© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0231700.1
CCTAAAAAATGCAACAATTGTATATTGACAGAAGGAATGGGCTGGCATATTTACACTGTTCCATACAATAACCATTTGCAGGCTAGCTTAGCCAGGAGCAAGCACAAGAATGAATGGGCATAGCTGCGATTTCTCCCTAGAGAAACTAAATTGCAGGTTAGCCAGGAGCTAACGCATGCATGACAAAAAGACCAGAAGACTCTTACAAGACCAAGAGATAGGGTTTGCAGGTTAGCCAGGAGCTAACACATGCATATGCCATGAAAACTGGAATACACTACGATACTTTGTCGGACGTGCGCTTGCAGGTTAGCGAGGCGCTAACGCGGTGCATATGTGCACTTCACGACCTTATTTCTTTTCTCGTTTAAATTTGGGGGAGGTGAGGTCAATTAGGTGTTGACCTGGATTTCCCCCAGAGAGTATGGACAGTCTGATGGGTTCTTCACTTCTCGCAGAAGTCGAGGAACCCCATGTACTCATGGTTGTTGATCATGCTGATGCTCTTCTGGGTTCCAACAACACCCATTGTAAGAGCACTCGCGAAGATGACAGAGGATAGGATGAAGACAATCAGAGATGCTCGCTTGAGCACGTGCACGAGTTTCCGGACCAAGGACTGGCCCCAGAATCCAGCCAATATGGAAATGCAGATCAAGTAGACAGCAAAAGGGATTGGGAATCTGTTCAGGAAGTAGAACTCCACTACGGATAGGGATGAGGAGAACATCATCACGAATGTTGCTGTTGCACTTGCAACCTGACAAATAAATGACAATCCCACAAACAGTGAAATAAATGACAAAACAGGAAAAAAGGGGCAAAGAACGCCGAAAATCACATAACATAAATGATTATAAATCACAACATTCTTCTGCATATGAAGAACAAGGCACCGTTTCCTTAGATTTAACTAGTTACATGGGATTCATATCAAATACTGCTATGTTTCTTTTCTGAATGATAATCGAAAGCTTAGGTCCTGCCAATAATAGGGGCACAGTGTAGATGATTGAGGACCAGGCCAGCCAATGCACAATTTAAATAGTTTCAAATATCAGGACACTTTCAAACAATATTTTATCAACCATGCAATTTGGATTATTATTTTTTTTCCTTTTTTGCATCGGATGCCTGTTTTGTAGGGGAAAGATAAAGCAGACATGCCTCCATCATAAATATCCTTTACTAATGTTATGGGAGTCATTAGTCACAGAAATATTCATGGAATGCCTTATTATTTGAAAATTAGTCAGTTTTAGAACTCATAAATGTATAAATCCGTACAGAAATCTTAAACCAGTACAGTGTACCTAATGCTTATCTAGCCTGAAATCAACGTCATAGAATATACTATTGCAAATGAACCTGTCTATATGCAGTTAACTAAAGGTTTCTGACAATCATATAATGATACATAAATAGCTAGTTGGACTCCCTCCTCATGTACACCCTCATGCAAACAGATATATACTAGATAAAGTTAGTAACAAAGTTCTAACAGGCCACTTCAATCCAAAAGTGTCTATGTGCATTTATCAAGGCTACCTAAAGAATTAAAAATGAATATATATGTACGAAGTAACATATATCACAACATACAGTTTTGTCCAGACGGCCAAAATATTTGGCATTACTTGCACATACTGGATGCTGAACTATTTATTTGGCATTCCATAAGCTTTCAATAGTATGAGCAAATTGCGGGAATAGAAGTTGCTCATAATTGCCATTTTGAATTATATATTGCAAGCATATGGTTCTGATGCTAACAGGTTTCATTCAGTATATGCATTTGAAGTGCTGAAAGAATACCGAGTCCAAGTTGTATTGGGATTTTTTTTTCACCTTTTGTAAGGACGTGTGCACACTTATAGAAGCTACATAGACAATGACAAGACCCGTTCTTGTCTCTTCACTGGTCTTGCCTAGATGCAAATGCGTTACAATGATCTATACTAGGATTAGGATGCAGCACGTGGAGCCATGAACCCCCCCCCCCCCCAATGCTTATTTGGCATCCTTATCAGCATGGTACCCCACTCATGCTCATTTTACTTGTTATCCCTCTTGGGAAGGCTAAGCCACGTTCTCTCATGAGTTGCATGTCAGAAACAAGACACTAGCTTAAACACAATCAAATGAAAATTAATTTTCTTAAGTATGATGATCTGAATAACGTTTGAAACTGAACCGCAAGAAATGAAAATAATATAAAATACCTGAGGGATGCACCCAAGCTCAAGGAGAAGTGGACCAAGGATGAACCCACCCCCGGATCCAAGAAGGCCACCAACAGTACCACCAAGCAAACCACAGAAGGCACAGAAGATGAGCTGTGCAGGTGACCACTCAATAGAGGCCTCACAGACACACTCCCAGTTCCCATCCATGCGTCGAGCACGGCTCTCTCTGCACAGCTGTACGCCCTCCCACAGGAATACACTTAACGCAACCGGGACCTGAAGAATGTTGATCACCCAGTAGAAAGTGCTGCATGATTGTGAGTTATTCTTGAAGATTTGCAGCACCAAGAAAGACGACCATACAGTCATGAGAACTAGGATATTCTTCCACCTCAAATTGAACAAGAAAGTCTCCAGAGCAGATTTCTCCTTGGGCTGAGGCTGGCATAGGAGGGGCTCTTCACAACTCGGGTCAATAACCACATCCCTTGCGGCACAGGACGACTTCGATTCCTCTTCTCGCTCCCGCGTCTCCATCTGCAATGGAATAATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0231700.1 | 3 | 29560658 | T | G |
| Osa03LNT0231700.1 | 3 | 29560668 | A | G |
| Osa03LNT0231700.1 | 3 | 29561125 | A | T |
| Osa03LNT0231700.1 | 3 | 29561171 | T | C |
| Osa03LNT0231700.1 | 3 | 29561558 | T | C |
| Osa03LNT0231700.1 | 3 | 29562073 | A | G |
| Osa03LNT0231700.1 | 3 | 29562137 | A | T |
| Osa03LNT0231700.1 | 3 | 29562637 | A | T |
| Osa03LNT0231700.1 | 3 | 29562833 | A | C |
| Osa03LNT0231700.1 | 3 | 29563451 | C | G |
| Osa03LNT0231700.1 | 3 | 29563633 | T | C |
| Osa03LNT0231700.1 | 3 | 29563863 | C | G |
| Osa03LNT0231700.1 | 3 | 29564421 | T | C |
| Osa03LNT0231700.1 | 3 | 29564494 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0231700.1 | osa-miR6254 | Translation | 5.0 | 16.246 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR1437b-5p | Translation | 5.0 | 13.614 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR415 | Cleavage | 5.0 | 12.045 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR1429-3p | Cleavage | 5.0 | 9.198 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR1439 | Cleavage | 5.0 | 14.288 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR1870-5p | Translation | 5.0 | 19.299 | 1 | 24 |
| Osa03LNT0231700.1 | osa-miR1883a | Translation | 4.5 | 16.889 | 1 | 24 |
| Osa03LNT0231700.1 | osa-miR1883b | Translation | 4.5 | 16.889 | 1 | 24 |
| Osa03LNT0231700.1 | osa-miR2096-3p | Cleavage | 4.5 | 19.218 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR2871a-3p | Cleavage | 4.0 | 16.246 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR2871a-3p | Cleavage | 5.0 | 12.661 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR2871b | Cleavage | 4.0 | 16.246 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR2871b | Cleavage | 5.0 | 12.661 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR2872 | Cleavage | 4.5 | 20.472 | 1 | 21 |
| Osa03LNT0231700.1 | osa-miR2921 | Cleavage | 4.5 | 18.821 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0231700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0231700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0231700.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0231700.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0231700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0231700.1 | 3 | qPHT3-2 | Resistance or Tolerance | Drought tolerance | RZ519 | RZ448 |
| Osa03LNT0231700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)