© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0230000.1
AATCAAAATTAGATGGCTGCAGAGAATACCTCTGAAGTTTACTTACAGCATTGGATTTTTCTCAGACTTCATTAAATACAATAGTATCTCTAAAACTAAATAACCTAGCAGAGGGGGAAAACATGGGGAAAGAAAAGAAATGCGAAAAGCAGAACAACACATACTACACATTTTTAACACTGATTTGATCTTCTTCTTTTTTTTTTTGCCTACACACCACCATTTAAGTCTTAAAATGTGTCCTTTCATCTCAAAATCCAAAAAGTGAAGACTGCACAAAACAATGAGCAAAATTCTTCTACACAGAATCCAAGTCTAAACCTTTCCTTTCCTTTTAGCATCTAATGCCTTACTCTGGAAAGTTCTCAAGACCAATACGATTAGATCACGTAACCTAACATCGCTATCCTCGTTATTTGGTTCTGATATTCCCTGTGTGTTAAATGGTATATTTACACCTCCAGAACTAACTAAAACAAATTGAGTAGTGCGTCCATTCGGAATTTTTGTCTGTAGATTTGATGAATATTTCTCTTCGGTTAGAACTTCATCCTTGACCTTAATATGGTACCCAGTTCGTTTAAGCGTCAAGATGGCTAGTTCCCACTCATCAGAAGAATATCCCAGCACAAGAAGATTAAAGTGAGCTCTCCCATTCGATATATGCATATCAATAGTGTTCTGCATCTCCGGATCGCAAGTTATCTTGCTCCCGTTGTTAGCATACTCTGTAACCAATTCACCCTGACGGGTATTATCATCCATAGGCGTGCAGTCTACAGCCAGAAGAGTGTCAACATCATCAGCAGTAACAACGTAGTCATACATCGTAGCACCTTCAATAGACTGCCTGGTGCCATTATCAAGATATCTAACCCACTGGAAATTACAAAGGGTGGTACCATTGGTAGGGAAACCACATGCTGTTAATGTAAATCCTGGTCTAGGCTCCCCAACAATTTGAAACCCCTCAATACCAGGCAAAGGATCATCATCAGCTGAATACTCTTGATTATCCTGCCTATAAAACTGTGAGTCGTCTAATCTTACTTCTCTAGGACCATTATTTTCTTCAAAATAATTAGAGGGGGTAGCAGCTACTATTTCCTGATGATAATTGGATCCATGGTACATCTGTCCAGTATTTCGGTCATTTGGATCTTGAGCATACTGATGAAAATTGTTCCTAGTTGCATCCGTATTGTAAGATGAGGAAGGTTCATGCCTCAACGGCGTTGCTTGTTGATGATTGGGATTATTATATATGTGTCCAGGTTGAGTTATCTCACCTAAACTGTCATTTAAATATTTGATCTTCCATTGCATTTGGTGGTACAAACGCTTTGTACCAGCTGTAATGGCTGAAGCATTTATTTGAGGTGGGCGAACATTGTATTCTGCTAACATACTAAGCAATGAAGAAGTGAAGAAGTATAGCTCTTCTTCCTCACCTTTCAGATCATTTGCTAGTCTCATATTTTCCTCGACATGGCCTTTTTTCTGGCTTAGTTGCTTCAAAGCACCAGATATAGCATCTTCCTGCTTCTCATCAACAGCCATTCTCAAGTCAAAAAGCTTCCTCTCCAGAATATGTTTTTCGCTCAGCAACTGTAGCTCTTTTACAGAAGCATCTGCAATTTGCTTGCGAAGCAATAAGATCTCTTCCTCTTGTGACCGTGATCTGAAGTATAACCCCTTAGTTTCTGGATCCATCAAACGAGTAATAGAATCTTCTGCAGTCAAGTCATTCTGGAGGGATGCACCCTGGAGTTGATGCAGCAAAGGTTGTAGCGTCACCATTTTGCAAACCATAGTCCCCAACAGACAACGGCATGTTAGTCCTGGTAAGCTCATTTCCAGCACGGTGATTCTCGTTATTGAAATCGACTGGGGCACTGAATGGATCACGCATGTTCTTCCTCGGAGGCGGAAGCAGCAGGGCGACGGGGTAGACGCGCGCGGGACGGATGGAGATCGGCGCAGGCGGCGGGCGGGCGGGAGGGCGAGAGGGCGAGGCGAGCTCGGGAGGAGACGGGAGCGGGGGAAGGCAGAGGGGGCGCGGGGGCGGGGGGGAGGAGGTCGACTTGGGCGCCGAGGGGTCACCGGCGAGAGAACACGCGGCGGAAGCAGCAGGACACGCCGGCTACGCGGGTCGCCGTGGTGGGGATCGCCGCGGCGGCGCCGCGCAGGCGGCGGGGAGGGTGGAGACGGGGGGTGGTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0230000.1 | 3 | 28475589 | A | G |
| Osa03LNT0230000.1 | 3 | 28474507 | T | C |
| Osa03LNT0230000.1 | 3 | 28475255 | A | G |
| Osa03LNT0230000.1 | 3 | 28476059 | T | C |
| Osa03LNT0230000.1 | 3 | 28476060 | G | A |
| Osa03LNT0230000.1 | 3 | 28476193 | C | G |
| Osa03LNT0230000.1 | 3 | 28476278 | G | C |
| Osa03LNT0230000.1 | 3 | 28477910 | C | G |
| Osa03LNT0230000.1 | 3 | 28478068 | T | C |
| Osa03LNT0230000.1 | 3 | 28478610 | G | A |
| Osa03LNT0230000.1 | 3 | 28478870 | A | C |
| Osa03LNT0230000.1 | 3 | 28480116 | A | G |
| Osa03LNT0230000.1 | 3 | 28480416 | A | C |
| Osa03LNT0230000.1 | 3 | 28480455 | A | G |
| Osa03LNT0230000.1 | 3 | 28481032 | C | T |
| Osa03LNT0230000.1 | 3 | 28481487 | T | C |
| Osa03LNT0230000.1 | 3 | 28482636 | G | C |
| Osa03LNT0230000.1 | 3 | 28482528 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0230000.1 | osa-miR5824 | Cleavage | 3.0 | 17.475 | 1 | 24 |
| Osa03LNT0230000.1 | osa-miR5829 | Cleavage | 5.0 | 16.055 | 1 | 24 |
| Osa03LNT0230000.1 | osa-miR1853-3p | Translation | 4.5 | 16.393 | 1 | 22 |
| Osa03LNT0230000.1 | osa-miR1878 | Cleavage | 3.0 | 16.22 | 1 | 24 |
| Osa03LNT0230000.1 | osa-miR1879 | Translation | 5.0 | 19.709 | 1 | 24 |
| Osa03LNT0230000.1 | osa-miR2118o | Translation | 4.5 | 14.761 | 1 | 22 |
| Osa03LNT0230000.1 | osa-miR2868 | Cleavage | 3.5 | 8.926 | 1 | 20 |
| Osa03LNT0230000.1 | osa-miR2928 | Translation | 4.5 | 21.378 | 1 | 20 |
| Osa03LNT0230000.1 | osa-miR5073 | Translation | 4.0 | 13.693 | 1 | 23 |
| Osa03LNT0230000.1 | osa-miR5162 | Translation | 5.0 | 15.394 | 1 | 24 |
| Osa03LNT0230000.1 | osa-miR5519 | Cleavage | 4.5 | 15.942 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0230000.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0230000.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0230000.1 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0230000.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0230000.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0230000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230000.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230000.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0230000.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0230000.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230000.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0230000.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)