© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0230100.2
GAAAAAAAAACATCAGAAAGTATATGTTAATCTCTGCAGTTTTAACTGAAAATGGAGCAAACAGGCCATCCTCTCGCTAGATATACGACGGCCAAATAGCTGTAGAGACAATAGAACTTAAACTAGGGCCAAAAATCAAAACATTCTCTTTCAAACAAAATATGAAATCGCTGTGCAAGTTTTAAACCCTTTCGAGAGATTTTCGCTGCAGGGGGTTGTCTCCAGGCAGCAGCTACGTATACGGAGTCTACACGTCGCGTCGATCACGCTCACGCCGGCGCGATGGACACCTTGTCGACCTCCACGACGTACTCGAGCGTGGCCCCGGGCGGGACCTGCGCGGCGGCGTCGCCGAAGTCGGCGCCGTCGTCGCCGAAGCCGAGCGCCGGCGGGACGACCACCCGCCGCTTGCCGCCGGCCCTCATGGACCGCAGCACGTACTCCACCCCCTCGCACATTCCCCTCGTGTACGGCCTCGACCCCATCACCAGCGCCAGCGGCCGCTTCCCGTCGCCGAACGTGTCCACGAACGCCTCGCCGCCGGTCACCCTCCCCTTCAGGTCGATCACCACCAGGTCCCCCGGCCGCGGCACGTCGCCGCCGCCTACTCGCATCTCGTAGTACCGTATTCCGTTGGGAAGGACGACCTCCTGCTCTTGCTCCACGTCCTTGGTGTTGGCCAGCTGCTGCGCGACCTCGAAGCGGGTCTTGAGCTGCTCGGAGACGACGCCGAAGGCGAGGAACCCGACCCACGCGAGCCCGGCGCCGATGCCGAACCGCCGCGTCAGCGACGTCGCCACCCAGTCCGTCGAGTCCGCGCCGGACGCCGCCGCCGCCGGCGCGCGCCTCGGCCTCGCCTGCGGCTGGGCTTGCATGGACTGCTGCTGCGTCGGCGTCGGCGTCGGCGGTTGCTGCTCCGGCGGCGGCTGGGCGCTGGGCGGGCGCGGCGACTGCGCGCAGGAGAGGTGCGGCTTGGCGGCGACGGGGCGGGCGAGGAAGGCCGGCGAGCTCCCAAGGAAGGTGGCCATGGCGGTGGCACGGTGCGTTCTTGGCGTGGCGAGAGTGAGCAAGCAAAGCAAAGGCTAATGTAACGAGGATTTTTCTGGAGATTTTTCCTCGCTTTTTTTTTTGGGCGTCGTTTTGCAGCGTCTGTTTTGGGGCGAAATGTGTCCACACAAAACAAGCACGGCTACTACACGAGGCTTATCTGCTACTACTCGTTATCTGCTCCGTCTTGAGGGCTACGTGCCGAGGCCTGATGGCGCAATCTGACGGCTTTCCGTTGTCGACAATACGTGATCATAAGCACATCGGGAACACAAAGCAAGCCGCATTGCAAAAAAGTCTTAAAGACATTTATCTTTTTTGAGTCTCACAAAAACTTGGATAAGACTTTCGGTGCTCTATAACCAATTTTGCATAAACCCTTCCCTTCTTAATAAATTTTGGCCGGCTCAGCTATAGAACCAATTTTGCCAAAAGGAAAATCGGTTTCATTACAACAAAAGATCAAGACAACGTCGCAGCGGGCCTGGGCCTGCGGTGTAGCCGCCAGGCAATGCTTCGCCATGGAAGAACGACGCTTGGTTGCAGAACCACCACTACAGTGGTTTCGTACAATATCACAGCGCCCCCGTCTCAAGAAATGGGGTATAGTAATAATATGGAGAACAAGGACGGGCTACAAGAATGAACAAGTTTATATAAACTTACACTTATCATTGTCATCTGTCAGCACCTGAAACAAGCACGGTCCCGCTGGGTACGTCTCTTTGGACTCAAATATTCAATGTTGCTAGACCACATAAAATCTCCACAATGAAGATCAGATACAATATATGCCCTCTCGAAGTACTAATCTAGAATTAGATCCTTCTGTTTCCAAAAGTTCCCTTGTAATACTGGAGGATCTTTGGCCCATTCTGCAGTAGATGCTTCAGTGAGTTGCATAGACTGTGTCATTTCGTCTTGGAGGTCTATCAGGAACTGAGCCTGGCTTAAATTTGGATGCTTCATGCCTTGCAAGTTCAGGTGGCACAGGACTGTTGCTCTGTATAAGCATCTGTTTCAGATCAAAGAAAATGTCAGTGTTCTCCAGAGTTAAAAACGAAGTTGCCAATCCCTTCTTTCCTGCACGTCCAGTTCTTCCAATACGATGTGTGTATGTATCGATTGAACTAGGCATCTCATAGTTGATGACATGAGCAACATCGGGAATATCAATACCACGCCCGGCAACATCAGTTGCCACAAGAACAGTGAACCGCCGGTTTCTAAATCCATCAAGGCTCGTCTCTCTCTGCTCCTGTGACTTCCCACCATGTAGTGTTGTGACGCGGAAGCCTGCCTTGTCTAGATCCTTCGCACGAGCATCTGCTGATTTCTTTGTGTTGCAGAACACAATGGCTGGCTTATCCCCAAGATCTGTGAGTATCTTCTGGAGCCTTGACATCTTCTCTGACTCCTTCGTCATGATCACGTTCTGTGTGATGAGATCTGTGGCCTTGCCAGCTGTACCAATTGTGACAACGACTGGGTTCCGCAGGTACTTCCTAGCAAGCCGCTCCACAGCAGGTGGCATAGTGGCGCTGAACATATAGGTAGTCCTATAGATCGTTTTTGCATCAAGCTCCTCATCCTCATTCTCAGGTTTCAAGTTACTCGATGGCATAGCATCAAGGACTCCAACAACCTGCGGCTCGAAGCCCATATCAATCATCCTATCAGCCTCATCCAGAACCACATAGTTGCACTGGTTGAGCACAGCATACCTCCTCTCCAAGCAATCAAGAAGCCGACCAGGAGTTGCAATAACAACCTCACAGCCCTGCCTAATCTTAAAACCCTGCTCTTCAATGGATTGACCACCAACGATAGACACAACCTTAATGCCAAGATAGGTCGCAAATTTCACAGTCTCTTCCTCAATCTGTTGAGCAAGCTCACGAGTAGGTGCCATAACAACAGCATAAGGACCCTCAGCCTCATTTTCCTCACTTATGGGTGGGAGGCGGGTAATGTACGAAAGCATAGGGAGCACAAAAGCAGCAGTCTTGCCAGAGCCTGTTTCAGCAATACCAATAACATCACGCTGCTGGAGACCAAGTGGAATGGAAGCCATCTGAATCGGCGAAGGTTCCTTGTACCCAGCTTTCTCGACAGCACGAAGCAGCTCAGTACCAAGCTTGCTCTCAGACCACTTCCGCATGGGACGGGGTACCTTAGAACCCTTATAGGATATATTGAAGTCCTCACGGAATATACGCCAATCCCGCTCCGTCATCTCATCAAGAGACTTCTGAGTCCAGTGCCTGTCCACGCGCATGTCGAAGGCATCATACTTCGCTGCAGCATCAGCCTCCTTCTTATCAACTGCGTCGTCCTCAGGGCGGTCATCCAGACCGGCCTTGCGCCGCTGCTCGGCACGGGTCTCCTTCTCATGCGCGGCGGCCACCTTCTTCTGCTCGCGGCGATCAATGCCAGCCAGGAATCCCCGGCCGTAGAGCAGGCGGGCCTCGTGGGGCGACTGGTAGAGCGAGTTCATGTCGCGGCTGGTGTCCTCCGTGTTCTCCCAGTCGAACGAGAAGCGGAACTTCTCAGACGGCTTGATGACCCGCTTCTTGGGCTTCTTGGAACCCAGGTACTGCTCCTTGATCGCGTCCAGCTCCTTCTCCCGCTCCCTCTCCGCCATCTTCTCCAGCCGATCTTTCTCCCTGTCCCCTCGCTCCCTGTCCCTGTCCCCGCGCTCCCGGTCACGGTCGCGGTCGCGGTCACCGCGCTCCCTGTCGCGGTCGCGGCGGGAGGAGTCGCCTCGGTCGCGGTCCCGATCCCGATCTCGGTCGCGGCGGGAGTCGTCGTCGCGGCGGCGCTCCCGGTCACGGTCCCGGTCCCTGTCCCGATCCCGGTCCCGGTCACGGTCACGGTCACGGTCGGAGGAGTCGCGGTGGTGGGAGGAGGAGGAGTCGCGAGGGGGGTTGGAAAGGGGAGGCGGCGGCGGCGGAGGGGGGCGGGGGAGCGACTGGAGCAGGTCGAGGGCGGAGCGGCGCTGGTCGGTGACGGCGGCCTGGCGGCGCTCGAGCGCCAGCTTCTCCCGCTCCTCCCGCGTGAGGAACTTGGGCTTCTCCATCCCGTCGGCGGCGCGCTTCATGGCGGCGGCGGCGGCGGCGGGATTCGTGGAGTTGGGGAGGGTTTGTGTGGAGGACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0230100.2 | 3 | 28567223 | A | G |
| Osa03LNT0230100.2 | 3 | 28567532 | A | G |
| Osa03LNT0230100.2 | 3 | 28568072 | T | G |
| Osa03LNT0230100.2 | 3 | 28568584 | A | T |
| Osa03LNT0230100.2 | 3 | 28569236 | A | T |
| Osa03LNT0230100.2 | 3 | 28570522 | A | C |
| Osa03LNT0230100.2 | 3 | 28571030 | T | G |
| Osa03LNT0230100.2 | 3 | 28569033 | T | C |
| Osa03LNT0230100.2 | 3 | 28568356 | C | A |
| Osa03LNT0230100.2 | 3 | 28568723 | A | C |
| Osa03LNT0230100.2 | 3 | 28568474 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0230100.2 | osa-miR5792 | Cleavage | 5.0 | 22.662 | 1 | 24 |
| Osa03LNT0230100.2 | osa-miR5834 | Cleavage | 4.5 | 18.395 | 1 | 21 |
| Osa03LNT0230100.2 | osa-miR6249a | Translation | 5.0 | 18.489 | 1 | 21 |
| Osa03LNT0230100.2 | osa-miR7694-5p | Translation | 4.5 | 12.606 | 1 | 24 |
| Osa03LNT0230100.2 | osa-miR6249b | Translation | 5.0 | 18.489 | 1 | 21 |
| Osa03LNT0230100.2 | osa-miR2101-3p | Translation | 5.0 | 12.961 | 1 | 22 |
| Osa03LNT0230100.2 | osa-miR2118c | Translation | 5.0 | 14.374 | 1 | 22 |
| Osa03LNT0230100.2 | osa-miR2118q | Translation | 5.0 | 14.374 | 1 | 22 |
| Osa03LNT0230100.2 | osa-miR2871a-3p | Translation | 4.0 | 15.781 | 1 | 21 |
| Osa03LNT0230100.2 | osa-miR2871b | Translation | 4.0 | 15.781 | 1 | 21 |
| Osa03LNT0230100.2 | osa-miR2919 | Cleavage | 3.5 | 4.92 | 1 | 19 |
| Osa03LNT0230100.2 | osa-miR2919 | Translation | 5.0 | 19.092 | 1 | 19 |
| Osa03LNT0230100.2 | osa-miR5145 | Translation | 5.0 | 11.907 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0230100.2 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230100.2 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230100.2 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0230100.2 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0230100.2 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230100.2 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0230100.2 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230100.2 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0230100.2 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0230100.2 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0230100.2 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0230100.2 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0230100.2 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)