© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0226400.1
GTAAGCCCGATAGCATTGAGATCAAACGTGCACCCCAAATTCACATTCGCCTCACGAGGCACGAGGGGACTACATGTAAGCACACGAGGCTAAACATACACGATTACATATATATATATATAAATGATCAATCGCATTTTGATGACCATTTGGACAAGAAGCAAATCACGGGTATTAGAATCCCAATTACACAGTGAGAGACAGAACGTGGAAGATTTTCTTGATTTCTGCAGAAAATAAGCTTGTTTCATTGCGTTTTCTTTCGTCATGGACTAGAAGAGTTTGCAGGACCCGTAAGGTCAAATGCGTAGTTGGCCAAGTCATCCATGTACTCATCAAGAGCACTCTCAGATATCTCGAAGTTGTGCTCGATCAGCTTGATTTCACTCATCAGCTCCCTCTCCATCATCTGCAAATCGTCCACAGAGAAACTGGTCTCTACCATCTCTATATCGTGATCCAACAGCAAATCGTTCAACATCTCGATTTCAGCCATAGCGGCATCGTTGTCCCTAACCATCTCAGATGCCAGATCAAGTGCTTCCTTGCTTGGAGAAGTGGTTCTCAGCAGATCATGATCATGAAGAGACCCAACACCTGAACTGAAACTCTCCCTGTACTTCTGGAGGTGACTCTTGATGTTGTGGGTCGTAAGGCTTGTGACACCCATAGCTTGCATTGTCTCCTTCACTGCAGTTGGTTTAGCTTCATAGGGACCTCCATGGTAGGCCACAGCCTCCACAAACATCTTATGGAGATCATCAGACCATCGAAGGTAACTCCTTGTTGGCTGCATAGCCCGGATAAGGCGAGAAACCAGAATGCTCGACATGCAATCATCCTCTTGTGCTGGCTGGCTGTTGGACATTATTCTGTAAATCATACTCAGAGCACTTCAGTAAATATAAAAGACATAAAGCCTGTTTGGATTGTGTATTTGTGTAATCAAACAAGACAGATTCATTAAATTGTCAGTATGGAGTAAATGTGAGGATGTGCCCTTATGGTAAGGGAAAACATTTCCAAATAGAAATGTGAGAGATCAAACATGAGTACCGATGTTTTAAAATCCTATTTAGAAATCAAGAATGCATTAGATCAGAATAAGAGAAACCAGAACTTAATACAAATACTAGTACCAATGTATATGATGAAGAAAAAGGAATTGAGACTGTGCCGTCTATTTTTAGGGAGAAGAGTGAGATGGCATTCCAACCTTGAAAGGATATCACCCCTTTTATATAGTTCTTCCTATCACTACACTGCCTATGGAAGGGACATTCTACATTTTGTCTAGCACATCGGTCATCACAGTTGGTGTACATGGAAGGAAAGGTAGGCAGAGAAGTACAAGATTTCAAAATGGTAAGATAACAAAATGAATGATTATCTCATATTAAGCATGGAGTATAACAGGGTGCTCTTTTCGCAGCACATGCGGCCTCTGCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0226400.1 | 3 | 25518240 | C | T |
| Osa03LNT0226400.1 | 3 | 25518864 | G | A |
| Osa03LNT0226400.1 | 3 | 25518880 | T | C |
| Osa03LNT0226400.1 | 3 | 25519075 | C | A |
| Osa03LNT0226400.1 | 3 | 25519149 | C | T |
| Osa03LNT0226400.1 | 3 | 25518306 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0226400.1 | osa-miR5529 | Cleavage | 4.5 | 18.877 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR6245 | Cleavage | 5.0 | 12.7 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR166b-5p | Cleavage | 5.0 | 23.144 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR166d-5p | Cleavage | 5.0 | 23.144 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395b | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395d | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395e | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395g | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395h | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395i | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395j | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395k | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395l | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395s | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395c | Translation | 4.0 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395a | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR160f-3p | Cleavage | 5.0 | 16.175 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169b | Translation | 4.0 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169c | Translation | 4.0 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169f.1 | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169g | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169h | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169i-5p.1 | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169j | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169k | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169l | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169m | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169n | Translation | 4.0 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169o | Translation | 4.0 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR413 | Translation | 4.0 | 10.48 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR417 | Cleavage | 5.0 | 14.733 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR426 | Translation | 4.0 | 13.989 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395m | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395n | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395p | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395q | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395r | Translation | 4.5 | 18.474 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR169r-5p | Translation | 4.5 | 16.056 | 1 | 21 |
| Osa03LNT0226400.1 | osa-miR395y | Translation | 4.5 | 18.474 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0226400.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0226400.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0226400.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0226400.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0226400.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0226400.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0226400.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0226400.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)