© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0228300.1
CAGAATCCAAAACAGTCTGATAGATAAACTTTTTGCCAGAATCAAAACAGTGCTGGAGGTTCTAATACATAATAGATATAACTGTGCCAGAGCATTCACTAAACATTCAGCCATGCGAAACTGCAAGCGTTAAACCGCAAATACATAACTTGATTCTGCGAAAGGCTTCACTGGAAGCGATCATCAAAGCGTCCTCCTCTGCTAGGGCGGTCATACGGCCCAGATCTGTCCCTGTAGCTTCCTCCATCATAACGAGCAGGCCCTCCACCACCGTAACGGTCAACACCACCGCCACGTGGGCCATCCCTGTCATAGCCACCACTTATACCACCCCTTGGGCCATCCCTGTCATAGCTTCCACCACCCCTTGGGCCACTCCTATCATAGCCGCCATTGCCACGCACTCCATCCCTCTCGTAGCTTCTTTCTCGTTCCCGGCCATAACTACTAGGCTGATAGCGATCGGGACCTCCATATCTGTCTGGAACATAGCGGTCACCACCTGATGGGTATCGATCATTAGCATATCGGTCACGGCCTCCACCATACCTGTCTCTGACATCAACAGGTTCACGGTACCCACCATCATAACGATCATCCATGTAACGGTCTCCAAACCTATCTGATCCAGAAAAACGGTCTCCTCTGCCACCAGCGCTGAACTTAGAAGAAGAGTATCGCGCAGAACGACCACCACCAGGATTAGGGCAATCACGAGCCCAATGACCAGCACGGCCACACTCAAAGCAATTGCCTGGGGGTGGTCCATCACCTCTACCACCACGATACTCTCCTCGTCCACCACCACTTTCATACCTTGTGTCATCTGTATTCATCTTAGGCTCAGCCTTGTTCACTGATATAGTCCTGCCATCTAATTCTTGACAGTGCATTTCTTTAATAGCGCTATCAACTGCCTCTGGATCTGAAAATGTCACGAAGCCAAAACCACGATGGCGTTGGGTGTGTCTCTCCAGCATGATCTTAGAACAGCGCTGAAATATTGTTATTCCAGATAACAATTATTCAACCGAACAAATAAAATTTCTGTAACACAGCTGCTTGTAGCTGTAACTACCATTGAGACTGAATATTCCCAAGACAGTAAACCTCATTATCACTGACAAGCAGCACAGCAATAAAAAAATCTGTCCATTCTCGGTCCTAGAAAAGTAACACATTGTAGCCAAGCTGTTGTTTTTTGCTGTTACCCCCTTTTTCAACAAAACTTTCAGTTAAACTTACTCATTGGACTTCTCTGAATAGCCCAAACATCACCTGTTGTCTGGATTCCTACTGTACATCCCATTTCAACTAAACCAATTGAAACAAACTAAAAGTCAAGATGCCAAAACCTCCTGGCCATCAAAATATCAAATCAACCAGCTGAGCAGATGAAACCATCTACTAACTTGAGCAAATTCCCACAACAAAGGATGATCATCATGGAAAGTGTCTGATGTGTTCACAGCAAAACAATAGTACTCCCAGGTTCATCATGGGAAGTGTCTGATGTGTTGCCAAGCTTGTCTGGCACATATGTTCACAAGGCAATCTTATGACACCACAAGCGGAGCAGACGAAGGCAGCACAAAGCAATATCTGATAAACACAGTGAATCAAAGGTGTGGCTTGGTTGAGCTGAGGGCTAACATCAGCTTCAGTGGTTATCCTTCAAAATGTCCACTAGAACTACACAATGTCCACTAGAACTACAGAGTGTCCAATGCACCAAAGAACAGATCTGGGATTTCAGCTCCACCTCATCTCGTCAAATATATTACTAAATATAACAAACAATTTATAGGCTACAATGATAGCCCTTAAAACAGATGGTGACTAAGATTGAATAATGCAGAAAACTGTTTTCGCAGTCAACAGCAGAAACATAACTTGAGTAAAACAGAAACAAATAAAACAAATTGATTTCATCATTAACAATTGCACAGAAACAAATAAAACAAATTGATTTCATCATTAACAATTGCACTATTAGTGTTGAACTTTTCATCCAATAGATGATGCAAAACAGAAGGTTCGTACTGTTTTCACAAAAGAGCAATAGAAAACCAAAGAAGTTGTGACAAAAGAACCAAAAAGACAATGTTACATGACATAACACACCTGTCAAAGGAAAAAATAACAATGCGAATGGAAATTACTAATAGCACGTAGACATGGTTCCCTATAAAAGAAATTGTGATAACTAAATAATGCACACAACACCCTTCTAATCTTTTCAACAAACGTATCAGGGTAATATGAACAGTGCACTGCAAAAGGTCAACTGATTTTCATGTCCATAAACTTGGTGAGAAGCCACTGAAGTAATCCCATCAGCAGACTCTGGTGTTGCATAGCAGAATACCAGTATCACCTGGTTCACAAAAGAGCCACAAAAGCTACCGAACCACTGCAGGTATTCAGTGTGAAGTAACACTGCAAAGTGCAAACCTTGTTTCTTCTATCATACCAGAAAGCTGAACGAAAAATGCCAGAGCACAACCAACGGTTGGATCAACTGAATGTTAACTGTTTATGGATGAAGTCCATGGGACACAGCACCCAGCCACGTACTTCAGGCATCTAATCGTACGAGCACCATCACATGTCTCCTCAGGAAAGCAACTTCCACCTCAAGCTAATTCTCAAAGTGCACTCGGGAAAAAAAAAGTTCTCTGTTCCTTTAACAATCAAAAGAACGATGCGCATTCCAAATCCGCTAATTTTCCAGCTCATCAAGCAACGAGTAGCTGGGCGTCGACGACCTTGCCGAAGCGGCGGAACGCGTCGGCCAGCTTGCGCTCGTCGGTGTGGAACGACAGGCCGCCCACGAAGATCCGGCCCTCCTCCTTCCCCGCCATTGCGCCCTCCTCCTCGCCTCCGCCTCGGTGGCTTCCGCTCTCGCGGATTCGGATGGCTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0228300.1 | 3 | 27136195 | A | G |
| Osa03LNT0228300.1 | 3 | 27134957 | A | T |
| Osa03LNT0228300.1 | 3 | 27136158 | T | C |
| Osa03LNT0228300.1 | 3 | 27136354 | T | C |
| Osa03LNT0228300.1 | 3 | 27136710 | G | A |
| Osa03LNT0228300.1 | 3 | 27137411 | A | G |
| Osa03LNT0228300.1 | 3 | 27138279 | A | T |
| Osa03LNT0228300.1 | 3 | 27136311 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0228300.1 | osa-miR5529 | Cleavage | 5.0 | 21.739 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR5821 | Cleavage | 4.5 | 20.341 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR395v | Cleavage | 4.0 | 15.711 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR1320-5p | Cleavage | 4.0 | 11.718 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR2864.2 | Translation | 5.0 | 13.245 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR2864.2 | Translation | 5.0 | 13.434 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR1862f | Cleavage | 4.0 | 6.855 | 1 | 20 |
| Osa03LNT0228300.1 | osa-miR1862g | Cleavage | 4.0 | 6.855 | 1 | 20 |
| Osa03LNT0228300.1 | osa-miR5513 | Cleavage | 5.0 | 13.508 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR2864.2 | Cleavage | 4.5 | 17.942 | 1 | 21 |
| Osa03LNT0228300.1 | osa-miR1862f | Cleavage | 4.0 | 6.153 | 1 | 20 |
| Osa03LNT0228300.1 | osa-miR1862g | Cleavage | 4.0 | 6.153 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0228300.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0228300.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Osa03LNT0228300.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0228300.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228300.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228300.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0228300.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0228300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0228300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)