAGGATGAGGCGTGGGCCGATGTACCCCGGCGTGCCTTCCTCCCCGACGGCCGGCACCGCCGTGAGCGTGTGCCCGCAGCGGCAGCCCGGCCCGTCCTCCTTCTTCTCGATCACAGCGCTGACCGCCGTGTACCCCGGCGCCGGCCTGGGCCCCGTGGCTCCCGCGGCCGCAGGAGCCGGAGCTACCGTGGGCGTCCCTGGCGTGGACGGGGCCGAGGCCGACGACGACGACGAGGTCTCGCTCGCTAAGCCTCCTTGCGCAGCAACCGAGGCGGAGGCGGCGGCGGTGGCGGCGGCGTCGGAGTCGGAGTCCGACTCCGTCGTCATGCGGGAGTCCACGTCCATCGCCGAGCCCCCCACCCCACCCCTCCTAGAGTTCGGGGGCCTCGAGATCCGGAGCTGCGCCGCGGGGGTGGCCCCCCCTACGCGGCGCGCCGCCCGCGGCCGCGAATTCTCCGCCGGAACCCTAGCCTCCTCCCCCTCCTCGTCGTCGTCGGCGTCCTCCTCGTCGGCGGCGGCGGCGGAGAGAATCCCGCGGGGGCGGATTCGTCGGGTGGTTTGGGGCTCGGGCTGGGCGCGATCGTGGCGGAGGGGAGGGGGGAGGGAGGAAGTGGTGGGTGGTGGTGGAGCGGCGGCAAAGCTTTTGGCCCCGGGAGATTTGGGAATTGCGTGGGGATTCGGGAGGCCGGCCGGGCCGTGCGCGCGGCGCGGGGGAAGGGAAGACAGAAGAGAGGAGAGAAGAAGAAGGGGGAGGAGGAGTTGGCAATTCCGGGAGGGGTCGGGGGGCCAACGCGCAAATCCGGCTATGGCGACCCCAACGTAGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0225800.1 | 3 | 25042825 | T | G |
| Osa03LNT0225800.1 | 3 | 25043163 | T | C |
| Osa03LNT0225800.1 | 3 | 25044469 | T | A |
| Osa03LNT0225800.1 | 3 | 25045877 | G | A |
| Osa03LNT0225800.1 | 3 | 25046243 | A | G |
| Osa03LNT0225800.1 | 3 | 25048967 | T | C |
| Osa03LNT0225800.1 | 3 | 25050292 | A | T |
| Osa03LNT0225800.1 | 3 | 25049491 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0225800.1 | osa-miR5797 | Translation | 3.5 | 10.123 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR156a | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156b-5p | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156c-5p | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156d | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156e | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156f-5p | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156g-5p | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156h-5p | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156i | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156j-5p | Cleavage | 3.5 | 18.861 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR156l-5p | Cleavage | 3.5 | 18.861 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR815a | Translation | 5.0 | 18.824 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR815b | Translation | 5.0 | 18.824 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR815c | Translation | 5.0 | 18.824 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR1430 | Cleavage | 4.5 | 20.818 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR1440a | Cleavage | 5.0 | 13.72 | 1 | 20 |
| Osa03LNT0225800.1 | osa-miR1428e-5p | Translation | 4.5 | 18.611 | 1 | 22 |
| Osa03LNT0225800.1 | osa-miR1428f-5p | Translation | 4.5 | 18.611 | 1 | 22 |
| Osa03LNT0225800.1 | osa-miR1428g-5p | Translation | 4.5 | 18.611 | 1 | 22 |
| Osa03LNT0225800.1 | osa-miR5339 | Cleavage | 4.0 | 22.915 | 1 | 21 |
| Osa03LNT0225800.1 | osa-miR5500 | Cleavage | 5.0 | 12.503 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0225800.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225800.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0225800.1 | 3 | n-p3 | Resistance or Tolerance | Other soil stress tolerance | RZ403 | R19 |
| Osa03LNT0225800.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225800.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0225800.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0225800.1 | 3 | nan | Physiological trait | Eating quality | RZ403 | R19 |
| Osa03LNT0225800.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0225800.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0225800.1 | 3 | gw3a | Morphological trait | Seed | R19 | RZ403 |
| Osa03LNT0225800.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0225800.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0225800.1 | 3 | nan | Resistance or Tolerance | Insect resistance | G332 | R19 |
| Osa03LNT0225800.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0225800.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)