© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0227000.1
ACGGCATACGGCGATGTTTTACACAGGAGAATGTGTTTGCACATAGTAGTACATCGATTGCACAAAGTCTGAAGACTAGCAAGGCTAGCAGCCCGCAGGTGTTCAACCATCTGATTTGTGCCATAACTAAAGGTGACCTTACTACATGGCCGATAAATAATAGTACATGGCTGGCCAGCTCACGAGCAAGAGCAACACGGATTTTTTTTTCTCCGTGCACTTTGCTCTGCAATTGGGAGGGCAAAAAACTGTGCAAGGCATCTTTTGGCTCGCCGCAGTTTAAGTTGGCTACAAGTGTCCCCAAGCACTGCATTACTCACGGTTTAAAGTGCTTTAACCCATAGAAGAATCATTCCAATGGCGCATTCTCCATAATTGCTGCTGACAACTTTGCAGCCGCCTCATCATTTTTCACCCTGATCAAGTATGTTCGAGCTACAACTGTAGCACTGCCAGATTCACTTGGCTGTCCATCTGAGGTATGGAATATCGAAGCAACCGTGCTCTTTTTAACATTCATCTTTATCCCCTTATAGATCAGAGCATTCAGAAGAATTTTGCCCACATCGTTTCTAATAACAATAGTTGGAGTGGACTCTTTGGAAGCTTTCTCGGCACCCTCTTTACACCTAATGTTGAGCTGGCCAACACCAATATCTTTCCAACCATTGGCAGGATCATCATGCTTAACATACACCTTGCATTTGGCTTCATAAACAACAACGATTCCTTTCTCTTCTGCCTTCTTTACAGAAGGGCTGCTAGGTTGTTCAGGTTCAGCATCTTCATCTGCATCACCTGAAGCTTCAGCTGCACTTTTATTTCCTGAGATAGCTGGCTGTTGGTTAACTGAAAACAGTGTCTGGGATGGCATGCTAAAACTCTGGGCACCCGAAGCAGAAAAAATGGATGGCATGCTTGGTGTTGAAAAGCCATTATTTGCACCAAACTGGAAACTCGGTTTGTTGCTATCACCAGGCATGTTTTTCTTGTCACCAAAAATGCCAGTAAAGGCTGGCGTTTTTTGATGAGAAGCGAACGAAAACAAGTTCGGTGAACTTGAATTCTGAAATGCTGGGGAGCTAGCTGCTGTAACTGGACCTTTCTGCCCATTATCTGGGCTTGATTGAACCGTAAACTTGCTGTCTACAGCTGCCGGCGAAATAGTCTTCTCATCATTGGGTGGACCTGGGGACAACACCACATTATTTCAGAAGCATGGGATATGTAGTCCCTCATGCCATCCTCCCAAAGTTCGGCTGGATGATTTTGCAACTGTGATTGTACCCAGCTAGCAAACTGGCTATTGAGTGCTCTCACATGCTTGTTTGCCGCTTCAGCCCGCTGAGGATCTAAAGTAGCGGGTCCTGCCATCATATGCTGATGGGAAGACTCCGCCCTGTGAACACCAAAAGAGGGTCTGTCCATTACTCTCTTACTTGGTAGGGATGCGGCGGAAGCAGCAGGACGAGCGACGGCGACCCTGCTCGCTCGCTCCGCTCCGCTCGCTTGCGCGATGGATGGGGATCGGAGCAGGGGGTGGTGGCGGAGGATGTGCTCACCAGGGTGGATGCGGCGGAAGCAGCAGGACGAGCGACGGCGCCCTGCTCGCTCGCGGGATGGATGGGGATCGCCGGAGGCGGCGGTGGCGGCGGCGGCGGCACAGCGGTGGGCAAGGGCAAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0227000.1 | 3 | 26293654 | G | A |
| Osa03LNT0227000.1 | 3 | 26293752 | T | A |
| Osa03LNT0227000.1 | 3 | 26296337 | T | C |
| Osa03LNT0227000.1 | 3 | 26296752 | C | T |
| Osa03LNT0227000.1 | 3 | 26297408 | A | C |
| Osa03LNT0227000.1 | 3 | 26296528 | T | C |
| Osa03LNT0227000.1 | 3 | 26296504 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0227000.1 | osa-miR395b | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395b | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395d | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395d | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395e | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395e | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395g | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395g | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395h | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395h | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395i | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395i | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395j | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395j | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395k | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395k | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395l | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395l | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395s | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395s | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395t | Cleavage | 3.5 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395t | Translation | 4.5 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395a | Cleavage | 3.5 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395a | Translation | 4.5 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR319a-5p | Cleavage | 5.0 | 18.62 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 17.248 | 1 | 22 |
| Osa03LNT0227000.1 | osa-miR395m | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395m | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395n | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395n | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395o | Cleavage | 4.5 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395p | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395p | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395q | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395q | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395r | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395r | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR1880 | Translation | 4.5 | 18.987 | 1 | 24 |
| Osa03LNT0227000.1 | osa-miR2867-5p | Cleavage | 4.5 | 20.035 | 1 | 22 |
| Osa03LNT0227000.1 | osa-miR395y | Cleavage | 4.0 | 19.014 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR395y | Translation | 5.0 | 22.522 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR5338 | Cleavage | 4.5 | 17.56 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR5521 | Cleavage | 4.0 | 18.226 | 1 | 21 |
| Osa03LNT0227000.1 | osa-miR169i-5p.2 | Translation | 5.0 | 19.319 | 1 | 22 |
| Osa03LNT0227000.1 | osa-miR396e-3p | Translation | 3.5 | 17.429 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0227000.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0227000.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Osa03LNT0227000.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0227000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0227000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0227000.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0227000.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0227000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0227000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)