© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0228500.1
CACAACTTTATCCAAAACAAGAAGAATTACAGAACCGGAGAGAGTATTAATCAAGTCGATTACATCATAAATACAAGAGGGGCAAACAAAAAATGTTCAGCAACATAGAGCCTTTCTCATGGCAAAACTGTTGTATAAGTGCACGCAATGCTTTATTTCCGAGGTATACAAGCATCGTGAGAGATGTGGCACATTGCATCTCCCTATCTATACGGCTATATATGGTGCCACCAGATTCTACAAACATGCAGGTTAGTAGTGGCACCCAGCACCAATGACCAAACACATCGGTGTGTTGGATTTGGATACCATGCAACGGATATGGGGCAAATTTACAATTTACAGGTTGCCCCAAAAATGCCGCCAGCTCCAGCCTCCTTAAGCTATAGTATTACGTTGTGAATTGAGTTACTGCATGCTATTCCAGAGAGCAGAGAATTTATGCCCTCAATGATGCATTGGCCGGCTGTCAAGTTGCCCCGCTCATTTTCCTGAACTTCAGAGGGAGGAAATTGCTTGAATCGGCGTTCCTCTTCTTGCCAAAACTGCTAGGTGTGACACCAGTCGGTGAGACCAAGGAAGTGGTGGTGTTTCGCCGAAACCTCCCCATGTTCCAATATGAGAATCCATCATGTTGGCTTCCAGAACTAGGAGAACGCATAGCAAAATTTCTTGGTATCACACTTTGCTGTCGGTCATGGATATCCTGCAAGAGATCAAGAGTTAATCTGCAGTAATACAACATGTAAAGTTGTAAACAAACAAATGAATCCAGCCTTGGACTACTACAATTCAATTGGTAGTTATTGGTATCCTACAGTTTCTGTTTATGATAAGATCTCTATATGTTATCCTGGAACAAATCACCAACCAACAATTCAACATACAATTATGGCAACTAGCATGGCCTGCCATCCCTTCAGCCAGGAAAAAACAACTCAAGAGTAACAATCACAGGCACTGACGTTAGAAAGATCCAAGGTGAATCTGCTGTTCACTTAGATGGTTCAATTAATTTAAGATTAAGACTTGAGTATGGACCATGAATAAGAGTTGGTTGCTGACAATGGAAAATTATGAGCTCTTGCTAGCAAGATTACTCTTAGACAACATGCTTCTAGGAAATGTCACCTTATAAGTTGAGTGCCACTAGTTACTAGGTACTCCCTCCATTCCAAAATATAAGGCATAACCACCCCTAACCCAAAGACCAAGAAACAATTATTATCATCTTGTAGTTTGGATCATCCTAATCATATCTTACTATAAAGTTATCCCGCACTAACTCCTTAAGCTTAACATGCAAAGATGCCACATCATCATCCACTAACAAGATGCCACATCATCATCCACTAATTAACAAGATGTCACATCATCATCCACTAACAATCATCACATTTAAACATCATGCAAACATGCTATATCTTTATAGTTTTTATAATTTAAGAGCTTTTCAAATACAAACATGTTAAATTATCATCCAACATAATTCACATAATGTTTCAATGTATATCTTCATGCAAAGATGCCACATCATCATCCACTAATTAACAAGATGCCACATCATCATCCACTAACAATCATCACATTTAAACATCATGCAAACATGCTATATCTTTATAGTTTTTATAATTTAAGAGCTTTTCAAACACAAACATGTTAAATTATCATCCGACATAATTCAAATAATGTTTCAATGTATATCTTCATACTAAATTCCCGCAGCAATACGCGGAGTTTCACCTAGTAAATACAATGCATGCATCCAATAGAATTAGAGAACATGAGAGTGTAGGATTTAAAAAAGTAATAATTTAATGGAGAATGGATCATAGTTAATTGCCTACATGTATGCATGCCTTATATTATGGAACATCTAAAAAAAAAGTGGTTGTGCCTTATATTATGGAATGGAGGGAGTAATGATTAGCAAGATACAATTGAAGACATGGGAGAATGAAGACGTGTGGTGTCTAGGAAACTGAACTTTTGAAAGAACGACACGAGTTAAAGCCAAAAATATTTAACTTTTTATGGTACCATGTCAACGATTAGACCTATTTTCTTTATTTTCGTCTATTCGGATTTTAGTTACCGCTTGAAGCACTGAACATCTTCAATTCACCACATATAGATCTTGCACACCTTCCTTTTGATCTAACTTGATATAACTCACCTACAATCACGCACAATCACTATGTAAATAAATTTCTATGGGTAATGCACTTGTGCAGCACTCCAGCTTTACGGCATTCTAATTAACTTGATAGCTGGCAAAACCTGACAGAAATTTACTCATCACTTCAACATAATGATGTTTGATATCTAGTAAGCTGAATTGTAAAAACTTAAGTGAACAGAAAAAAAAAACTGCTGATAGCCATTGCTAAATAAGTCTCAACATAACGTATTGAAGTTAAGTTTATCCTGAAAGGTTTCCTTTAAAAAAAAAAAACTTGGACACCAAACCTTGATTTTCATTATTTTAAGAAGCAACAGTATTCCATCCCACGACTGCCCCTGCCAACTGCGCTAGCACTGTTCTCATCCTGAAAGCTTCATTGTAACGTAACATCTGAAGAGTTCTTATGGGAACCATGTCCACAGCATGGCTAGGGTAAGCAGCAGCTGCAACTCCCATTGCAAAAGGAGATGAGCTGCCGCCGGGAATCATCCGCGACGACGGCCCCGGGAACCCGCCGCTGCCGCTGCTGCTGCCAACCTCGAAAAGTGGCATGGTAGGCGAGAACTCCCCGAAGTCGGTCACCGGCGGCGACGGCGACGGCGCGGGTAGGCGGAAGAACGGCGAGAGCATAGGTGGTCCAGTTCCGCCGCCGCCGCCGCCGCCGCTGCGGACGGGGGAGGCGGCGTCCCACGCGGCGAGCGGCGCGCCACGCAGCGGGCGCGGGCTCCAGCGGAAGGGACCGAATCCGGGGGCGCCCATCGGGGGAGGCGGCGGCGGCGGCGTGCGGGACTCGTCGGTGGAGACGGCGTCGTGGTGGTGCTGCGGCTGCGGGAGCGGAGGCGGGGGCGGGGGAGGGGGCGGCTGGTGGGGGAGGAGGTGGAGGCGGCGGATCCAGACGGAGTTGAGCGGGTCGGGGTGCTGCTGCTGCGGCGGCGGGAGGCGGCGGTGGTGGTGGTAGGACGGCGGCAGCGCGGAGCTGTGGCTCCCGACGGAGCTCCGCAGCGCGAGGTGCTCCGACATGGCGGCGGCGGCGGAGGGCGGGATCGCCGGAGACCGCGAGGAGGACCCCGAAGGCGAAGGCTAGCTTAAGCTAGCCCTCGCACAGCTCTGGTCGTGTGGCTGGGCTCACCTAGGATGGAGGCGAGGTGGGGAGGAAGCAAGCAAGCGGGGGGAGGAATATAAGCTGCCGGGAGGTCGCCGTCGCCGGCGTCGTGGTCGTCGTCGTCGGCGTCGCGGGGAGTGGAGGAAGTGAAGCGAGAGCCGAGAGAAGAGGGTGATGAGGGGATAGGGGTGGACACGAACACACGACCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0228500.1 | 3 | 27435295 | A | G |
| Osa03LNT0228500.1 | 3 | 27432348 | A | G |
| Osa03LNT0228500.1 | 3 | 27432429 | G | A |
| Osa03LNT0228500.1 | 3 | 27432500 | A | G |
| Osa03LNT0228500.1 | 3 | 27433081 | A | G |
| Osa03LNT0228500.1 | 3 | 27433122 | C | A |
| Osa03LNT0228500.1 | 3 | 27433309 | C | T |
| Osa03LNT0228500.1 | 3 | 27433336 | C | T |
| Osa03LNT0228500.1 | 3 | 27436513 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0228500.1 | osa-miR5542 | Cleavage | 5.0 | 12.668 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR5823 | Cleavage | 3.5 | 12.215 | 1 | 24 |
| Osa03LNT0228500.1 | osa-miR6248 | Cleavage | 4.5 | 13.114 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR171f-5p | Cleavage | 4.0 | 11.401 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR413 | Cleavage | 4.5 | 20.162 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR818a | Cleavage | 4.0 | 12.221 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR818b | Cleavage | 4.0 | 12.221 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR818c | Cleavage | 4.0 | 12.221 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR818d | Cleavage | 4.0 | 12.221 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR818e | Cleavage | 4.0 | 12.221 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR444d.3 | Translation | 4.5 | 8.208 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR1435 | Translation | 4.5 | 12.835 | 1 | 20 |
| Osa03LNT0228500.1 | osa-miR1436 | Cleavage | 4.5 | 12.848 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR1439 | Translation | 2.0 | 13.957 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR1853-3p | Cleavage | 4.5 | 11.56 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR1854-5p | Cleavage | 4.5 | 20.613 | 1 | 21 |
| Osa03LNT0228500.1 | osa-miR1861c | Cleavage | 4.5 | 16.16 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR1861n | Cleavage | 4.5 | 16.16 | 1 | 22 |
| Osa03LNT0228500.1 | osa-miR5503 | Cleavage | 4.5 | 12.498 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0228500.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0228500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228500.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0228500.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0228500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0228500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0228500.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0228500.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)