© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0229800.1
AGATGCTGAATTAAATTATAATCCACCCATTCTCTGGATCGAAGTGTATCTGTACATGATCTTCATTATTCACTGCTTGCTACAGCCTTAAATCCTCTTTCTGGAAACAAAAATTTCCCTGTCCCCTTCTACATCCAACAGATATATAAAAGGGGGAAAACTGAAGCCGTAAGGAATCCCTAACAAAAGGAAAAAAAAGAAAAGAAAGAAAGAACTACTAGGGAACTGGAAGTACCAATCTGTCACCCACCAAATCACAAAATTTACAGATGCCTCTGTCGTGGCTGCCTCTGAAAATCCAGCCATTCCAGTTCTTGCAACGAATTTGCATCAAACCGCTTTGCAAACCCGATTACCTGTGCTCCTGGGTTGAGGCTTTACCGGTGGCCGATGAGCCGCTTTAACGGATCCCAGTAGATGAAGATGATCGTTCGTGATAATGGATATTCTTTACCGTGCACAGAAACCTACCAAAACCATCTTCAAATCATTGCCGGTGCTCTGGCCTTTGAATGGAATTTACAGTGCACCTTTGATCCATTTCTAGCCATCTTCCACAAAAATTCTGCCAATGAAATCTTGAAATCTTTTCGAATAGAGCTTTGGATCCACAGCAGAAATCGAATTGGGGTCGGTCTGTAATGACTTGTATGCATGCTCTAGCCTTTTCGTGATGTCATAATCCTGGAGAATGTCTATTATCCCAAAATATAGAATCACATCATACACTTCACCAGTCTGATTCGGGGCCAAGAATCCCCCACCATTAAGGAGAAATGGGTCAAACTCACTCCTTCTGGATGCTTGCTCTGCCCGTGCTGGCATGTGTGCCCCCAGTCTAATCAATGGTTTCCGGCAATCAGGTATCCTATCAAAATCACTATCTGAGAAGCACAGCTCTGGCATGCCACCACCACCTTGGAACGACTCCCTCTTCATTGAAAACTTAGGAGAAGCTGTAAAAGTAGATAAGCCTGTCTTTGAGGCAGAGAGGTCATCACAAAAGTGAACTCCCACTAAGAAACTGTAGTCCATGATCCCTTCTGATTCCAAAAATTCACAATCCCGCCTGAGTTGCTCATGGAGATCTCTAAACCAAGTTCGTTGCAATCGAAAAACAAAGTTGAGATCCAAGTCCTTGAGAGTGGTTGTCTCATCAATCTCGTCATCAAATTTGTCTGCTGTCCGTCCATAGGATGAACCTTTTAGATCAAAACGGCGATGAATCCGATATTCTGAGCAGAATAAATTACCCATAACAATAAATCGGACCTTCTGTCCATTAAGAGGCTTCACACAGTGGACACCGTAGAACCTTGTAATTAGAGAGTCACGATATTGACTTACATGTTGGTAATAGCTAGGTAACATCCGAATTAGCAACTTCACTTCTGATTTCTTCACTGTCTTAATCATGAAACGATCATCCTGGGTAAGGTAAAAGAAGCTCCCACTTTTTCCAGGTGAAGACAGCTCTCTCAATGCATCATTCCCGCAGATCGCGATCATGTAATCTGCTGGATCAACTGAGAACAACTTCCTCAAGTGCCTGAACACCATAGGGCAGTAGTCCTTCCACCGGAAATCTGAAGAGGAATGTGGTGGTGTGACCTTTGATCCCTCAGGTGGGAATCGTGTCCAGAACTTCTCCTTTGGATCAAAATCTGCAGGCGAAAGCTCCCGCATTGGCACTGCCGCAGACTTCCCCACTGAGTGCCTGCAAGATGCCACCGCGATCATCCCAAATCGACAACGCCCAATTAAATCCACACATCACAATGCCAGCATTTCGCCACGGCACTTAATAAATTTACCTTATCCCCAATTGCAGCTGCAGCATAAGCTCGTAGTTCTTATGCCCCTTGGAGATTGTCTGCCCTGGCCTTTTGCCCTCCGGTGTAGCAGCCGCCGATGGCGCCCAGCACGTGCCTCCGCTGGCTACTCGCCGGGTGCTCCGCTGTGTGCGAACGTACGGCACACCACCTCCAACCGTCGTGGCCTCCCGGTAGAGCATGGACGCCTCGAGCGCGTCCACGATGTCGCAGGTGATGTCCCCCGCCTCGCCCTCGGACTCCCAGATGCAGATCCGAGGGACGGCGGACGCCTTGTCACCTACTCCCTCGACGGAGGACCTCTTCCTCACCGCGCCTCCGCCACCGGCGCCGACCGGCGGGAAGAACGTGCCGCTAATGGCCGGCATGTCGACGCAGCTCCTCGGCCAGGAACCCACGTAGCGGCTCCCGTCGGGCCAGGTGAACACCCCGGTGCCCCTCGGGACGCCGTTCTCCCACACGCCGTCGTAGCGGCTCCCGTTGGCCCAGATCAGCACGCCACGGCCGGAGATCACCCCGGCGCGCCACTCCCCGACGTACTGGTTGCCGTTGGCCCACACGTAGCGGCCGTGGCCGTCCTGCAGGTTGCGGCGCCACTGCCCCTCGTAGTAGTCCCCGTTGGCGTAGCTCTTGGCGCCCACGCCGTGCCGCCGGTCCGCCGCCCACGCGCCCCGGTACGTGGCGCCGTCGGGGCCGACGAACACGCCCTGCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0229800.1 | 3 | 28359955 | A | T |
| Osa03LNT0229800.1 | 3 | 28359117 | T | G |
| Osa03LNT0229800.1 | 3 | 28361032 | T | C |
| Osa03LNT0229800.1 | 3 | 28361033 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0229800.1 | osa-miR6249a | Translation | 5.0 | 22.869 | 1 | 21 |
| Osa03LNT0229800.1 | osa-miR6249b | Translation | 5.0 | 22.869 | 1 | 21 |
| Osa03LNT0229800.1 | osa-miR167e-3p | Cleavage | 4.5 | 14.41 | 1 | 21 |
| Osa03LNT0229800.1 | osa-miR167e-3p | Translation | 4.5 | 10.919 | 1 | 21 |
| Osa03LNT0229800.1 | osa-miR167i-3p | Translation | 4.5 | 10.919 | 1 | 21 |
| Osa03LNT0229800.1 | osa-miR395w | Translation | 4.5 | 17.345 | 1 | 22 |
| Osa03LNT0229800.1 | osa-miR1861c | Translation | 5.0 | 16.682 | 1 | 22 |
| Osa03LNT0229800.1 | osa-miR1861g | Translation | 5.0 | 16.682 | 1 | 22 |
| Osa03LNT0229800.1 | osa-miR5148a | Translation | 5.0 | 23.858 | 1 | 24 |
| Osa03LNT0229800.1 | osa-miR5148b | Translation | 5.0 | 23.858 | 1 | 24 |
| Osa03LNT0229800.1 | osa-miR5148c | Translation | 5.0 | 23.858 | 1 | 24 |
| Osa03LNT0229800.1 | osa-miR5149 | Cleavage | 3.0 | 24.625 | 1 | 22 |
| Osa03LNT0229800.1 | osa-miR167i-3p | Cleavage | 4.5 | 14.41 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0229800.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229800.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229800.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0229800.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229800.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0229800.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229800.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229800.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0229800.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0229800.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0229800.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0229800.1 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0229800.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)