© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0231300.1
GGCAAAAGCACAGCTTCACTTCATGCTTGGAATATCGTCTACAAACTCTTCAATAAAAGAGCTCTTTTGTATGATGTGAGGGCAAAAGAATACGGAACTCGATTTCTCGGCCCATGCAGAAAGGCACAAGCGGAAACCAAATCTGAAGGGGTGGGTGAGAAAACGCCCCCAGAATTTCGCCGTCAGTCAGTATAGTCGTACTTTTGATCTATGAATGAGGCATAGCGTGCACATATATAATAGCATGCCATGCGCTACCCTAGCTATCCGAGGCGTGCAGCTTACTCTTCACTGCATGAGCCGCCGCACGGTACCATGCTGCTGCAGCAACTGCTCCTGGATCAGGAACTGATGCCACCAGGTCGGGTGCAATGTATGACGACCGTCCTGCCTTCGCTTGCATCTGTTTAGTGGATTCAGCACCAGCTGATGCTGCTTCAGAAGACGCGATAAAGGCAGTCACAGGATCGTCCCCGGCTTTGAGAGACTGTTTCAGAACTGTACATGCAGGAATTAGAGCATCCAACATTGTGCGGTACCCTGCACTAGCACCACCATATTTGCTAACCGCAGCAACAGAGGCCTCCAAAGCATCAGCCCATTCATTTGCACCAATACTTGTGTTCTGTTTTAAGCTTGCATATGCAGCTTTGCAAAGTATGTCATACAAGATTCCACTTGTTCCACCCATCACTCTCCGGACTGTTGACCCAATCTCATTAATTGTTCCAGCTGCATCATTCATTGGGTAGCGCTTCTTCAGATCTTCAAGAATAGTTGTTGCACCTCTATACATCGTGGTTCCACAGTCACCATCACCCACTTTACTATCCCATTCATTTAAGTTATCCTTGATATTGATAATTTCTTTAGCCCCTGCTTCAATAGCAGCCTCCAGAATACACCCTTGCTTGCTTAACTCCTGAGGTTCAGTGAGAATCTCATCATCCTTCCCTGATGGTGATGGTGGTACTGGAACAGGAATTTTTGCTGGTGGACGATTTCCTTCAGATCCAACAGGCCAAGCCGGAGCTTTAGTTGGAGCATCAAGTCGCTGCAAAATGTTTTCATCTGATCTCATAATAGTGATAGAGAACCCAGCCATATCAAGTGAAGTCATAAGTGTGCCAGTGTAGACTCTGTCAACAGCAATCCCATACTCCAATTGTAATTCAGGAACTGCTTTTCTTGCTGCAATCATAAGTTCCATGATAGGAGTTGCACCCAATCTGCATTTCAAAGATGGGATCAAACGATCAGGTAATACTACAGTGTAAGGCAACTGCTCATCATAGGTCAGAATGTTGGACCAAGATACCAAAAGTAAAAGGCTTTTTTTACCTTCCCTGTGAAACTAAATGCTGATAAAGTAAGCAAACCATATGATAATCATTGAGATATGGTGAAACGAAAATTCTAAGATCTTTAGTTACCCATTGATTAGGAGGACAACATTGCTCCCTCTTGTGATAGGAAGATACTGAGTTTCCTGGAAGGATGCATTGCCATCACATAAACAATAAAATGCATCTATAACTAAACAGTGCAAACAAAAATGTATGGATTTCATGAACAGCAGAAAATATGGATCCATGGTACTGAAATGAAATGGACAAAATGACCCACAAAAATCCTGCTAACAACTTTAAATGTTTGAGGTTTCAACTGCAAGCTTTGCTATTCAAGCTAAACTAAAAAAAAAAACCATCCTTTATGAAGAATGGAAAACATGGATTCAAGGTACTCAAATAAAATGGATTAAATTAGTAAAACGGATGCTAATGGTAACTAAAATGCTTGCGGGTTCAACTGAACGAGAAATGGAGAAACATAAAAAGCCTAGAAAAAAAATAGCATATCAAAAACATACCTGTGACAATATCTGCTTAAGAACATGTTCTACTACTACATCAATGGGCTGGAGCTCAACAACAGCAACACCAGGTTCTCCATGAATTCCAAGGCCAAGCTCCATTTGCTTAGGACCCAAGCGATCAGATGTCACCTGACCAGGCAATGTGCAAACAGAAAGTGCAACTCCCATTGTACCAACAACCTCAGATGCATGTTTTGCTTCTGCAGCAACTTCTGCAAGAGATAAGCCAGCATCTGCAGCAGCCCCAGCAACCTTGTGCACAAGGATAGTCCCTGCTAAACCTCTTCTACCAGCTATTCCTCGAGGTGGAGGGAGGGCACAATCGTCTCCAACAATAACCATCTCCATCTTATAGCCTTCAGATTTTGCCTGCTCAGCAGCTAGTCCAAAATTGAGTCTATCACCAGTGTAGTTCTGCAAACGTTCAACAATCAAAGGTCAAAGGTGTGAAAAGGAATGAAGCATAACAAAGAAGCGATTGGCATGGCTCAAATAGAAAATTATGACAAATCAGCACTGGAGAAACAGAAATGCAGGTTGAAATATTGACAAAACAGCAGCGCTAAGCAGCATCAATATCCAAAATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0231300.1 | 3 | 29139862 | C | G |
| Osa03LNT0231300.1 | 3 | 29141756 | T | A |
| Osa03LNT0231300.1 | 3 | 29139507 | C | T |
| Osa03LNT0231300.1 | 3 | 29139750 | A | G |
| Osa03LNT0231300.1 | 3 | 29141757 | A | T |
| Osa03LNT0231300.1 | 3 | 29142193 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0231300.1 | osa-miR5530 | Translation | 5.0 | 15.84 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR5797 | Cleavage | 4.0 | 11.86 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171a | Cleavage | 4.5 | 11.379 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171b | Cleavage | 3.5 | 11.379 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171c-5p | Cleavage | 4.0 | 10.719 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171c-3p | Cleavage | 3.5 | 11.379 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171d-3p | Cleavage | 3.5 | 11.379 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171e-3p | Cleavage | 3.5 | 11.379 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR171f-3p | Cleavage | 3.5 | 11.379 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR444a-3p.2 | Translation | 3.0 | 12.513 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR444b.2 | Translation | 3.5 | 12.513 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR444c.2 | Translation | 3.5 | 12.513 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR444d.2 | Translation | 3.0 | 12.513 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR444e | Translation | 3.0 | 12.513 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR444f | Translation | 3.0 | 12.513 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR1874-3p | Cleavage | 4.5 | 13.926 | 1 | 24 |
| Osa03LNT0231300.1 | osa-miR2918 | Translation | 4.0 | 15.591 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR2918 | Translation | 4.5 | 8.753 | 1 | 21 |
| Osa03LNT0231300.1 | osa-miR812k | Cleavage | 5.0 | 9.771 | 1 | 24 |
| Osa03LNT0231300.1 | osa-miR812l | Cleavage | 5.0 | 9.771 | 1 | 24 |
| Osa03LNT0231300.1 | osa-miR812m | Cleavage | 5.0 | 9.771 | 1 | 24 |
| Osa03LNT0231300.1 | osa-miR529a | Cleavage | 5.0 | 19.43 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0231300.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0231300.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0231300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0231300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0231300.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0231300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0231300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0231300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)