© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0020800.1
GCAACAAACGAGCAATTAGCTGGTTGAATAATATAGTCAACGGTAACACTGGGAATACATAACAAAGGGATATACAAAACATTGTATCCGATCCCGATGGCTAGGCCTTGTTTCTTGTAAAACTCTAGGCGCATCTGACAATATATGGTCATTGGTCAGCTATAACAGCCGGTCAGTATTCTTCAGAAAGGTTTAAATCGAAACAAATGAGACAATTAGCAGGTCAGCATATAAGGAGGCAACAATTGGCTCCTATCAACAATTTAGAACACATGAAACAAGGGAAATATTTTAACCTCGCACCAAAACATAAATTTCTGCGTATGCCGATCTCTTTCACCAAAATCTGTGCTTAACAGCCGCCTTCTCTTCAATAATGGGCAAATGGCAATGCAACCATGATCACCAACCATTACACCCAAGCTATGTCGAAGATAGTCTCAGCCAGCATTACAAGCTCAGTGGAGATATGCTGGTTTTTAAGCTTTTGCTTAGTGAGGCAGCAACTGGTGCATGAGTCGATTAATCATCTCATAACTGGTGAACGTAATGACAGCATTCGGGGTTGTCCTTAGCAAATTCGTAGCACAACCTCTGTAGAAGCCGGGAATTCCCTCCTTCTGATACACTTGCTTGATACAGTCGATTACACCGGTGTAGTGCACAGCACCATGACGAGCACGACCTTGTTCTTGCAATTTAGATCGTACAACCTCATGGGGGTATGTTATTATTGAGGCCGCTACTTTAGATCCTGATGAACAAATAGCTAATTTTCCTGGGCTGAGCTTATCGACTGTAGTGTTGTCTCTTTTAGCAAAGTAAAGCTTCACATTCTCGTAGACTGGGAGCTGGATGGCCACATGAGTAACCCCAGCTAGAGAAGGAAGAAGACCACTATACAATCCACGGATACCTTCTTCTTCTGCAATCCGCCGTAAAGCAGACCAAATGCTTGTGTAAGGTACCACACCTGTCCTCATCCCTTGTGTTTGTAGCCTAGTCTTCACAACCCACAATGGATTAGTTGCAACAGCTGTTGCAATCCCGGCACATGAAGCAGCTAGAATATTTGCTTGGACAGACAATTCGCCAGTGTTATCACCTTGAGAATGAAGAAGACCCTTCAAGTGATTATAAACTGAAAACGTAACAGCCCATGTTGGAAACAATGCTACTATCGTTGGTGAAAGGCCACGATACAACCCAGGCAGGCCTTCATTTTTTAATATGTGCTGAAAACCTGAAATTATTACCCTACCAGGTGGCGCCGTGCTAGAGAGGTTGGAAGGGAGGCCGTACACCTGCAGCCGCGTCTTGATCACGTCCAGCGGGCACAGCACCGTTGCGGAGATCACACCAGCCGAACCGCCCGCGATGGCGTTGCAGGCCGCCTCCCGGACCATCACTCGCGCGCCGTTACCTCCCCTGCCCTCCGACATCGCGGCGCCCGAGAAGCCGCGGGGGGAGGCAGCCCAGGAGCTAGGAAGCTGCAGCAGACAAGAGAGGGACGAGACCGTCTCCCTCGGTCAGGGCGAAGTCGACCACCGGAAATGGCGGCGGCGGCGGCGGCGGCGGAGGACGCGCTCCGTCCCCCGCGGTGGGAGGCCCCGGCCGGATCCGGGCGGGCGGCCGGGCGGGATGCCACGCGCCGGGCGACGGGGGGAGCGCCGCCCGCTCCCTCAACGCGGCTTGGGACACTCGCTTGGGAAACGGAAACTGGGGCCGCAGGGAGGCGGCGGCGGCAGCGGCGGAGGCGGAGGGGAGGGGCGACGCGGCCGGCGGTGTGGGAGGGGAACGGTCGAGGGGGGGACGGGGGAGGGAGGCGTCGGCGGCGGGGGGAGTTGGAACTTGGGAAGAGGGGGAAGGCGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0020800.1 | 1 | 18110502 | G | C |
| Osa01LNT0020800.1 | 1 | 18101635 | A | G |
| Osa01LNT0020800.1 | 1 | 18101896 | T | C |
| Osa01LNT0020800.1 | 1 | 18103116 | G | A |
| Osa01LNT0020800.1 | 1 | 18103749 | A | C |
| Osa01LNT0020800.1 | 1 | 18103978 | A | T |
| Osa01LNT0020800.1 | 1 | 18104044 | T | C |
| Osa01LNT0020800.1 | 1 | 18104510 | C | A |
| Osa01LNT0020800.1 | 1 | 18104557 | A | G |
| Osa01LNT0020800.1 | 1 | 18105138 | A | C |
| Osa01LNT0020800.1 | 1 | 18105431 | G | A |
| Osa01LNT0020800.1 | 1 | 18107517 | T | C |
| Osa01LNT0020800.1 | 1 | 18108184 | C | T |
| Osa01LNT0020800.1 | 1 | 18108323 | A | G |
| Osa01LNT0020800.1 | 1 | 18108376 | G | A |
| Osa01LNT0020800.1 | 1 | 18108643 | T | A |
| Osa01LNT0020800.1 | 1 | 18109025 | A | C |
| Osa01LNT0020800.1 | 1 | 18109460 | T | A |
| Osa01LNT0020800.1 | 1 | 18110057 | A | G |
| Osa01LNT0020800.1 | 1 | 18110213 | C | T |
| Osa01LNT0020800.1 | 1 | 18110637 | T | C |
| Osa01LNT0020800.1 | 1 | 18111242 | T | C |
| Osa01LNT0020800.1 | 1 | 18102213 | A | G |
| Osa01LNT0020800.1 | 1 | 18106866 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa01LNT0020800.1 | DTM_#DNAt_MULE_japo_Os0098 | Chr1 | - | 18106844 | 18107225 | 381 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0020800.1 | osa-miR5817 | Translation | 5.0 | 16.74 | 1 | 24 |
| Osa01LNT0020800.1 | osa-miR390-5p | Cleavage | 5.0 | 11.471 | 1 | 21 |
| Osa01LNT0020800.1 | osa-miR5075 | Cleavage | 5.0 | 19.281 | 1 | 21 |
| Osa01LNT0020800.1 | osa-miR5075 | Cleavage | 4.5 | 13.128 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0020800.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0020800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0020800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0020800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0020800.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0020800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0020800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)