© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0230200.1
TAGCACTTCGTGTTTGTATTTTGCATTTTGTATATGAAGAAACGAGAGAGAAGAAAGGGAACAGATAAGCAAAACCATAACCGTACGTGTTACAGCCAATGCTCATCAGACAATGATGCTATGCACAATGCACTCAAGAGCAACCCACATTCCAAAAGCATTACATACAACTTAGAAAATTTACAGGGGGAAAAAAACAGAACAACTAAGAAAGGCACTGAGGCCCTTTTTCTTTAGCCTTTTTTTTATACTCACTCTACCTGGCATCAAAGCTGGCAGAGGCATATGTTTCGTGTTAATGAATTCCAAGGCTTTTTCACAAGCCATGGTTTTTGCCACAAAACACAACTCATGGAGGGGGCAGCTCACCAACCCCTCTTGTTCTTGAGTAAAAGTTTGGAACCCCCCCCCAATCCCCTCATATAATGAAACCAAACGAAAAAGGACGTGGAAAGCGGTCCGCGAAAAAAAACCTGGACCTTTGGAAGGCAGAATTGCTCCATGATCTGCCATCCAGACGGCAATGCCGAACCAACTTGAGAATTCGAGCACCAGGTGGATCTCCTTTCCCTCCTGGTCTGCGCCAAACTTCTGGCATGACAATACTAGTTAGTCAGCAATCTTTTTTCGTTGTTTTATAGCTTTCATCTTCAATGCATTTTCCTCGAACATGATCATAACGCTCTGCAGATGATCTTTTTACCTTCAATCCGTGTAAGGGTGCAGATAATGCGGTGAGAGCTCTCCAGAGTTCCTTGTACGCTGCTCGATCCTTCTCAGGTCCCTAAGATGCTGCAAGATCTCCTGAAGAAGATCAAACCCCTTGTCTCCTTTCTTCAAAGACCTCACACACTGTTTTATAAATTCCTTGTCTGCCTCTAGAGCATGCAGCCGCTCATGGACTTGATCAATTTCATGCGCTATTGCAAGTTTATCTTGCTCATTAGCTGGTTCCAACACAACATTTTCTGTAGAATGGTCTGCCTCAGGATCTTGCCTTGTTAGGAGGTCGTTCCCATCTTCCACGGTAGTGTCATCAAATAATGGGAGCAGCTTTTTTCCCCTATAGCTTACACCTTTTCTTTTGTCATGAAGTTTGAAGTTGCTATCATCATCAGAGAAACCATTTGAGGCACCCATCAAATGGTTTTCTTCTGATAATCGCTTGTCCATCTTAACACTATCTGAATCTTCATCTTCGAGGTCAAATAGCCTCTCCTCTAGCAATTTGAGCTGCTCCAGTATGGAGAGTCTTTCTTCCTCAAAATCTGCGAGTGAGCAACCAAGTGTCCCCAGATGCCTAGCAGTTTCTTGTAACACAGCATCAGTAGGGATACTACCATTGCTTCCATTAAGACCATGGGCAGATTCATCGCCTTCATAGAAACTTTGGGAATGGTCATCGCTGTCCTCAGCACTGGATGATGCTGAGGATGACCCATTGTGGTCATCAGCCTTGTGCCTGGACATTTTTCTCCTTTCCTTCACCTCAAAGAGATGAACCTTGCGTCTGTACAACTCGAGCTCTCTCTCCAGATCTTGTTTCTCCTTCTCTCTCTTCACAACTAGTTCATTCAACCTCTCTAGCGCATCTTGATCATACTCCGATTGTTCTTCCATAAGTCGCTGGTACTGGATTGCCTCCATCTGCATTGCCGCCTTTTGTTCTTGCAAGCGATTTATCATTGCCATAGTCTCATCAGCAGCGATAGCAGCTGCACTCCTCTCATTTTCAAGCTCAGTATATAGGGTGCTCAAAGATTTATGTGCAGATGCCAAAGCAGATTTTAACTGATCAACACTAACCAGTTCAATACTTTCCAGATCAACTGACTTGGTATCAGAAGTCATTGCTTTATGGTCTGGCAACTCATGTAAACCATCGATATCTTCAATGTGAATTGGTGTATCCGGAGCACTCTCTGATTCAACATCATTATAGTCAGGACATAATTTGTTTAAGCTTGTTGATGGTCCATAAGAGAATTGATGTAAGCTTGGTAGAGCAGCCTCTGTTGGATTAACGTTGCCTGCACTGATGTTAGCATCAAACAAGTCTGTTACATACTCAATAGCACGTACTGTCATAAAAGTTGATTGATGATTCAGCTCAGGCTGTTCAGCCTGATTCTCTTTGGTGCCATCATTTGAAATCAAATGAACTTCTTCCCAAGAATCAATTGTCACAGAGTCCAATCCTTGTTTTATCTCAGTCAGTGAAATTCTGTCCTCTTTAATTTCTTCATCAGCATGCTCCCTAGAGTATATCGGCATCAGATTCGATTTCTGGCTCAGCTCACCTGGCTGAATCCACTCCTCATTGTTCTCAGTTGAAGTTTCAGAGGCATGCACTCCAGCTTCCACTGGCATCGAATTCCATCCATTATTGAGATCAGCCTGATGAACTGTCTCAGTATTTCCTTCTAAATTGTCAATACCAAATTCATTCCCCCTCGGATTTGTCAGCACGCAAAGCAATTCTTGTTTTACAGCACCCTGCTCATTCTCAGGTATCTCACTCCCGATTGAAATTTCCTGGTTGTTGTCTTTCAATCCACTATGCTTCTCACAAACTGCATGCAACAAAAATCAAGGCAGATTGCATAGTAACATTAAATATACAAAACAACCAGCACTGAACAACTCGAAGTACATTTAGTGGCGTGAGTTTACTTCTATTTTGTTACAACGTCCATTTCACCCTATCAACATTCAGTTAGTTCAGGCTGTTCACGTTTTTCTTTCAATAAAGGTTCATCAGTACAAATGTGGCAGTACAGGCAAGATGGAAAAATGAATGCCAACTACAGTCTACAGTACCAAGCGATGTTGCAATAGCTAAAATTTGAAATCTAGGCATGGGTATTCAATGAACATCCCCATCACAGTAACATGACAATTTGCAAGAGAAACTGCATTAAATTGTAGTATCGAAATGGTTAACAGAACTAGTATATATGTAGTGAAAATGGCGGTACAATTAAAACATATGTGGCAAAGCAATAGCAGGTGATATTTATAGCCACAGATTTGGTAAACCGGAATACCATGAATGCAAGTTTATCAGAGGAAAGAGTGCCTTACATTGTTGATGATCAGCAGCTAAGCTCTCCGTGGTTTCCCCATCTATCTCGCAGCTGAATCCATCCTCAATACAATCCTGAGAGAGGACTAACGCAGTAATTTCTTCGTCGATCATCTTACTAACCATATCACCCACCTTGTCATCATCATCAGAGGACACCGCGGATTTATCCTCACTGGTGTTAGCCATGTTCTTCAGCACCACATTGCGCTGCTTCGAAGTTACATGATCCATTGCATCATTCCCTTCACCACGGGATTCATATGATACTGCACTCTTTCTGACATTTGACAAATCAGCTGATTCAAGAGGCACCAGCTGCAGGACATTGCCAACAATCTCGGCACATTGAGCTGCCAAGCCAGCCATGGCGCCGATCGGGTCCTCCTCCAATGGCTTCTCATCGAAGAGCTCGATCACAGGGCCCTCCTCGGACACGAAGACCAGATCGCGATTGAGATTTGCCATGGCGGCGTCTCTCCTGTGGCCACAGTCCACGTCGCACGCCGCCGGCGCGGGGAACAAGAACGGCGGCGAGATGAAGCCGCTCTCGAGCGCGACGCCGCAGCACGCGCATGCCAGGTCCCGCTCGCCGAGCTCGCTCCGCCTCATCCACGACGACGCCGCCGCCGCCGCGGAGGCGGACACGCAGTCCTCGCACATGTCCCCGGCGTCCGCGAGCCGCCGGTGCGCGCGGCAGTAGCCGAGGCGCGACACCTCGGCGGCGTGCGAGTCGCACAGCACGCGGCACAGGGGCTCCGCGCCGGCGCCCTGCCCCTCGCCGCGGGGCTCGAAGAGGCTGTCCACGCCGAGGCGGGAGCAGAGGGCGCACGGCGGCGCCAGGCCGAAGAAGGCGGCGAACCTCGATATGAGGTAGGAGAAGACGCCATTGGCGAGGAGGAGAGCTATCAGGATCCACTCGAGGAGCGCGTAGGCGAGCACCCGCGCGACCCGGTTGCTCCTCTTGCACAGCGCCGCGGTGACGACGACGGCGCCCGCCGCCATGGGCGCCTCCGAGACCATCTCCCCAGCTCTCGGTGTTCTCGCCAGCCAGGGAACAAAATGCGATCAAAAGATGCCAAATTCGCCCGCCCAGAATTCGCCGTGTAATCGAAGAAAAGCACAGAAATTCCTTCCTTTTGGCGCTAAATCCCTCGGCGCCCGTCGCCAATCGGATTGAAACAAAGCAAAGAACACGATCCAACCACGATTTCTCCTAGAACAACAAGCCACTCCCACAAACTGCCGATTTCTTCTCGTTCGATGAAGAGAAACAGCAAATAAAAACAAAAAACAAAGCCTTGCTCCTCCACTTGCTCCTTCTAAAAAGCTGAACAAGAACCTCCTCAAGACTATCAATCCGGATTGCAACAAAGAAGACTTTTTTTACAGATGGAATCTGGGATTGCGAACGAGATCAGAGAACCTATAGAGATTGAAATCTTTGATAACGCGGGGAAGAAGTGGGACTAGTGACAGTGACAGGATGATATCATCTAAGTATTCACAAGAACAGTGAGAAGAGGGGGAGAAGAGGAGGAGGAAGGAAAGGGGAGTTTGGTGAAAAGCTCCTCTATAGGCAGAGAAAGCCGGAAGCCTTGGAAGCAGAGAAATATCACCAGTGGAAAAAGAAAAATAAAAGAAAAACA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0230200.1 | 3 | 28576911 | A | G |
| Osa03LNT0230200.1 | 3 | 28575142 | A | G |
| Osa03LNT0230200.1 | 3 | 28575332 | T | C |
| Osa03LNT0230200.1 | 3 | 28575671 | A | C |
| Osa03LNT0230200.1 | 3 | 28577296 | G | A |
| Osa03LNT0230200.1 | 3 | 28574638 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0230200.1 | osa-miR5807 | Cleavage | 3.5 | 23.741 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR5827 | Cleavage | 3.0 | 10.088 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR5179 | Cleavage | 5.0 | 19.589 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR5836 | Cleavage | 5.0 | 18.016 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR5512b | Cleavage | 4.5 | 15.58 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR6255 | Cleavage | 4.5 | 19.067 | 1 | 22 |
| Osa03LNT0230200.1 | osa-miR1861o | Translation | 5.0 | 16.194 | 1 | 22 |
| Osa03LNT0230200.1 | osa-miR156a | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156b-5p | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156c-5p | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156d | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156e | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156f-5p | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156g-5p | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156h-5p | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156i | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR156j-5p | Cleavage | 4.0 | 10.624 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR395f | Cleavage | 4.0 | 14.823 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR159a.2 | Translation | 5.0 | 16.667 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR159a.1 | Translation | 5.0 | 16.229 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR159b | Translation | 5.0 | 16.229 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR159d | Translation | 5.0 | 16.229 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 16.234 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR319b | Translation | 4.5 | 16.234 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR168b | Cleavage | 4.5 | 24.815 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR171c-5p | Translation | 5.0 | 19.137 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR171c-5p | Translation | 5.0 | 12.315 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR171g | Translation | 5.0 | 14.692 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR413 | Cleavage | 3.5 | 13.042 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR528-5p | Cleavage | 4.0 | 6.47 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR530-5p | Translation | 5.0 | 16.683 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR810b.2 | Cleavage | 5.0 | 13.594 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR1442 | Cleavage | 5.0 | 19.589 | 1 | 20 |
| Osa03LNT0230200.1 | osa-miR1853-3p | Cleavage | 5.0 | 21.309 | 1 | 22 |
| Osa03LNT0230200.1 | osa-miR1861a | Translation | 5.0 | 16.194 | 1 | 22 |
| Osa03LNT0230200.1 | osa-miR1882a | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882a | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882b | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882b | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882c | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882c | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882d | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882d | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882e-5p | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882e-5p | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882f | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882f | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882g | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882g | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882h | Cleavage | 5.0 | 12.975 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1882h | Translation | 4.5 | 15.894 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR2094-5p | Cleavage | 4.0 | 19.228 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR2096-3p | Translation | 5.0 | 18.097 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR2871a-3p | Cleavage | 5.0 | 13.445 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR2871b | Cleavage | 5.0 | 13.445 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR5490 | Cleavage | 5.0 | 11.678 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR5512a | Cleavage | 4.5 | 15.58 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR5524 | Cleavage | 5.0 | 10.036 | 1 | 21 |
| Osa03LNT0230200.1 | osa-miR440 | Cleavage | 5.0 | 11.572 | 1 | 24 |
| Osa03LNT0230200.1 | osa-miR1850.3 | Translation | 4.5 | 21.835 | 1 | 22 |
| Osa03LNT0230200.1 | osa-miR2096-3p | Cleavage | 4.5 | 11.848 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0230200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230200.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230200.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0230200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0230200.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230200.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0230200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0230200.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0230200.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0230200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0230200.1 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0230200.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)