© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0227900.1
ATGACCAAAAGTATCACCAATCAATTGAAGAATCAGAACTTTTGTATGGCCAAAAGGATCTGACACAAGTTGCTCAGGCACTAGTTAAAACTTAAAACAAACAAAATTTTACCCTAGCAACTAGGACAGATGGCGCTCTCTTTCATTTCTATGCTTCTTTTCTTTTATATGCATCTCTATGCCTTTTTTTTTTGTATATTCATTTGTATGCTTCTTTGGTCACTGTATGTATGTCCTATCTGCAAAACTTATGCAGTTTGCGGATTTACATCGGCGGAGGGTCCAGCGGGCTGTGGTGACAGGCCTCTCTTCTGTAACCTGATGATGGAACTGAGCGACCTCACTGCATGCCGTAGCCGGTTTACAGGGAGTCCTTCCAGTGTAGGGTGAGAAATGTCACTGGTTGTGGGTTGGTTGGTGTCTTCTTTGCAGCTAGATTCACCGGAACTTCCGCTTGCATCTGCATCTCTGTCAACGTGAACTCCTTTCAGAGGTATGTCGTCAGTGTCAGCAAACTGGCAGTAAGCAGAATGAAGACGGTGGTGAATGTCATCCATTCTTCCCGATTGCTCGTCCTCCCTGTCCATGTCAATTAAATCCTGTGCAGGGAGAGTCTTGAATAATGGCCGAAGACGATTGCTGCAATACTGGTTGAATAAAAGAGTGAGGATGATGAGAGGTACAGTGAAGCCTGCAGCTACTGGGGATTCTTTAAGCCCAAAGACACCAAGACAGATGATCTGGGTGAGCACAATAGAGAAGATTGTTGTATAGTGAGCAATCGGCCAATACAGACCACCTGTGTCGTATTTCGTGCAATAAACATTGAGGAACTGGTTGCGGTACACAACATAACCAAGAAAAAAGTACACCAGTAAAAAGGGCAAGATGAGAGGTGCTAATACAGAGCATGTGAATCCCAGTAGTCCAAACAACAGAACTTTTGGCACTTCAGTATGATAGGGAAATGACGGGACAAAGTAGCTATCCTCTTTCATTCTCAAAACATACTTCATTATAAAGTTCCATGTGAGACCAAAGAGTTGCATAAGTTCTGATGATAAACTAGCCCAACCAGAAGTCAGTACATAGGTGGTAAAGAATGTAGCCTGTACAGGTACCGCTCTAGCAAGCACCATAGGAATGTCCTTTGGGCTTGATAACGCATTCACTTGGCTAATTGCAGAACCTGATAGGACATTCACAAAGAATACATTCCAAATAGTGAAGTATAATACTTTACAGCAGGCACTTCTCTTCCTTTCACTGTGGGACACGGGTCCTTCTAATGTAGAAAAAAACATCATGGTTGGGGGAACAGTGTATAAAAATATTTGCAAGATGACACTGGGAAGGTATCCGGTCACTAGCTGGGTTATGTACTTCTTTTTTAATATGCCATTTAGGAAAGGGAGCCTTTGCTGCAGCTGCTCCAACTGAGTTAGACCTTGTATAAATGTCACAGGTATGAGAAACAGGAACATAAAAACAATAGAACCCGAAAGTGTAACTATACGGCGAATCCAAAGCTGCTTGTAGGGTAACCAAAGATTTGACCAATATACGTCATCTCGATCTGGAGCAAGACTAGTAACCCATTCCATAGGATTGGATGTCTGAACAATTTCTGATACGACCAGGGCTGCATACCGAGTTTTGAAAAATACAAAAGCAGCACCACAATCCTTATCAGGTAAGCTCAACTCTGAATCTTTCACATCATGTTTTTTCATCTCTTGCTCAGGTTCAACAGGCAGCAACTCGAACGACTTTGATGAAGCTCCACAAAGACCACATCTATATGTAATTGGTCCGCATCTCTGATCAACTGTGGTGCCCTTGAAATGTTTAAATTTCTTATAAGCCTTCTTTGCACCAGTCACAATCTTCTGAAGTTTCCCGACTTTATAAATAATCTGATGAGAAAGGTAACTCGACACATGATACTTGGTGAAGAAACTCTCAACAGTGCAACTAATTGATTCTTTAGTTGATTTTGGTACTCCACGAACAAGCACAGTAAAATGGCTAGGATTGGTCGATGCTCGAGAAACATGAAGTAACCTCAGCCTAGCAATATGCTTGTACTCAAGGTATAGAAGAAGGCAAGCCACACCAGATATGATGTACAGTGCAACACAATGGACCCAGAGCCATCTTGATCTCTCTTGCATATTTCCAATTGTAAATGTCTCCAATGATGCTGAAGGAATCCGTACATGGAGCATATCTTGTCCAAAATAATTCAGTGGAAGAACTCCAAGTACACAAAGGAAAGCGGCTAAGGAGAATATGCGTATGCTAAATACAAGAATCCTATTGAAGACAACTGCATCCAACCCAGCAGTAGCTAAGAGTTCATCCTCCGTGCATCGAAGACTTCTCAAAATCCAGCTAGCGGATGGAACAAATCTCTCCAAAATAAAAGCCTCCCTGAGCCTACTATTCTCCTCAGCAATCCTTCTTCCAAAATAGACCTTAACATTTTGCGGTTGCTTCCTCAGAACGGAATACAGTGACAAAAAAAGTATACAGAGGCTAATGTTGATTCCAGCTGAGGTCAAAAGAGCGCCGACTTTCATCTCTGTCTTATGTCATCTAAATGCAACAAACTTCGTATCTCCTTTAATTCCGTCGCGACGCGCGCCGAAAAAATCCCACCAATGCCCCCCGGCCGCGCCTCCTCAAAACCCCTCCACTTCGCCAGTCGACCACCGCCGCCGCCGACGCGCGATCGGGATTCGCCGGGGGGGATCGGAGAGATTTCGAGAAAGCAATGTGTGGTGGGAGATTTGCGATTTGGTGGGGGGTTTGGGTTGGAAGTTTCGATCACAAGGAAGAAGAAGAGGAAGAAGAAGGAAGGCAGAGAGACGAAAAGGGAAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0227900.1 | 3 | 26623828 | C | T |
| Osa03LNT0227900.1 | 3 | 26623990 | A | C |
| Osa03LNT0227900.1 | 3 | 26626008 | C | G |
| Osa03LNT0227900.1 | 3 | 26627706 | A | G |
| Osa03LNT0227900.1 | 3 | 26627739 | T | C |
| Osa03LNT0227900.1 | 3 | 26627943 | G | T |
| Osa03LNT0227900.1 | 3 | 26629767 | T | C |
| Osa03LNT0227900.1 | 3 | 26630070 | T | C |
| Osa03LNT0227900.1 | 3 | 26630825 | A | G |
| Osa03LNT0227900.1 | 3 | 26631032 | T | C |
| Osa03LNT0227900.1 | 3 | 26632011 | G | A |
| Osa03LNT0227900.1 | 3 | 26632113 | A | G |
| Osa03LNT0227900.1 | 3 | 26624303 | T | G |
| Osa03LNT0227900.1 | 3 | 26623799 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0227900.1 | osa-miR5794 | Translation | 4.0 | 17.055 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR5837.2 | Cleavage | 4.5 | 9.669 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR415 | Cleavage | 4.5 | 8.258 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR528-5p | Translation | 5.0 | 6.789 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR530-3p | Translation | 5.0 | 23.178 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR812g | Translation | 4.0 | 16.277 | 1 | 24 |
| Osa03LNT0227900.1 | osa-miR812h | Translation | 4.0 | 16.277 | 1 | 24 |
| Osa03LNT0227900.1 | osa-miR812i | Translation | 4.0 | 16.277 | 1 | 24 |
| Osa03LNT0227900.1 | osa-miR812j | Translation | 4.0 | 16.277 | 1 | 24 |
| Osa03LNT0227900.1 | osa-miR2105 | Cleavage | 3.0 | 9.901 | 1 | 20 |
| Osa03LNT0227900.1 | osa-miR2864.2 | Cleavage | 4.5 | 14.775 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR5338 | Cleavage | 5.0 | 15.21 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR5338 | Cleavage | 5.0 | 10.634 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR5338 | Cleavage | 4.0 | 12.245 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR5492 | Translation | 3.5 | 9.926 | 1 | 21 |
| Osa03LNT0227900.1 | osa-miR5494 | Cleavage | 4.5 | 14.753 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0227900.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0227900.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0227900.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0227900.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0227900.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0227900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0227900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0227900.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0227900.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)