© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0229200.1
CTCTCTTTCCAGTAGCAATTTTACTCTTACATCTTGTATAACGCAATTGGCACAGCATATTCATCGGGCCAACATTTGCTGGATCCATGGAACTAGAGTTATATATATACACTGTGCAGTGATGGGATTTTCTACAATTCTATCCATCTATTAGAATAAACATACGATGTCATAGTGGCATCATCTTCTGTTTGGAAGTGGCTAATCAAAATGAAAAGCCTGGTAGCAAAATGGTTAACCAAAAAGAATGGTGTATACCAAAAAGAGAAAAAGAATTTTTCAACTAAATGCCACTTTTCTCTCTCAAAAAGAAAAACTAAAATGACAGCTTCTAATATTTTACACTAGTCCAAGAATAGTTGGTATGCTGATCTGCTGCTTAACAGGCCAATAACTTCTTAAGCTGCATAAAACACAACAGCAACTTCAAACTAAAGAATCGAGCTTCCAGTAAAATTTCCTCTAGCCATATCATTAGTTTATTCAGAATTGATCTACTACTCATCCTTTTAGCTTCCAAAACAGCCTCAGAAGAGATTCGTCCAATGATTACAAATGATTCCATTGAAGAACCTCCAACCAGGGCATGATTGACGGAACGTAAACAATCATTTGTTTTAAGCATCAACAAGATGACCCTTGGCAGTCTCCTTAGAAGCTCTGAGATTTGTGGAAAATATAAGGAAGCATACATCTGAAGTTCAGAACGATCATTACTACTGCCATCTAGAACAAGATGATCGACAGCCGGGTCAATCACACTTTTCCATGGCCTCATTGTGAGAACACCAGCAAAAAGTGCATGAAGATCCTCCCCAGCACCTAGTTTGACACTGTTCTCTTTAATTGATTTTTCATCAGCAAAAACAAGTGCCTTCCAAAGAGAAGCATAGCTTATCCTAGTGGCATAATCAAGTTCTTTGTAAAGACCATGATCAAGAAGAATCAATTGTGGCCTTCTCCATCCAAAAGTTTTTTTGCTATCTTGTGGCAAGGGTCGGATCATCATGTTTGCAGCATGAGGGTCGCAATGAACAAAACCATGCTTGAAAATCATCTCAGAAAATGCTTTACTGACTAGATTTGAAACATCGACTGGGCGAATCCCAAGTTCTTTAATTCCTTTAACATCAGTTACCTCCTTGGCATCCATAAACTCCATTGTGAGAATTCTAGATGAGCTTAGAGTCCAATAGACCTTGGGGACATAAATACTCCCTGCAATGTGCGGAGACAATCTTCTAAAGTTTTGCACGCATTTTTCACTGTTTTTAGCTTCATTCAAGAAATCTAATTCCTTAGGTGCACTTTCACGGATTTCATCGACTAACCACCTGTAGTCAAACGAAGGGAAAATATAATGAAGAGTGTTCACTATCAAACCCACGGTGGCAATATCTATAACAGAAGTATCTGTCAAGTGATCATGTTGAACCTTCACTGCAACTTTTTGCCCATCATGTGTTCTTGCCGCATGAACTTGAGCGAGAGAAGCACTTGCAAGTGGAACAGGATCGAATTCTACAAAAACAGTTTCCGGTGATTCTCCCATATCTTTCCCAAACACTCGGCAAACTTGCTCGTATGATGACACCGGGCATCTCTTCAGCATCGACGCCCTCATCGTCTGCACGTACTCCTCCGGCACAACATACTCCAGCTGGGCGATGTGCTGGCCGAGCTTGATGTAGATGCCGCCGTTGCGGAAGCAGAGCTCCTGGAGGCGGTTTGCGGAGCGGAGGTGGGCGTCGTGCTTGGCGCTGACCCAGGCCGGGGTGCCCGGGTCGAGGCCCCAGAGGGAGTACTGGTAGTCGAAGGCGATGGTGGCGGCGGTGGCGGCGTCGCGGAGGAGGCGCGGGGGCAGGTGCGCGCAGATCTTGAGGGTGGCGGAGGGGTCGTCGGAGTAGGCGATGGCGGCCCCGCCGGCGCCCGCGCCCAGGGCCAGCGCCGCCGTCGCCGCCCGCCGCCACATGGCCGTGGCTGGTTCCGGGGTCTCCGGACTCCGGGCGATTCGCCTCCCTGTGGTTTGGTGTCTCACAGCTTTGCTTCCTTTCTTCCGCCGCAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0229200.1 | 3 | 27990188 | G | T |
| Osa03LNT0229200.1 | 3 | 27989991 | A | T |
| Osa03LNT0229200.1 | 3 | 27990120 | A | G |
| Osa03LNT0229200.1 | 3 | 27990317 | A | G |
| Osa03LNT0229200.1 | 3 | 27992053 | T | C |
| Osa03LNT0229200.1 | 3 | 27992296 | A | C |
| Osa03LNT0229200.1 | 3 | 27992335 | T | A |
| Osa03LNT0229200.1 | 3 | 27992509 | A | C |
| Osa03LNT0229200.1 | 3 | 27993333 | C | T |
| Osa03LNT0229200.1 | 3 | 27993492 | G | T |
| Osa03LNT0229200.1 | 3 | 27994313 | T | C |
| Osa03LNT0229200.1 | 3 | 27994927 | G | C |
| Osa03LNT0229200.1 | 3 | 27994521 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0229200.1 | osa-miR5814 | Cleavage | 5.0 | 10.393 | 1 | 24 |
| Osa03LNT0229200.1 | osa-miR5079b | Cleavage | 4.5 | 8.462 | 1 | 22 |
| Osa03LNT0229200.1 | osa-miR815a | Cleavage | 3.5 | 12.738 | 1 | 21 |
| Osa03LNT0229200.1 | osa-miR815b | Cleavage | 3.5 | 12.738 | 1 | 21 |
| Osa03LNT0229200.1 | osa-miR815c | Cleavage | 3.5 | 12.738 | 1 | 21 |
| Osa03LNT0229200.1 | osa-miR529b | Translation | 4.5 | 10.515 | 1 | 21 |
| Osa03LNT0229200.1 | osa-miR810b.2 | Translation | 4.5 | 12.989 | 1 | 21 |
| Osa03LNT0229200.1 | osa-miR5079a | Cleavage | 4.5 | 8.462 | 1 | 22 |
| Osa03LNT0229200.1 | osa-miR5524 | Cleavage | 3.5 | 14.613 | 1 | 21 |
| Osa03LNT0229200.1 | osa-miR2874 | Cleavage | 4.0 | 13.823 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0229200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229200.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0229200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229200.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0229200.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229200.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0229200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0229200.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0229200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0229200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)