© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0230300.1
GGCATAACAGAGTACTGTGGGTATTGCTGCTCCTGCGCCAGAGGGACAGTAATGCCAACAGATTAGACAAGTTTTAGGTTATAAGATCCCTATTTGGTTAAGTTAAAAAAAAAGGCGCAAGAAGAACACCTAGATGTATCATAATACTAATTTCACTTGCCAGTGATGAATGGATGGCTGAGTGCTTCTGGCACAGTAATCCTCTTCTTTGGATCTAGCACAAATATTTTTTCCAGGAGATCTTTGAAGCTGGAAATCATTTTTGGATCATCGCCGGGGCAGCTTGAAATTGCAGAACCAACACCCTTTGGTTTAATGTTCAAAAGCAACCTATTCACAACCGTTTTCGTGATAGGATCCTTCTTTCTAGCAAGAAAGTTCAAGTTCTGGTCGAAGTGTTGCATTGTGAAGGCACCCTTTCGAAGCATCTTCTTAGGGAAGGGGCCCTTCAATTCCATGTGAAGGCGAAGCATGTCATTGTTCGTTGAACCATCAAATAAGATTTTTCCTGTTTAAGTTCAGATAAGCAGCACCCAGCTGACCACATATCCAGTGGATGATCATAAGGCAACCCAAGAATTATTTCAGGTGCCCGGTAGAAGCGGCTCACAAGATACGGTGTGATCTCATTATTTCCAGCAGACATAGCACTACCGAAGTCACACAGCTTCAGCAAATTGTTATCTTTATTTACCAGTATATTGTCTGGTTTAATGTCACAGTGGAGAACACCACAGTGTCTTAGATGCTTCAACGCGATAAAAATATGCTTTGTGTACGCCCTTACAGCAGTCAGTTTAAGCCCAGTGCCATGACCAAATTTCTTTATAACCTCACGAAGATTCATATGAAGAGATTCAAGAACTAAACACAGATGATTTTGATGCATAAAACTAGAAATAATCCGCACACAGTGTTGTTTGTCTTCACGATCTGCAGTTCCCAATTTTTCCAATATAGAAATTTCCCTCTTACCAGACCTGTACTTTTCAATATTGTTGCATATAATTTTGATAGCTACTTCTCTACATCCATCCTTTTGAGCTTTAAGATCCTTCGCATGAACAACAGTCGAGAAAACTCCTTTCCCACGGCGTGCTGTAATTTCATAACGGCCCTGTAGCACTTCTCCAAAATGATAAATGTAATATCCCTCTTCATCTTCCCAGTTGTCATGAAGAGTGTTTTTCTTGGCAAGCATACTGTTTTCATTGCCCAGCTTGCGATCAATAGGTTGTTCTCCATCAATAACGTTGCCAAGAATAACTTGTTTACCTCTCATGGGAATACCCTCCTGAAGACCTGAAGCACTTGTCGTCCTTTTATTATGTGATATCCTCGAGCTTCCCTCCTGAAGACCTGAAGCACTTGTCGCCCTTTTATTATCTGATGTCCCTAAGCTGATTGAAATTTTAGGCAAAGTAGGAGACTTCCTCACATTGTAGAATTTTGCACCGACAAATACATTTGATAATTCATGATCATTTGTAATATCTTCCTTGGCTCTTAAATTGTTCGATCTCTGTTTTGTAGCAGCAGGATCATTGTTTATTTCTTTATTGTCAATGTAATGAGCAGATTTTTCCTGTTGCTTCCGATCCTCGATGTTCTCCAGGTAGTTCTCTTCATCTTCCTCCCTGTAAGGTTCTTTCTTCTCTTCTTCAGGTCTCCTTTTGCATTTGGCCTTTGTATCATCCCCACCAAAGCTTGATCCATCTTTGTAAATGCCAGACATACCATAGTTTGCATGCGTGTAGCTGATACTCCCTTCGTTCCCATTTACTGCTCTAGACCAACAAGCATCCATTTCCTTACCCCTAAAGCCTCTCTTATCTCTCTTATCTATACTATCATTGAGTTTCTCCTCTCCATATCTACTGCCAACTCTATCTGTTTCTTTGTAACTGTTCCTAGCCGTATCATTTTTCCGATTTCTCCATTCTTCGTCTTTCTTCCTTGTGCTACTATTCCATCTATCCATCTCCCTACCTTCTCCATGCCCATGATGTGCACTCGCCTTTTGATCAAATCTACCATCGCCACTTCGTCTCTCATGATAAGCAAGGCCATGCAAATCAACTTTCTTTTCTACCAAACTGCCATGTTTTCTCTCGTCCAGGTGTTTTTCCTCGCTATTACAGATGTCAGTGTGCCTACCAATGTGACAGCCACTCTTTTTCCTTTTCTTATAGCACCCTCTTTCTTCAGTCTCCCACCTCCTGTTTGAATACCTATCCGGCTCACCATGTCTGTCATCAATCCCATGTTCATAATCAAGCCTCACACTGTTTCTTGAGCCATCAGTTTGAAAGCCAGTTTCTCTGCTAGCATGACAGGATCGTAAGCAGTCCTTGGAATGAGCTTCATTATGGTTTCTTGAGCCAGGAGATCTTCTAGAATGATATTCCACAATGGCTTCATGAGCAGCATGATCTGACTTTGCTGGATAATCATGCTCTTGAGATGGGTTTCTAGCTAGCTGGGAGGTATGCAACTCATTTACATGTATATTCAAGTCTGCATCGGAGTTATCACCATGCTCCTATAACCAACGGCAACAAAATGGATGGGGGGCTTGGAACAGACCGGAGCAGGTAGAACACCTTGCACTGAGCCCGTCTCACCGGCATCAGCATCCAGCCCCCTCCCCACACCCACACCCACGGCCGCGGTGGCCTGGTCTAGTATCTCACCGTCCTCGGCCTCGCCCTCCGCCGGATCCGCCGCAGCCGGCGAGACCCTATGGCGGTGGCGATGGTGGCCGCGCTTGTGGCGCTTCGGGGAGGAGGCGCCGTCCTCCGCGTCGTCGTCGTCGTGCGGCGAGCGGCGGTGCTTGCGCGGGGAGAGGTGCGAGCGGGCGGCCTCCTCGCTGGCCATGGAGACCCGAGGGAACCAGCTAGGGCTAGGGTTTGGTACGGAGGAGGAGGGGATCCCGCGCCGCGGCGAGGAAGGGTATGTTGGTTTGGAGTTGGAAGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0230300.1 | 3 | 28638567 | T | C |
| Osa03LNT0230300.1 | 3 | 28639704 | C | T |
| Osa03LNT0230300.1 | 3 | 28639835 | T | C |
| Osa03LNT0230300.1 | 3 | 28639859 | T | C |
| Osa03LNT0230300.1 | 3 | 28640675 | A | G |
| Osa03LNT0230300.1 | 3 | 28641416 | A | G |
| Osa03LNT0230300.1 | 3 | 28642099 | A | G |
| Osa03LNT0230300.1 | 3 | 28642541 | C | T |
| Osa03LNT0230300.1 | 3 | 28643094 | G | A |
| Osa03LNT0230300.1 | 3 | 28643424 | T | C |
| Osa03LNT0230300.1 | 3 | 28642489 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0230300.1 | osa-miR5533 | Cleavage | 3.5 | 22.308 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR166a-5p | Translation | 5.0 | 16.595 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR166d-5p | Translation | 5.0 | 16.595 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR166e-5p | Translation | 5.0 | 16.595 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR399h | Cleavage | 5.0 | 10.316 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 15.925 | 1 | 20 |
| Osa03LNT0230300.1 | osa-miR319b | Cleavage | 5.0 | 15.925 | 1 | 20 |
| Osa03LNT0230300.1 | osa-miR530-3p | Translation | 5.0 | 11.612 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR1854-5p | Cleavage | 5.0 | 8.884 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR1319a | Cleavage | 5.0 | 14.628 | 1 | 24 |
| Osa03LNT0230300.1 | osa-miR2055 | Cleavage | 3.5 | 23.335 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR2868 | Cleavage | 4.0 | 9.385 | 1 | 20 |
| Osa03LNT0230300.1 | osa-miR2868 | Translation | 4.5 | 8.139 | 1 | 20 |
| Osa03LNT0230300.1 | osa-miR2870 | Cleavage | 4.5 | 9.062 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR2928 | Cleavage | 5.0 | 12.34 | 1 | 20 |
| Osa03LNT0230300.1 | osa-miR3981-3p | Cleavage | 3.5 | 11.64 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR5161 | Cleavage | 4.0 | 9.247 | 1 | 20 |
| Osa03LNT0230300.1 | osa-miR5491 | Translation | 4.0 | 6.155 | 1 | 21 |
| Osa03LNT0230300.1 | osa-miR5524 | Translation | 4.0 | 16.453 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0230300.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230300.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0230300.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0230300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0230300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0230300.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230300.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0230300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0230300.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0230300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0230300.1 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0230300.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0230300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)