© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0228200.1
ACCGAGCATGCAAGAGTGAGGTGTCAAAGCTAGCAGCAGACATGTGGCCCAAGCAGGTGAATCAGCAGCACCAAATGCACTGAGATAAAGCATATCAATGTGAATTATCCAGAGTCAGGTAGAGCCAGCCTTGGTTGCAACGATAGACACCTAGCTGCAGCTAGCAACTCCCAGTAGTACAGCAGCCATAGTAGTAGTAAGATCCCAACAACAGCAAGCAGCCTCGGCTGGAAATCAGTGGAGATTGGGAGAAAGAGTGATAACCAACTAAAAGTTCTACATCTCAACCACACCACAGCTCAACTATAGCATCCGTGGTCAAGCAACCATAGAGAGGGAGGTCAGAGGAGTAAAAGGAGAAGAAGGGGTGTTCAGTTCCTACATGAACAGGGATTTCAGCTCTAGGAGGAGATGGTACTCCAGCTCAAGAAACAAGATGGATCAAGATGGATCAGTAACAGCAGAAGCAGGACAAGAAGAAAGAAATAGAGTAGGAGATGCTTGAGATCCAGGAGAAATAAGGAGCTTCAAATCAAGAAAGAAAGTAGGCAACTGTTGTAAATTGGATTAGGAGGTAAAATCAGCAAGAACAAGAAATCAAAGAAATCGGTAGCAAGTGTGCAAATCAAGTAGGAGGTACTTGAGCTTCAAGAAGAGAGGGGTTTCAGTTTCTGGAGGAGCAGGTGGTGCTTCAGCTCAAAGAGGAGAAATCAGAGTTCCATCAGGAGAACCCTTGAATCAGAGTCCAGAAGAGTAGCTGCAGAACCAGAGTAGGGAACCATATAATCACCTAAAATCATGGCAGGTAATCAGGAGATTGAAGCTGCAGAACCAGAGTAGTGAACCATATATCAGTCACCTAAAATCATGGCAGGTAATCAGGAGATTGAAATGAAAGTACAATTATATCATGAGATGATTCTTGAGTGATGCATATACTAGTATGTGTAGGAGTTGTGAGTTGCATTTGCATCCATTAGAAGATGAACAAGAATATTAAGTAATTTGAGCTGCAGAGTAGGAAGTGTAACCAGTAGGACATAAATATTTTTATTTAACTGATAAGTAAATAGGTTAATTCTAGTTTATAATTATTTGGGGTTAGTAACAAGAAACATTTTAGTTTGTCTAGAATCATTATGTAAATGCATTTAGGTAAACAGCTGCGCATGCATCTGTTTGGTGAATCCTGAAATTATAAATAGTTAGAATTTAGTTATAACTTAAATAAAATAACCTTCAGTACTGAAGAAGGGTTCACCTAATCTCACTTGTTCAGGTTATGTCAAGTAAAACATATACAGATCGTGCTGTAGTAGGTCAGTAAAGGAAATCAAATTGAATTGTTAGAATTAATGAGTAGAGTTATATGTCTCTATAGCAAAGCATCTAGAGCAAATGATTATAGATTAAAACATGGCATATATTAGTTCTGTAAGTATTAATCAATATAAATTGTATCCCACCGTGAGAAACATTAGCAGTCTTAAAAATCAATCAATGCATTTAGTTCTTAATACAAGTGATACTGAATCTATAGGATTAATCTGGATAGCTAGTGTACAAGTATATTTTTAGTTTGAATGAACCTAAACTTATGGGTCTCTACAGCAAGTCATCTAGAGAAGAGCATAATATCATAATCTGTTATAATCTGAACTTTAGTAGTTGATCAGCATAACCTTGCTAAGACCAATACCATAAAACACCATTATTTACTTGTGATTTCAGTAGTTAGTATACTTTGACATCAAGATCAAGATTTATAATTTTTAGGTCATTAAATCCCTTAAGTGATACTACCATGATGCATCATGCATGAATGAAATCATATTAATCCTCCGGATTACTGTTCAGCATGGCAACATAAGGATCTGATCATGTTAGTTTATTAGTTTGTAGCAAATTTCAATATTTCGATGGTCATTGCATAAGCATAATTAAGGATTTAATCATGCTAGTGTGATTTCTATTCATGTCAGCATTCATTCATCATGAACATATAGGCATCATCCATCTTAGCAAGCCAATTTCTCTAGAACCCTAGATCCAGTAAATACAACCCTAAAAGTATAATCATTCGGACAAATTCACAAGCATCACCCGTACATCACCGTTTATAAACAACACCATACAAGAGAGGACACCACACCAGTATATCACAATAGGGATCAGAGCTGGGAGGATGGAATAGGTAGCTCAGCTATGGAGGAGAGGGATGCAGCCACCGGAGTTGCCTGTGTTTCCACCGGCCATCTCCACGGCGGCTGCAGCGGCAGGAGACCGGTGGCTGGGGTTAGCTTAGGGGCAGAGAAGCGAGGAGCCAAGAAACCGATTCAGGCCGGCGACGGCTAGAGGGGTCGCCGGAGTGGGGTGTGGCAGCCGGCGCAGGGGAGAGCGACGGCACTGCCTGGGAAACGGCGGCGCTGGGACTGGGAGAGCGTGAGGGAGAGAAAGAGAACGGGAGAAAAGGAGAGAAGAGGAAGAAGGTGGGTTATGTTTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0228200.1 | 3 | 26973094 | G | A |
| Osa03LNT0228200.1 | 3 | 26974837 | C | G |
| Osa03LNT0228200.1 | 3 | 26975023 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0228200.1 | osa-miR5831 | Translation | 4.5 | 10.376 | 1 | 24 |
| Osa03LNT0228200.1 | osa-miR171f-5p | Cleavage | 4.5 | 16.368 | 1 | 21 |
| Osa03LNT0228200.1 | osa-miR529a | Cleavage | 3.5 | 21.928 | 1 | 20 |
| Osa03LNT0228200.1 | osa-miR531b | Cleavage | 4.5 | 21.639 | 1 | 20 |
| Osa03LNT0228200.1 | osa-miR1874-3p | Translation | 4.5 | 16.66 | 1 | 24 |
| Osa03LNT0228200.1 | osa-miR2090 | Cleavage | 4.5 | 15.215 | 1 | 22 |
| Osa03LNT0228200.1 | osa-miR2093-3p | Translation | 4.0 | 12.635 | 1 | 20 |
| Osa03LNT0228200.1 | osa-miR2118i | Cleavage | 5.0 | 23.161 | 1 | 22 |
| Osa03LNT0228200.1 | osa-miR2864.1 | Translation | 5.0 | 14.362 | 1 | 21 |
| Osa03LNT0228200.1 | osa-miR5071 | Cleavage | 4.5 | 16.837 | 1 | 21 |
| Osa03LNT0228200.1 | osa-miR5081 | Translation | 4.0 | 11.076 | 1 | 22 |
| Osa03LNT0228200.1 | osa-miR5337a | Translation | 4.0 | 10.136 | 1 | 21 |
| Osa03LNT0228200.1 | osa-miR2094-5p | Translation | 3.5 | 15.878 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0228200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228200.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0228200.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0228200.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Osa03LNT0228200.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0228200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0228200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0228200.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)