© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0228700.1
CCCCTATATAGCAACAAATTGAAGCTTACTCAAATCTTACAAAAGAAGAATTGGCAACAATCCAAACTAACTCTACCAAAATTTTAGCAATTGCCAAACCTTGCCATACCAAAAAAAAAAAATGTTAAGGCAGTGGCTAGAATCAAACAGGCCCTGAGCCTTTCAGGCCTTCTTCGGCACCAGCCACGGGACAACACTAATCCACCAAGGGCCAAGGCTGTCAGTGACAGGCCCTTTGCAACCGGCAGCTGCAAAGGGCTAGATTGCCCAGATATCCCTCAGAACTAGCAACTGTCTCAGTGAATGCCTTTGGGCTAGAAACAACTGGGCCTCGAGTTCTGGTTTATGCGGCCCATCGCATGGACATCAGCCCATCACTTAACCAGGAAGAGAGCACTCAATTCCCCAGATCGCCGGAGAAACGAGAAGCTCTAGCCTGTCCCGTCGGTTAAGCCGTTGCTGTTCCCGTGCCTGAGTGCGTGCACTATATGCCCAGGATAGCAGGAACGGATTTGAGGCTCCCAGCAATCCACGTCCAGAGATAAAGAGGAGAGAAAAAGAGAAAGAAACCTTCCTTCCAGTCCAATCATAACCTGCAAGATTATAAGCAAATTAATTTGGTTCCCACGAAAAAAATACAATAGTACTAATACTAAATTAATTGGGGGAAAAACATGGACCTCTCATGGACGCTTTGCCTTTGCACCAAGGAAATCTGGGTCACAGATGGGGATAACCACCACCAGCCAGCTGCAGCAGCATCGGACAAGCATCGGACAAGAGAAGAAGGATCAGGCTCCCCCATCAATCCTATCATTATGATCAGCTTCTTTTACCCACTCACAAGCCTCCTCCTTTGGTTCCATGTCTCTCTCGCCTTTATTTTTTTCAGCCGCCGCATCACATGCATGATACGCATGGCCCATCATCCTATGTAGCAAGAATCTGACTTGGGAGGGTTTTCTTTTTCTTTTTCCCTCTTCCAGCTCACCTTCCGAGTTCCGATCATCACAAGAAACATCAATTCGGGTCCCGATAGAAGATGACCGACGCTGGCAGGTGGAATGGGGAGAAGCAACAGCAGTAGACATATCTGGTTTTGCATGAGAACAAAATGAGAAAGCAACAATCGGCTTCTGTTCAATCTTTCACTGTAGTATTTCCATAGAAATCCATCTTGAAATGAAGTGGAAGGCCCAAGCTTTCAGGCAACGGTTAAAACCAAGGCTTCATGAGGATCAGAAGGTCGTAATGCATAGATGTGCTGATATATGTCCATTGTATCCAAGTCAAATTAATTCATGCCTATGATGTTACAGGCATTGGACTTTGGCACCCATGCAGCTGCAGAGTATTCTCAGGAGGCTGGGATTTTTTTTGGTCCAGAGCAGGATTAGGAGGAATATAGGCCATTAAGGTAATTAATTTATCAGGTATTAGTGTAGACGACTATTGTTATTAAGTTATCTGTGGAAGGCAGGACCATGGAATGGATATCATCCATTAGATTCATCAGATCGGACGTTTAGGACTGTCTGTGCACATGAAGATCTGTACATACGCATGTAGCCCAATGCAAGGTACTTTTCTTCGTTAATTGCTAGTGCTAACGGGCAACCAGGCACAGCTCACAGACCATACCCTAATTGTTATTAGGCTTCCATGTAGATATGGCATAGATTATCCTTCCTTTCCACCCTTGAAGGAGCCATTCACTGTCTTCATCAATGACAAAGTCTTTGTGATAGATGTCTTTCACTTTGTCCTTGGCTTTCAGCACAATGTCTTGGTTTAATGGAGACTGGACAAATCCAGCTCTCAGATTCCTCACTTGCCACTGTTTGTATGTCTCCGGTCTCTCGACCCTGTCTGAGCCTTCACATGCAATCACATTGAGTGCTTCCCGGCCAAATAGATCTCTCTCAATTAGTGCACGCTGGGCATCATCCCGTGGCACAGTTGTCTCGAGCATGTCAAATAATGCAGAGAAATGAAATAATGCCTCACGGAACCGTGTGATGAAGAAGGGAACGCTGTACGACCCATTCACAATGCCATGGATAAAAATTGCTGGGTTCACTTGCCTTATGGTATTGAGCACCCTATTCCTAGGACTGTCTATGGCAACTGTTTCATCAATAAGATTTCTGAACCGATACAAGCAATTAACAATCACTACTTCATCTTTCTTAATATTGAGATCCTCAACACAGATTGTTTCCCACTTTGATGCAATGCCTTGGTACTCAAAAGGGACACCAATCTTCTCAGCATATTCTGCAAGCCTCTGCCCTGTCTCTTCGATGCGCTCAGTTGGGCGGAAACCTGGCTGAGGTACATCAATCCCTGTGATACGCAGCTTTGGTGGCCCACCTTCCCTCTTGAAGAGACGTCTAATCAGGCACGGCCATTGGAAGCCGAAGTAAATGCCAAAGTCAATGATATGCACCTTTGATGCATTTTTTGTCAAACTCAAAATTGTTTGATTTGAAAGAAAATGTGAGAGCCTCTTGAATGGGCATGCTGCAAGGTAAAGATGGTATGCCTTGAGCATGTCAGAGGCTGTTGTCCGTTTTGCCACAAGTTTATGGTAAAGTTGGCTCCCTGTTCCAGCCAAGCGAGCCTCAAGACCATCTGCAAAGCAATACGCCAATCTCTGGGAGCCATCTCCATTTGGCTTGGCATGCTGCCTTATTTGCTTTAACAACTCATTAGCAGTCCGGCGGTCATCAGCTGCCACTGCCTGAGCACAGTGGATGAGTAGCGTCCTAAGGTCCACCACATCCTTCTTAGTTGGCTTCCGTCCCCGTGATCGGGTCCCACTTGGTCCTTTTGGCTGAGCAACTTGAGAATTCTTGGAAGCCTCAAAACGCATCATTTTTCGAAGATCAGTTGCCTTCTTCTCAGTTTGACGAAGCAGAACATCAAACATCTCAATCCAATCAGGTTCATCAGAACAAAATGCAGACTGTTTACTATTCCGTCCTTCCATCACGTCAAGGTCTTCACTCTGTCTGTTTTTCTTTACCTTCAAAACCTCTGCCTTGCTGACATTCAGAGAAATAGCTTTCCCTGCTTCTTGACGTTTTGCAACACCACCAGCCTCTAAATCAATCACTACCTTATCGCTACCCGGGAGAAACTTCTGTGCCTCGTCAACACCTCTCCTGAAATCCCATGTTGGAAAGCTCTCAAACAAATACTCAGGGATCCTGCCATTACTAATCAAAGGATCTTCTAGTGTCTCCATAGCGTTGCGAACATCACTTGATGGGCCAACCGGCGGTTGAGAAGAATGACCAGACAAGCTCCGATACTCACTGTGTCCAACATAACGGCGTTGGCTGCTATCGACCGCACCACTAATGTTGCTGCTAGTAACAGAACTAGCCAAGGAGTGTGGATAGCTGCTAGTGCTACTCTCACTCGGGCTGTCGAGGGGCCAAGCTACCAGCTGGCGGTCAGGGGAGGGCGGGAACTTGTGCCCAAGAATGTCATAGAATGGCTTCGCAGCAGCGCGGAGCGCCGCGGACTCCTCCTGGTACATGCTGACCTTCTCATCAATGTCCTCCTCCATGAGCATGCGGCTGATATAGTTGAGCGACTCGTCCGAGATGAACTCCCAGTCCTCTGGGTTGTCGGTCCCCGAGCTGACGGCGGCCCTCGACGCCGTGGAGGAAGCGGCGGAGCTGGGTCCGGCGTCCATCTGGGGCACGATCGCCGGCTGCGGGTCGGCGAACCTGAAGTAATCGCTCTGGCTGCCGTGATCCGTGTAGCCATCATAGGACAAGCCACAGAACATGCCAGATAGCTCCCCGAAATTGTTGTCCAGACCCATCGATAGCCTCCAAAAATGGCACACCTCCGGTTCGGTCCCAGCCGAGACGGGGACGCACGCGGCGTCGCTCCCTCCAAAACCTTTTCCCCCTCTGCGGCCCACCGGTTACCGGGGCCTTCTCGCCGGCGGCGAGCGAGATGCGCGTGGCTCCGGGGCCTCGCGGCTGCTGCTGCTGCTGCTGCTGCGGATCGGAGATGGCGGTGCGTGCGGATCGAGGAGAGGAGGAGGAGGAGGAGGGGTACAGCTACAGCGGTGGAGGAGGAACACGGGGAAGAGAGACGGGAGGGAGGAGGAGGAGAGGGAGAGGGAGTATGGGGAAGAGGGCATCTTGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0228700.1 | 3 | 27586527 | C | T |
| Osa03LNT0228700.1 | 3 | 27583703 | G | C |
| Osa03LNT0228700.1 | 3 | 27583805 | G | A |
| Osa03LNT0228700.1 | 3 | 27585567 | G | A |
| Osa03LNT0228700.1 | 3 | 27586892 | A | G |
| Osa03LNT0228700.1 | 3 | 27587246 | T | C |
| Osa03LNT0228700.1 | 3 | 27587414 | A | G |
| Osa03LNT0228700.1 | 3 | 27588500 | T | C |
| Osa03LNT0228700.1 | 3 | 27588606 | A | T |
| Osa03LNT0228700.1 | 3 | 27588942 | A | G |
| Osa03LNT0228700.1 | 3 | 27589569 | A | T |
| Osa03LNT0228700.1 | 3 | 27589643 | C | A |
| Osa03LNT0228700.1 | 3 | 27590121 | C | T |
| Osa03LNT0228700.1 | 3 | 27591833 | T | C |
| Osa03LNT0228700.1 | 3 | 27592479 | A | G |
| Osa03LNT0228700.1 | 3 | 27592758 | A | G |
| Osa03LNT0228700.1 | 3 | 27592761 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0228700.1 | osa-miR5528 | Cleavage | 5.0 | 20.367 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR5810 | Cleavage | 4.5 | 16.037 | 1 | 24 |
| Osa03LNT0228700.1 | osa-miR5815 | Translation | 5.0 | 17.486 | 1 | 24 |
| Osa03LNT0228700.1 | osa-miR5832 | Cleavage | 4.5 | 17.093 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR2873c | Translation | 3.5 | 15.987 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR168a-3p | Translation | 5.0 | 22.742 | 1 | 24 |
| Osa03LNT0228700.1 | osa-miR169d | Cleavage | 5.0 | 14.956 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR169p | Cleavage | 5.0 | 14.956 | 1 | 22 |
| Osa03LNT0228700.1 | osa-miR440 | Translation | 4.5 | 20.296 | 1 | 24 |
| Osa03LNT0228700.1 | osa-miR529a | Translation | 3.0 | 14.833 | 1 | 20 |
| Osa03LNT0228700.1 | osa-miR1426 | Cleavage | 5.0 | 15.723 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR1435 | Cleavage | 5.0 | 19.358 | 1 | 20 |
| Osa03LNT0228700.1 | osa-miR1435 | Cleavage | 4.5 | 16.521 | 1 | 20 |
| Osa03LNT0228700.1 | osa-miR1858b | Cleavage | 5.0 | 8.757 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR2093-5p | Cleavage | 4.0 | 14.104 | 1 | 20 |
| Osa03LNT0228700.1 | osa-miR2098-3p | Cleavage | 5.0 | 23.785 | 1 | 20 |
| Osa03LNT0228700.1 | osa-miR2118c | Translation | 5.0 | 4.877 | 1 | 22 |
| Osa03LNT0228700.1 | osa-miR2118q | Translation | 5.0 | 4.877 | 1 | 22 |
| Osa03LNT0228700.1 | osa-miR396g | Translation | 5.0 | 15.926 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR396h | Translation | 5.0 | 15.926 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR396d | Translation | 5.0 | 15.926 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR5082 | Cleavage | 5.0 | 22.984 | 1 | 24 |
| Osa03LNT0228700.1 | osa-miR5338 | Cleavage | 4.5 | 6.337 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR5339 | Cleavage | 5.0 | 15.553 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR5508 | Cleavage | 4.5 | 17.221 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR1858a | Cleavage | 5.0 | 8.757 | 1 | 21 |
| Osa03LNT0228700.1 | osa-miR5492 | Cleavage | 5.0 | 12.767 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0228700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0228700.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Osa03LNT0228700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0228700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0228700.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0228700.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0228700.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0228700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0228700.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228700.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228700.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)