© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0229500.1
AAGGCGAAATCTGATCAAACATTGATTACTCAAGATCGATCACACATCAAGAGTACACTTCTACAAGTTCACTAGACGGCCACAATTCTGATCATAGACACGAATTGCATAATCGAATCAATTTGCAGTCCTTTTATTTCCATCACATAGTTCATAGCCAGCTCTGATGCCATCCAAGCGGCAGCCTAGAACTGAACATGATGATCAATGGATGGCAACTTCAACTTCAGTCTGCGTGTCTTTCATTCTCAGTGCTTTAGCATGTCCCTGAACCAGTAGGCCGACGCCTTGGGGTGGCGCTCGAGCGTGTTGAAGTCGACGTAGACGATACCAAACTTGGACGTGTAACCTGACAGCCACTCGAAGTTGTCCAGGAGAGACCAGGCGAAGTAGCCAGCCACATTGGCGCCCTCGTCGATGGCCTTCTTCAGCTGGGTGAGGTAGCTCCTGTAGAAATGAACCCTCGTGGTGTCGCGCAAGTACTGGTCGCGGCTGAGGTTCGCAGGTTGATCCATTCCGTTTTCAGTTATGACGACTGTCGGATTCCCGTACTTCTGCTTGATGTAGTTCACACATCCGTACATCCCCCATGGCACGATGTAAAGCCAATTAGAATTTGCCTGTGGTCCAATTGGTTTGCCGTTTTTCGCAAAAACATAGGTAACCTGCCAATCGGCTGAGTAACTCGTCGGTGTCTGCTGCATCAATTGCTGGCCCTTCATGTAGCTAGCTGTGTATTGGTTGATGCCAATATAGTCAGCCGAGCCCTTGACCAATCTAGCTTGTTCAGGAGTGAACTTGGGCAGCCTATCTTTCACAAGATCTTGCATTATCTGCGGGTAATGTCCATTTATCAATGGATCAAGATACCAACCAATGTGGAAGTCCCTGGCTCTTTGAGCCGCTGCTTGGTCTTCAGTTGAGTTGGAAAGAGCTTCATACCAATTGAAGTCCAGAACTATTCCAACTTTGCCTTGCTGAGCTGCCTGATACTTAGTCCGGTATCTTGCAACAGCTGCAGCATGTGATAAGAGAAAATTATGAGCAACAATGTATGGTTCTGTTGCTGAGTTCCCACCAGCAGCGCATTTTGTGCACCTTTTAGGAGGATTTGTTCCTTGGTCATAACCAAGAAGTGCTACTATCCTTGGCTCATTAAATGTAAACCAGTGCTTGACACGATTGCCAAAGGTCTTGAAACAGAAGTCCGCGTACTCCGTGAATAGATCCGCCATTTTTGCATTCAACCAGCCTCCGTACTTCTTCTCAAGCGCAAGAGGGAGATCGTAGTGGTAAAGATTGACATAAGGAGTGATACCTTTCTGCAGAAGGTAGTTTATAAGATTGTTGTAATATGCTACGCCTTCTTGGTTAACTCGTCCCTCACCATCTAGGTACACCAAAGGCGCATATTTGGCAGTAACAAATTGTCATTAAAAAAAATGATGCAGGGTATCAGGGCAACATGCTACAATCTGAGTCAGACTCAATGTACCTGGGAAGATCCTGGACCATGAGATTGAAAACCGGTAGGCATCAAAATTCAAACTTTTCATGAGATTAACATCTTCCTTATAGCGATGATATTGATCTGTCGCAACATCTCCATTCTGATTTCCTGCAACATTTCCCGGGGTGTGCGCGAAGGCGTCCCAGATGGACGGCCCGCGGCCGCCGGACGCCGCCATGCCCTCGACCTGGTACGCGGACGTGGCCGTCCCGAACACGAACCGCTTGGGGAACGCGGCGCGGCTCAGCCCGCCCAGCCAGTTGGGCTTGGGCACCGCCGCGGCACCAGCATCCCGCGCCGCCAACAGCGCGAGCGCCAGCACCAGCACCAGCGCGCAGTTCGCTCGCCGTGCAGCCATCACGACCGCGCGCGGCCGGAGCACACCGCCGGCAGGCGGCGGCAGCAGTTGTTCACACAGTGAGACCAAGCAGTAGCGCAAGCACACGCAGCCACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0229500.1 | 3 | 28240752 | A | G |
| Osa03LNT0229500.1 | 3 | 28241328 | G | A |
| Osa03LNT0229500.1 | 3 | 28241673 | A | T |
| Osa03LNT0229500.1 | 3 | 28242311 | G | A |
| Osa03LNT0229500.1 | 3 | 28243589 | A | G |
| Osa03LNT0229500.1 | 3 | 28244997 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0229500.1 | osa-miR319a-5p | Cleavage | 5.0 | 15.65 | 1 | 21 |
| Osa03LNT0229500.1 | osa-miR166j-5p | Translation | 5.0 | 18.687 | 1 | 21 |
| Osa03LNT0229500.1 | osa-miR810b.2 | Translation | 4.5 | 8.906 | 1 | 21 |
| Osa03LNT0229500.1 | osa-miR1435 | Cleavage | 4.0 | 18.774 | 1 | 20 |
| Osa03LNT0229500.1 | osa-miR2874 | Translation | 4.5 | 13.664 | 1 | 24 |
| Osa03LNT0229500.1 | osa-miR2926 | Cleavage | 3.5 | 22.869 | 1 | 20 |
| Osa03LNT0229500.1 | osa-miR3982-3p | Cleavage | 4.0 | 22.23 | 1 | 21 |
| Osa03LNT0229500.1 | osa-miR5074 | Translation | 4.5 | 23.002 | 1 | 21 |
| Osa03LNT0229500.1 | osa-miR5077 | Cleavage | 5.0 | 21.389 | 1 | 19 |
| Osa03LNT0229500.1 | osa-miR5519 | Cleavage | 4.0 | 17.586 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0229500.1 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0229500.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0229500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229500.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0229500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0229500.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229500.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0229500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0229500.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)